BAC Information

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BAC

Clone NameB6Ng01-184H22
Chromosome4 (Build37)
Map Location 146,766,066 - 146,957,479
singlet/doubletdoublet
Overlap geneLOC627701, OTTMUSG00000010671, LOC545718, OTTMUSG00000010673
Upstream geneRex2, LOC100043012, LOC100041461, LOC630093, OTTMUSG00000010105, LOC666445, MGC117846, OTTMUSG00000010694, LOC626480, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498, LOC100043034, LOC666514, LOC100041561, LOC100041570, OTTMUSG00000010657, LOC384087, LOC666546, LOC666557, LOC545716, LOC666574, LOC666581, EG666588
Downstream gene2610305D13Rik, LOC666618, LOC100043100, LOC666640, LOC194189, LOC666652, LOC100041677, LOC277692, MGC67181, D4Wsu114e, Fv1, Mfn2, Plod1, 2510039O18Rik, Nppb, Nppa, Clcn6, Mthfr, LOC433806, Agtrap, 2610109H07Rik, Mad2l2, Fbxo6, Fbxo44, Fbxo2, Ptchd2, Ubiad1, Frap1, Angptl7, Exosc10, LOC100043151
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-184H22.bB6Ng01-184H22.g
ACCGA009855GA009856
length7911,154
definitionB6Ng01-184H22.b B6Ng01-184H22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(146,956,351 - 146,957,479)(146,766,066 - 146,766,749)
sequence
gaattccctgatgaatactaagatggatctgatgggtaaagcatttgtca
cttttactactttcgtaaggtttctttccatgataaattctctgctgact
ttgtagtttttctctctgggtaagatatttgtgaaattcactacatttgt
aagggttccctgcaatattgttttttttcaccacgactttatgtttagaa
acaaaaaccttctctaattctgcatttcggttgtgttttttcttctgcat
gttaattccttgattgagactaatggtagaaaacaaacttaaactgttta
caaagtgattgtatttgcaaacttctttagtgttcctgggcttaagtctt
ttttggttcgagaattgaagagcatcagagctgtgattagttttgtaagg
tgtacactggagggattcaagaatgacattgctaagcttgtcccatttag
aagacttctctcgaatattcatgtgttcatggacaatgtactggttgtct
tgatccaataccttcccattctttccacgtatgcaataattttctgaaaa
aaaaagaggaggggggcaattagaggtgacatgaattacttatataagga
ggaagggactcaataatcagtgagcttatggattcttactctcaagaaag
gtttctctcaacaatatcaagacccacaaagctctcaagggtcaaatcac
caaataaagagtacacatggaagtacaaatggctccagctttatatatac
cagaggattgccttatgtggcatcaacaggaggggagtccc
gaattcatacaggagagaaaccttacaaatgtaatgaatgtgacaaatgc
tttacctgaaaatcacatcttagtattcatcagataattcatacagaaga
gaaaccttacaaatgtagtgaatgtgacaaatcctttactgaaaatggct
gtctgagaattcatcagagaattcatacaggagagaaaccttacaaatgt
agtgaatgtgacaaatgctttactaaaaaatccagtttgaggattcatca
gagatttcatacaggagagaaaccttacaaatgtagtgaatgtgacaaat
gttttattcaaaaatgcagtctgataattcatcagagaattcatacagga
gagaaaccttacaaatgtagtgaatgtgacaaagctttactgagaaagtc
aatctgagaaggcatcagagaactcatacaggggagaattcttacaaatg
tattgaatgtgacaaatgttttgcccagaaatcctatcttgtttttaatc
acagaaatcatacattaaagaagccttacaaatgcagtcaatgtgacaaa
tgattttcccacaaacttagtctgagaatgcatcagagaattcatacagt
agagaaaacttacaaaaatgcagtgaatgtgataaatgctttactaataa
aggcagactgagaattaatcagataatttatacatttaaaaaaaccctta
caagtattttgtatgtgataaatgcagtacccacaacatcagtctgacaa
atcaacagatatttcaaacagtagagcaacattataaatgaaatgaatga
gatagtcctttaacaagaaatatcatcttaaaattcactggagaattctt
ccaaaagggaaacatttcaaatacattgacggtttgaatcctttattttg
gcctatctcttagaatgtaatagataatttatacagggcaagaatcttaa
caaatataatatatgctgaaatatctttgacttcattcagtgcagaaaaa
atatgtaaaaaatttttttttatgggaaaaataagttctcctgagaaatg
gtgggcatatgttttacaacggtaatattcttttccacagttcagtgctc
ttaacctagagataattatgaatcttgaaaaactttgaacttcatgccat
gttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_146956351_146957479
seq2: B6Ng01-184H22.b_48_838 (reverse)

seq1  GGGACTCCCCTCCTGTTGATGCCACATAAGGCAATC--CTGCTATATATA  48
      ||||||||||||||||||||||||||||||||||||  ||| ||||||||
seq2  GGGACTCCCCTCCTGTTGATGCCACATAAGGCAATCCTCTGGTATATATA  50

seq1  AAGCTGGAGCCATTTGTACTTCCATGTGTACTCTTTATTTGGTGATTTGA  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGGAGCCATTTGTACTTCCATGTGTACTCTTTATTTGGTGATTTGA  100

seq1  CCCTTGAGAGCTTTGTGGGTCTTGATATTGTTGTTCCTCCTACACAGTTG  148
      ||||||||||||||||||||||||||||||||                  
seq2  CCCTTGAGAGCTTTGTGGGTCTTGATATTGTT------------------  132

seq1  CAAAGCCCTTCAGCTTCTTCAGTCCTTCCCTTAACTCCTTCATTGTGGTC  198
                                                        
seq2  --------------------------------------------------  132

seq1  CCCTTGCTCAGTCCAATGGTTGGCTGCAAGGATCTGCATCCTTTTCATCC  248
                                                        
seq2  --------------------------------------------------  132

seq1  AGTCTCTGGATGGCCTTCCCTTCAGCCTCTTTTCCATTCTTTGTCCCTCT  298
                                                        
seq2  --------------------------------------------------  132

seq1  TTTTCCTTAAGACAGGAGCAATTCTGGGTTATTATATTTGAGGTGGTATG  348
                                                        
seq2  --------------------------------------------------  132

seq1  ATGTCTAATTTGAAAATAAAATTTAGCAGGCTATTATCATTTCCAGTCAT  398
                                                        
seq2  --------------------------------------------------  132

seq1  TTGATATAGATCATATTTGAGGTTCTTCTGAGGATACATGTAGTGATTTA  448
                                                        
seq2  --------------------------------------------------  132

seq1  AAAAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGACCTCTCTTGAGAGTAC  498
                                |||||| |||| ||||||||||| 
seq2  --------------------------GAGAGAAACCTTTCTTGAGAGTAA  156

seq1  GAATCCATAAGCTCACTGATTATTGAGTCCCTTACTCCTTATATAAGTAA  548
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GAATCCATAAGCTCACTGATTATTGAGTCCCTTCCTCCTTATATAAGTAA  206

seq1  TTCATGTCATCTCTAATTGCCCCATTTTGTTTTTGTTTTTTCAGAAAATC  598
      ||||||||| |||||||||||||    |  | || |||||||||||||| 
seq2  TTCATGTCACCTCTAATTGCCCC--CCTCCTCTTTTTTTTTCAGAAAATT  254

seq1  ATTGCATACGTGGAAAGTATAGGAAGGTCTTGGATCAAGACAGCCAGTAC  648
      ||||||||||||||||| || ||||||| ||||||||||||| |||||||
seq2  ATTGCATACGTGGAAAGAATGGGAAGGTATTGGATCAAGACAACCAGTAC  304

seq1  ATTGTCCATGAACACATGAATATTCAAGAGAAGTCTTCTAAATGGGACAA  698
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  ATTGTCCATGAACACATGAATATTCGAGAGAAGTCTTCTAAATGGGACAA  354

seq1  GCTTAGCAAGGTGCTTCTTGATTCCCCCCAATATACACCTTACAAAACTT  748
      ||||||||| ||  ||||||| |||| ||| | |||||||||||||||| 
seq2  GCTTAGCAATGTCATTCTTGAATCCCTCCAGTGTACACCTTACAAAACTA  404

seq1  ATCACAGCT------CTCTTCAATACTGGAACCAAAAAAGACTTAAGCCC  792
      |||||||||      ||||||||| || ||||||||||||||||||||||
seq2  ATCACAGCTCTGATGCTCTTCAATTCTCGAACCAAAAAAGACTTAAGCCC  454

seq1  AGGAACACTAAAGAAGTTTGCAAATACAATGACTCTGTAAACAGTGTAAG  842
      |||||||||||||||||||||||||||||| ||| |||||||||| ||||
seq2  AGGAACACTAAAGAAGTTTGCAAATACAATCACTTTGTAAACAGTTTAAG  504

seq1  TTTGTTTTCTACCATTAGTCTCAATCAAGGAATCCACATGCAGAAGAAAA  892
      |||||||||||||||||||||||||||||||||  |||||||||||||||
seq2  TTTGTTTTCTACCATTAGTCTCAATCAAGGAATTAACATGCAGAAGAAAA  554

seq1  AACACAAGCGAAATGCAGAATTTGAGAAGGTTTTTGTTTCTAAACATAAA  942
      ||||||| |||||||||||||| |||||||||||||||||||||||||||
seq2  AACACAACCGAAATGCAGAATTAGAGAAGGTTTTTGTTTCTAAACATAAA  604

seq1  GACATGGTGAAACAAAAAAATACTGGAGTGAACCCTTACAAATGCAGTGA  992
      | | |||||||| |||| |||| || || ||||||||||||||| |||||
seq2  GTCGTGGTGAAAAAAAACAATATTGCAGGGAACCCTTACAAATGTAGTGA  654

seq1  ATTTCACAAATATCTTACCCAGAGAGAAAAACTTCAAACTCAGCAGAGAA  1042
      ||||||||||||||||||||||||||||||||| |||| |||||||||||
seq2  ATTTCACAAATATCTTACCCAGAGAGAAAAACTACAAAGTCAGCAGAGAA  704

seq1  TTTATCATGGAAAGAAACCTTACAAAAGTAGTAAAAGTGACAAATGCTTT  1092
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TTTATCATGGAAAGAAACCTTACGAAAGTAGTAAAAGTGACAAATGCTTT  754

seq1  ACCCATCAGATCCATCTTAGAAGTCATCAGGGAATTC  1129
      |||||||||||||||||||| | ||||||||||||||
seq2  ACCCATCAGATCCATCTTAGTATTCATCAGGGAATTC  791

seq1: chr4_146766066_146766749
seq2: B6Ng01-184H22.g_532_1220

seq1  ATGTTTTGCCCAGAAATCCTATCTTGTTTTTAATCACAGAAATCATACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTTGCCCAGAAATCCTATCTTGTTTTTAATCACAGAAATCATACAT  50

seq1  TAAAGAAGCCTTACAAATGTAGTCAATGTGACAAATGATTTTCCCACAAA  100
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TAAAGAAGCCTTACAAATGCAGTCAATGTGACAAATGATTTTCCCACAAA  100

seq1  CTTAGTCTGAGAATGCATCAGAGAATTCATACAGTAGAGAAAATTTACAA  150
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CTTAGTCTGAGAATGCATCAGAGAATTCATACAGTAGAGAAAACTTACAA  150

seq1  AAATGCAGTGAATGTGATAAATGCTTTACTAATAAAGGCAGACTGAGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCAGTGAATGTGATAAATGCTTTACTAATAAAGGCAGACTGAGAAT  200

seq1  TAATCAGATAATTTATACATTTAAAAAAAAACCTTACAAGTATTTTGTAT  250
      |||||||||||||||||||||| ||||||| |||||||||||||||||||
seq2  TAATCAGATAATTTATACATTT-AAAAAAACCCTTACAAGTATTTTGTAT  249

seq1  GTGATAAATGCAGTACCCACAACATCAGTCTGACAAATCAACAAATATTT  300
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GTGATAAATGCAGTACCCACAACATCAGTCTGACAAATCAACAGATATTT  299

seq1  CAAACAGTAGAGCAACATTATAAATGAAATGAATGAGATAATCCTTTAAC  350
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CAAACAGTAGAGCAACATTATAAATGAAATGAATGAGATAGTCCTTTAAC  349

seq1  AAGAAATATCATCTTAAAATTCACTGGAGAATTCTTCCAAAAGGGAAACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AAGAAATATCATCTTAAAATTCACTGGAGAATTCTTCCAAAAGGGAAACA  399

seq1  TTTCAAATACATTGATGGTTTGAATCCTTTATTTTGGCCTATCTCTTAGA  450
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TTTCAAATACATTGACGGTTTGAATCCTTTATTTTGGCCTATCTCTTAGA  449

seq1  ATGTAACAGATAATTTATACA-GGCAAGAATCTTAACAAATATAATATAT  499
      |||||| |||||||||||||| ||||||||||||||||||||||||||||
seq2  ATGTAATAGATAATTTATACAGGGCAAGAATCTTAACAAATATAATATAT  499

seq1  GCTGAAATATCTTTGACTTCATTTCAGTGCAGAAAAAATATGT--AAAAT  547
      ||||||||||||||||||||| |||||||||||||||||||||  |||||
seq2  GCTGAAATATCTTTGACTTCA-TTCAGTGCAGAAAAAATATGTAAAAAAT  548

seq1  ATTTTTTTATGGGAAAAA-AAGTTCTCCTGGGGAAATGT-GGCATATGTT  595
       ||||||||||||||||| ||||||||||| | ||  || ||||||||||
seq2  TTTTTTTTATGGGAAAAATAAGTTCTCCTGAGAAATGGTGGGCATATGTT  598

seq1  TTACACGGGTAATATTCTTTTCAACAGTT-AGTGCTC-TAAACTAGAG--  641
      |||||  ||||||||||||||| |||||| ||||||| ||| ||||||  
seq2  TTACAACGGTAATATTCTTTTCCACAGTTCAGTGCTCTTAACCTAGAGAT  648

seq1  AATTATGAATC-TGAAAACTTTTGAAAACCTTCATGCAATGTTC  684
      ||||||||||| ||||||  ||||||   |||||||| ||||||
seq2  AATTATGAATCTTGAAAAACTTTGAA---CTTCATGCCATGTTC  689