BAC Information

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BAC

Clone NameB6Ng01-185H19
Chromosome4 (Build37)
Map Location 74,245,138 - 74,245,881
singlet/doubletsinglet
Overlap genenone
Upstream geneOTTMUSG00000000281, OTTMUSG00000000280, OTTMUSG00000000282, OTTMUSG00000000283, Gm428, Rasef, LOC667768, LOC545637, LOC623272, OTTMUSG00000014862, OTTMUSG00000004010, 2310002L09Rik, Frmd3, LOC100039774, Jmjd2c, LOC100040258
Downstream geneLOC100039814, LOC636847, 3110001D03Rik, LOC623529, LOC100039833
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-185H19.bB6Ng01-185H19.g
ACCGA010581GA010582
length1,192901
definitionB6Ng01-185H19.b B6Ng01-185H19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacatgataaaagcaatcaacagcaaacga
gtagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctaccttttcaacatag
tacttgaagtattagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaagaggaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattctaccagagaactcctaaacc
tgataaacagcttcggtgaagtagctggatataaaataaactcaaacaag
tcaatggcctttctgtatacaaagaataaacaggctgagaaagaaattag
ggaaacaacacccttctcaatagtcacaaataatataaaatatcttggcg
tgactctaactaaggaggtgaaagatctgtatgataaaaacttcaaatct
ctgaagaaagaaattaaaaaagatctcagaacatggaaagatctcccatg
ctcatggattggcaggatcaacattgtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccatcaaaattccaactcaattcttc
aaagaattagaaggagcaatttgcaaattcatctggaataacaaaaaacc
taggattgcaaaaagtcttctcaaggataaaagaacctctggtggaatca
ccatgcctgacctaaagctttactacagagcaattgtgataaaaactgca
tggtactggtatagagacagacaagtagaccaatgcaacagaattgaaga
cccagaaatgaacccacacacctatggtcacttgatcttcgacaagggag
ctaaatccatccagtggaagaaggacagcattttcaacaattggtgctgg
cacactgggttgttatcatgttagaagatgcgaatcgatccatactttat
ctctttgtactaagtcaaatctagtggatcaaggaacttcatataaaaca
gagacactgaaactttatagaggagaaaggtgggtaaaggctttgaagaa
tatgggcacaggtaaaattcctgaaccagaacatcaattgactgtgcctg
taagatcgagatgacaaatggtaccttaaatgaaactctccc
gaattcttttatctttgtctttcttttgacaaggaagcaatatttgtggt
gtcgaaaacatacactgggaatcatcaaagacaagaaaggagaagtgaat
aaaaaagaatatgagaggcaaaagatgggaggaggtccagcaaaagaaaa
gaaaagcagccttagcaggttacagttaatgatggaaccgcatataagca
tagcttttaaagtaatttaaggttccgaaatgcttctttttttttaattt
ttttccattttttattaggtatttagctcatttacatttccaatgctata
ccaaaagtcccccatacccacccacccccactcccctacccacccactcc
ccctttttggccctggcgttcccctgtactggggcatacaaagtttgcgt
gtccaatgggcctctctttccagtgatggccgattaggccatcttttgat
acatatgcagctagagtcaagagctccggggtactggttagttcataatg
ttgttccacctatagggttgcagatccctttagctccttgggttctttct
ctagctcctccattgggagccctgtgatccatccattagctgactgtgag
catccacttctgtgtttcctaggccccggcatagtctcacaaaaaatctt
gctagggtatgcaatggtgtcagcgtttggatgctgattatggggtggat
ccctggatatggcagtctctacatggccatcctttcatctcagctccaaa
cttttgtctctgtaacttccttccatgggagttttgttcccaattctcag
gaggggcatagtgtcccacacatcatcatcattcgtcatgagtttcatgt
gtttagcaaattgtaccttatatcttaggaatccttaagttggggcttaa
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_74245138_74245881
seq2: B6Ng01-185H19.g_60_803

seq1  GAATTCTTTTATCTTTGTCTTTCTTTTGACAAGGAAGCAATATTTGTGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTATCTTTGTCTTTCTTTTGACAAGGAAGCAATATTTGTGGT  50

seq1  GTCGAAAACATACACTGGGAATCATCAAAGACAAGAAAGGAGAAGTGAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGAAAACATACACTGGGAATCATCAAAGACAAGAAAGGAGAAGTGAAT  100

seq1  AAAAAAGAATATGAGAGGCAAAAGATGGGAGGAGGTCCAGCAAAAGAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGAATATGAGAGGCAAAAGATGGGAGGAGGTCCAGCAAAAGAAAA  150

seq1  GAAAAGCAGCCTTAGCAGGTTACAGTTAATGATGGAACCGCATATAAGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGCAGCCTTAGCAGGTTACAGTTAATGATGGAACCGCATATAAGCA  200

seq1  TAGCTTTTAAAGTAATTTAAGGTTCCGAAATGCTTCTTTTTTTTTAATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTTTAAAGTAATTTAAGGTTCCGAAATGCTTCTTTTTTTTTAATTT  250

seq1  TTTTCCATTTTTTATTAGGTATTTAGCTCATTTACATTTCCAATGCTATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCATTTTTTATTAGGTATTTAGCTCATTTACATTTCCAATGCTATA  300

seq1  CCAAAAGTCCCCCATACCCACCCACCCCCACTCCCCTACCCACCCACTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAAGTCCCCCATACCCACCCACCCCCACTCCCCTACCCACCCACTCC  350

seq1  CCCTTTTTGGCCCTGGCGTTCCCCTGTACTGGGGCATACAAAGTTTGCGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTTTGGCCCTGGCGTTCCCCTGTACTGGGGCATACAAAGTTTGCGT  400

seq1  GTCCAATGGGCCTCTCTTTCCAGTGATGGCCGATTAGGCCATCTTTTGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAATGGGCCTCTCTTTCCAGTGATGGCCGATTAGGCCATCTTTTGAT  450

seq1  ACATATGCAGCTAGAGTCAAGAGCTCCGGGGTACTGGTTAGTTCATAATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATGCAGCTAGAGTCAAGAGCTCCGGGGTACTGGTTAGTTCATAATG  500

seq1  TTGTTCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTGGGTTCTTTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTGGGTTCTTTCT  550

seq1  CTAGCTCCTCCATTGGGAGCCCTGTGATCCATCCATTAGCTGACTGTGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCTCCTCCATTGGGAGCCCTGTGATCCATCCATTAGCTGACTGTGAG  600

seq1  CATCCACTTCTGTGTTTCCTAGGCCCCGGCATAGTCTCAC-AAAAATCTT  649
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CATCCACTTCTGTGTTTCCTAGGCCCCGGCATAGTCTCACAAAAAATCTT  650

seq1  GCTAGGGTATGCAATGGTGTCAGCGTTTGGATGCTGATTATGGGGTGGAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGGGTATGCAATGGTGTCAGCGTTTGGATGCTGATTATGGGGTGGAT  700

seq1  CCCTGGATATGGCAGTCTCTACATGGTCCATCCTTTCATCTCAGC  744
      |||||||||||||||||||||||||| ||||||||||||||||||
seq2  CCCTGGATATGGCAGTCTCTACATGG-CCATCCTTTCATCTCAGC  744