BAC Information

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BAC

Clone NameB6Ng01-185I17
Chromosome4 (Build37)
Map Location 96,847,541 - 96,848,035
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC546837, Cyp2j11, LOC665095, Cyp2j6, Cyp2j9, Cyp2j5, LOC100039415, LOC620779
Downstream geneLOC620883, EG638698, Nfia, LOC100039459, LOC669426
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-185I17.bB6Ng01-185I17.g
ACCGA010625GA010626
length505481
definitionB6Ng01-185I17.b B6Ng01-185I17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
cagcaacaaagttagccccttgcattgggctttctgcatgacggagtagc
tccagtatgttgctacaggtagggctatagaactctggggattcagcagc
ttgtgagggaatttctgcacattctgtagaccaggttcgatggcaaatag
tgaagttgttgagtaagcccttctagaaaatgagaaaagatggcaagaca
aacaaacaaacaagaaacctagtacaaatggaaaggactcaataagcaag
agtgataggactagaagaagagagaaagaaggccaattacagcaatataa
ctctgcagagatatacatggagcttgtttgccactgtggacacgtgtacc
tgtgtgtatctctctctctctctctctctctctctctctctctctctctc
tctctctctttcatacacacacatggagagagagagagagggagagagag
agagagagagagagagagagagagagagagacagatacgcgtgtgcggag
agaga

aaaacagaggaatctcgaatggctgagaagcacttaaagaaatgttcaaa
gtccttagtgatcagagaaatgcaaatcaaatcaaccctgagattccatc
ttaaacctatgagaatggctaagatcaaaacttcaggtgacagcaatgtt
ggcaaggatgtggagaaagaggaacactcctccattgctggtgggattgc
aaactggtacaaccactccagaaatcaatctggagattcctcagaaaatt
caagatagatctacctgaagatatgtcttaggcatatacctaaaagatac
ttcaccacgccacaggggctcatgtccctctatgttcctagcaaccttgt
ttgtgatagtcataggctagaaacaatctagatgtcccacaacagaaaaa
cggaaacctaaaatgtggtgggtgggagtacaggggcatccttgtagaga
cagggttggggggagggaagtatgggatatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_96847541_96848035
seq2: B6Ng01-185I17.b_46_556 (reverse)

seq1  TCTCTCTC----------------TCTCCCTCTCTCTCTCTCTCTCTCTC  34
      ||||||||                |||| |||||||||||||||||||||
seq2  TCTCTCTCCGCACACGCGTATCTGTCTCTCTCTCTCTCTCTCTCTCTCTC  50

seq1  TCTCTCTCTCTCTCCCTCTCTCTCTCTCTCCATGTGTGTGTATGAAAGAG  84
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCCCTCTCTCTCTCTCTCCATGTGTGTGTATGAAAGAG  100

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATAC  134
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATAC  150

seq1  ACACAGGTACACGTGTCCACAGTGGCAAACAAGCTCCATGTATATCTCTG  184
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGGTACACGTGTCCACAGTGGCAAACAAGCTCCATGTATATCTCTG  200

seq1  CAGAGTTATATTGCTGTAATTGGCCTTCTTTCTCTCTTCTTCTAGTCCTA  234
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTTATATTGCTGTAATTGGCCTTCTTTCTCTCTTCTTCTAGTCCTA  250

seq1  TCACTCTTGCTTATTGAGTCCTTTCCATTTGTACTAGGTTTCTTGTTTGT  284
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCTTGCTTATTGAGTCCTTTCCATTTGTACTAGGTTTCTTGTTTGT  300

seq1  TTGTTTGTCTTGCCATCTTTTCTCATTTTCTAGAAGGGCTTACTCAACAA  334
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTGTCTTGCCATCTTTTCTCATTTTCTAGAAGGGCTTACTCAACAA  350

seq1  CTTCACTATTTGCCATCGAACCTGGTCTACAGAATGTGCAGAAATTCCCT  384
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACTATTTGCCATCGAACCTGGTCTACAGAATGTGCAGAAATTCCCT  400

seq1  CACAAGCTGCTGAATCCCCAGAGTTCTATAGCCCTACCTGTAGCAACATA  434
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGCTGCTGAATCCCCAGAGTTCTATAGCCCTACCTGTAGCAACATA  450

seq1  CTGGAGCTACTCCGTCATGCAGAAAGCCCAATGCAAGGGGCTAACTTTGT  484
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGCTACTCCGTCATGCAGAAAGCCCAATGCAAGGGGCTAACTTTGT  500

seq1  TGCTGGAATTC  495
      |||||||||||
seq2  TGCTGGAATTC  511


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