BAC Information

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BAC

Clone NameB6Ng01-185L02
Chromosome4 (Build37)
Map Location 73,937,218 - 73,938,219
singlet/doubletsinglet
Overlap geneJmjd2c
Upstream geneOTTMUSG00000001246, LOC100039726, LOC667722, LOC623115, OTTMUSG00000000281, OTTMUSG00000000280, OTTMUSG00000000282, OTTMUSG00000000283, Gm428, Rasef, LOC667768, LOC545637, LOC623272, OTTMUSG00000014862, OTTMUSG00000004010, 2310002L09Rik, Frmd3, LOC100039774
Downstream geneLOC100040258, LOC100039814, LOC636847, 3110001D03Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-185L02.bB6Ng01-185L02.g
ACCGA010736GA010737
length1,2211,004
definitionB6Ng01-185L02.b B6Ng01-185L02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccatgacgatagataaggcattctgtcagtccgtgaatggtggtt
ttagcagaggcattacgtgcaggaaaggcaaatccataaccagaataagt
atctactccagtaagaacaaaacgctgtcctttccacgaaggaagtggtc
caatgtagtcaacctgccaccaggttgctggctggtcacctcgaggaatg
gtgccatatctggggctcagtgtcggtttctgctgttggcagatctggca
atcagcagcagctgtagccaggtcagctttggtgagtggaagcccgtgtt
gctgagcccaagcataacctccatctcgaccaccatggccactttgttca
tgtgcccattgagcaatgacagggatggctggggagagaggctgactgtc
cacagaacgggtcatcttatccacttgattattgaactcctcctcggctg
aagtcaccttttggtgagcatttacatgggacacaaatatcttcacatcc
tttgcccatttggagagatctatccacatacttcttccccagatgtcttt
ctcaccaattttccaattgtgatctttccaagtccctgaccatccagcca
atccattggctacagcccatgagtcagtgaataatcgtacatctggccac
ttcttcttacaaacaaactgtaataccatgtgtactgcccgaagttctgc
ccactgtgaagatttcccttcacctgtgtctttcaaggttgtcccagaaa
ggggttgtaatgctgcagctgtccacttctgggtggtgcctgcataacgt
gcagagccatcagtaaaccaggctctagtcttctcctcttcggtcagttg
atcatagggaacaccccatgaggctataggcgcatgcttggcagcagatg
gcattgtaacaggagtagaaaccataggcatttgagcacttcttcattgt
aacttgcttgtgccttcaggacctgctctggcccgatcaacgtatatacc
actttccatttgataatagactgctgctgtgcgccgtccactttattgac
ttgcagggtctgatagtacccaggctcatgatgggttagtttcagtcgca
tagtactttggtgtccttattgtccaacgttcagtttcacttaaaggtca
tatgccaggtcagacctgtttttccatgggagagaaatagatgctctgtc
caggaatggatggcatgagac
gaattccttatagtatcctctgtagagctggcgtgatgtacattagtttt
tataatgaactattttaatttctccctcagtcatgatagacagaattgct
acatattgtagtctgggttggcacttgtggtattctagaatgttcaatgc
atatgaccttctggcttttaaattttagttgaggggttatttgttattct
gatggtcctgcctttgtatgtgatttgatggttttctattgtagctctta
tacacatcccttgttcaatatatttagtgttttaactatggatatgtcat
gtgggttttggtttcttgttccagttgctttttaaaataccttttatatg
tggatgagcccttgtttcttaggtttgaggttttatttatttatttattt
atttatttattgattgttacaattatcttaaaatgctctatccttttgga
ataaattaacttcttagagtcatgcccttcatcctttgagttttgccctt
gtccatttttctacttcagacttctgagggttggacctaggacttcacac
atgctaggcaaatgtgctacactgcacctcatctccaggtgtttgcatga
tgcctacaagagtttcctgttctgtcatgttataaaaattttattatttt
cttttcagtgtaccaattcctctacctcttcctaaaacattttcacttga
ctttattgaaatttttatttttaccatcatttcatttggtgtttcttcaa
tatttgtctttattgaattccattctttatatcctgtattgacctccttt
tttttattcagttgtcttttttcccttgtagtttattcatatcacctttc
atttctttttttcttttttaaaagacttatttggttgcttatttatgtat
gcgagtacactgtagctgacttgagacacacagaagaaggcattggatcc
cattactgatggttggtgagtcaccatgggtgctgaagaattgacactca
ggac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_73937218_73938219
seq2: B6Ng01-185L02.g_68_1071

seq1  GAATTCCTTATAGTATCCTCTGTAGAGCTGGCGTGATGTACATTAGTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTATAGTATCCTCTGTAGAGCTGGCGTGATGTACATTAGTTTT  50

seq1  TATAATGAACTATTTTAATTTCTCCCTCAGTCATGATAGACAGAATTGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATGAACTATTTTAATTTCTCCCTCAGTCATGATAGACAGAATTGCT  100

seq1  ACATATTGTAGTCTGGGTTGGCACTTGTGGTATTCTAGAATGTTCAATGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATTGTAGTCTGGGTTGGCACTTGTGGTATTCTAGAATGTTCAATGC  150

seq1  ATATGACCTTCTGGCTTTTAAATTTTAGTTGAGGGGTTATTTGTTATTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGACCTTCTGGCTTTTAAATTTTAGTTGAGGGGTTATTTGTTATTCT  200

seq1  GATGGTCCTGCCTTTGTATGTGATTTGATGGTTTTCTATTGTAGCTCTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTCCTGCCTTTGTATGTGATTTGATGGTTTTCTATTGTAGCTCTTA  250

seq1  TACACATCCCTTGTTCAATATATTTAGTGTTTTAACTATGGATATGTCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACATCCCTTGTTCAATATATTTAGTGTTTTAACTATGGATATGTCAT  300

seq1  GTGGGTTTTGGTTTCTTGTTCCAGTTGCTTTTTAAAATACCTTTTATATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTTTTGGTTTCTTGTTCCAGTTGCTTTTTAAAATACCTTTTATATG  350

seq1  TGGATGAGCCCTTGTTTCTTAGGTTTGAGGTTTTATTTATTTATTTATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGAGCCCTTGTTTCTTAGGTTTGAGGTTTTATTTATTTATTTATTT  400

seq1  ATTTATTTATTGATTGTTACAATTATCTTAAAATGCTCTATCCTTTTGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTTATTGATTGTTACAATTATCTTAAAATGCTCTATCCTTTTGGA  450

seq1  ATAAATTAACTTCTTAGAGTCATGCCCTTCATCCTTTGAGTTTTGCCCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATTAACTTCTTAGAGTCATGCCCTTCATCCTTTGAGTTTTGCCCTT  500

seq1  GTCCATTTTTCTACTTCAGACTTCTGAGGGTTGGACCTAGGACTTCACAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCATTTTTCTACTTCAGACTTCTGAGGGTTGGACCTAGGACTTCACAC  550

seq1  ATGCTAGGCAAATGTGCTACACTGCACCTCATCTCCAGGTGTTTGCATGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTAGGCAAATGTGCTACACTGCACCTCATCTCCAGGTGTTTGCATGA  600

seq1  TGCCTACAAGAGTTTCCTGTTCTGTCATGTTATAAAAATTTTATTATTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTACAAGAGTTTCCTGTTCTGTCATGTTATAAAAATTTTATTATTTT  650

seq1  C-TTTCAGTGTACCAATTCCTCTACCTCTTCCTAAAACATTTTCACTTGA  699
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCAGTGTACCAATTCCTCTACCTCTTCCTAAAACATTTTCACTTGA  700

seq1  CTTTATTGAAATTTTTATTTTTACCATCATTTCATTTGGTGTTTCTTCAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATTGAAATTTTTATTTTTACCATCATTTCATTTGGTGTTTCTTCAA  750

seq1  TATTTGTCTTTATTGAATTCCATTC-TTATATCCTGTATTGACCTCC-TT  797
      ||||||||||||||||||||||||| ||||||||||||||||||||| ||
seq2  TATTTGTCTTTATTGAATTCCATTCTTTATATCCTGTATTGACCTCCTTT  800

seq1  TTTTTATTCAGTTGTCTTTTTTCCCTTGTAGTTTATTCATATCACCTTTC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATTCAGTTGTCTTTTTTCCCTTGTAGTTTATTCATATCACCTTTC  850

seq1  ATTTCTTTTTTTCTTTTTTTAAAGACTTATTTGTTTGCTTATTTAATGTA  897
      ||||||||||||||||||| ||||||||||||| |||||||||| |||||
seq2  ATTTCTTTTTTTCTTTTTTAAAAGACTTATTTGGTTGCTTATTT-ATGTA  899

seq1  TGCGAGTACACTGTAGCTGACTTGAGACACACCAGAAGAAGGCATTGGAT  947
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TGCGAGTACACTGTAGCTGACTTGAGACACA-CAGAAGAAGGCATTGGAT  948

seq1  CCCATTACAGATGGTT-GTGAGTCACCATGTGGTTGCTG-AGAATTGA-A  994
      |||||||| ||||||| |||||||||||  ||| ||||| |||||||| |
seq2  CCCATTACTGATGGTTGGTGAGTCACCA--TGGGTGCTGAAGAATTGACA  996

seq1  CTCAGGAC  1002
      ||||||||
seq2  CTCAGGAC  1004