BAC Information

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BAC

Clone NameB6Ng01-186A01
Chromosome4 (Build37)
Map Location 70,258,987 - 70,343,503
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC622491, LOC433716, LOC100039888, LOC242497, LOC671064, Cdk5rap2, Megf9
Downstream geneLOC100039565, LOC100039979, LOC667638
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-186A01.bB6Ng01-186A01.g
ACCGA010962GA010963
length9351,075
definitionB6Ng01-186A01.b B6Ng01-186A01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(70,258,987 - 70,259,878)(70,342,424 - 70,343,503)
sequence
gaattctctcatgctcatcttggggcaacaagatcttggggtatagaatt
tagtatttctttttgtttgtttgtttgtttgtttgtttttttcaaatttc
aaagtattttttatcataagaaatcaaaagagcttatactagcacacagc
aatactaacactgtgaataagtaataattcaaggcgtttcctgctcatac
agataatatgaagttttgatataaatgcaatttctcaatgaagaaaatat
catttaaccacttgctcttagctacaaaaatattttcataatagacaata
aaaaaaaacccagagaacatgaataaagctatttctgcagatggtgtgga
agaacagttttccaaatgtttctgatataaatgttttaataagtagcttt
tctttttttcttagatattttctttatttacatttcatatgtttttctct
ttcctggttttacctctgaaaactccctaccctcccccccccccacccga
cccccctgctcactaacccacccattcctacttcctggccctgacatttc
accatacgggggcatagaaccttcacaggaccaagagcctctcttcccat
tgatgagcaactaggccatcctctgctacatatgcagctagaacgatgaa
tcccaccatgtgttttctttagttggtggtttagccccagggagctctca
ggggtactggttatatagttgttcctcctatggagctacaaaccctttca
gctccttgggtactttctctagctcctttcattagggaccctgtgctctg
tccaatggttgggctgtgaacatccacttctgtattatttgtcaggcact
gggcagagactctcagaagacagcttatatcagtttctgtcagcaagctc
ttgttggcatccacaatagtgtctgggtttggtgg

gaattctttacaataaaatgttctttgatatatatatatatatatatata
tatatatatatatatatatatacatgtatatatatgcatatatatatgca
tttctttaaaaataaatgaaacaaaagaaaatctagcagttctgaagcca
ctaactgagcattccttgatctaattggactgttttatgtaattgtcttt
agtaacttgtgactgggaaacaaagtctgtagctgcttcatttacatttt
ttaacttattgtgtgctaatgttaccattttggaggatttaagacctgtg
tacgtataaaaatacaaacaatttttagataatttttatgggtaatggct
catttgaaaagcaggtttttagaggtcctaatcttaacccataattaaga
cacttaattatcttaaataagataattaggatatataattagtacagaac
accaaaaatttgaaagtaagaaagaaaaataattattttcaaaactactt
accatatggaaaggtttaagaaggcagattcaggcttttgatgatccata
aatataatttctctttacaatgtaatctgaacattatctcatactgtgtc
ttcagctttaagtcaagagaacattatttaggtaaaatacttgggaaaat
gttgaacttcctcactacaaacataaataggtgattctaaggtaaataaa
acagggcagagagataaatgcatgacataaaaagattttatttgtaacaa
agacaatttctaagctctgagtaagagagcttaattttccttctggtcaa
tacctacacctgcagtcagagataggtgtgccccaccccaatctcagcac
atctttcatcccaggaggcctgctccaacccaggatacccaggccagcca
accaaagacaaccagatggaaaaaggcagcacaaaacataatcacaaagt
cattacatatggcaccatcagatatagctctctactacagcagcttggga
taccctaacacatctgatagcacaccatggactttaattccaatctcatg
aagatgataagaggccttaagagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_70258987_70259878
seq2: B6Ng01-186A01.b_42_936

seq1  GAATTCTCTCATGCTCATCTTGGGGCAACAAGATCTTGGGGTATAGAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCATGCTCATCTTGGGGCAACAAGATCTTGGGGTATAGAATT  50

seq1  TAGTATTTCTTTTTGTTTGTTTGTTTGTTTGTTTGTTTTTTTCAAATTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTATTTCTTTTTGTTTGTTTGTTTGTTTGTTTGTTTTTTTCAAATTTC  100

seq1  AAAGTATTTTTTATCATAAGAAATCAAAAGAGCTTATACTAGCACACAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTATTTTTTATCATAAGAAATCAAAAGAGCTTATACTAGCACACAGC  150

seq1  AATACTAACACTGTGAATAAGTAATAATTCAAGGCGTTTCCTGCTCATAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTAACACTGTGAATAAGTAATAATTCAAGGCGTTTCCTGCTCATAC  200

seq1  AGATAATATGAAGTTTTGATATAAATGCAATTTCTCAATGAAGAAAATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAATATGAAGTTTTGATATAAATGCAATTTCTCAATGAAGAAAATAT  250

seq1  CATTTAACCACTTGCTCTTAGCTACAAAAATATTTTCATAATAGACAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAACCACTTGCTCTTAGCTACAAAAATATTTTCATAATAGACAATA  300

seq1  AAAAAAAACCCAGAGAACATGAATAAAGCTATTTCTGCAGATGGTGTGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAACCCAGAGAACATGAATAAAGCTATTTCTGCAGATGGTGTGGA  350

seq1  AGAACAGTTTTCCAAATGTTTCTGATATAAATGTTTTAATAAGTAGCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAGTTTTCCAAATGTTTCTGATATAAATGTTTTAATAAGTAGCTTT  400

seq1  TCTTTTTTTCTTAGATATTTTCTTTATTTACATTTCATATGTTTTTCTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTTTCTTAGATATTTTCTTTATTTACATTTCATATGTTTTTCTCT  450

seq1  TTCCTGGTTTTACCTCTGAAAACTCCCTACCCTCCCCCCCCCCCACCCGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGGTTTTACCTCTGAAAACTCCCTACCCTCCCCCCCCCCCACCCGA  500

seq1  CCCCCCTGCTCACTAACCCACCCATTCCTACTTCCTGGCCCTGACATTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCTGCTCACTAACCCACCCATTCCTACTTCCTGGCCCTGACATTTC  550

seq1  ACCATACGGGGGCATAGAACCTTCACAGGACCAAGAGCCTCTCTTCCCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATACGGGGGCATAGAACCTTCACAGGACCAAGAGCCTCTCTTCCCAT  600

seq1  TGATGAGCAACTAGGCCATCCTCTGCTACATATGCAGCTAGAACGATGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGAGCAACTAGGCCATCCTCTGCTACATATGCAGCTAGAACGATGAA  650

seq1  TCCCACCATGTGTTTTCTTTAGTTGGTGGTTTAGCCCCAGGGAGCTCTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACCATGTGTTTTCTTTAGTTGGTGGTTTAGCCCCAGGGAGCTCTCA  700

seq1  GGGGTACTGGTTATATAGTTGTTCCTCCTATGGAGCTACAAACCCTTTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTACTGGTTATATAGTTGTTCCTCCTATGGAGCTACAAACCCTTTCA  750

seq1  GCTCCTTGGGTACTTTCTCTAGCTCC-TTCATTAGGGACCCTGTGCTCTG  799
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GCTCCTTGGGTACTTTCTCTAGCTCCTTTCATTAGGGACCCTGTGCTCTG  800

seq1  TCCAATGGTT-GGCTGTGAACATCCACTTCTGTATTATTTGTCAGGCACT  848
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TCCAATGGTTGGGCTGTGAACATCCACTTCTGTATTATTTGTCAGGCACT  850

seq1  -GGCAGAGACTCTCAGAAGACAGC-TATATCAGGTTTCTGTCAGCA  892
       ||||||||||||||||||||||| ||||||| |||||||||||||
seq2  GGGCAGAGACTCTCAGAAGACAGCTTATATCA-GTTTCTGTCAGCA  895


seq1: chr4_70342424_70343503
seq2: B6Ng01-186A01.g_63_1137 (reverse)

seq1  TTCTCTTTAAAGGCCTC-TATCATCTTCATGAGATGGGATTTAAAGTCCA  49
      |||||||  |||||||| ||||||||||||||||| ||| ||||||||||
seq2  TTCTCTT--AAGGCCTCTTATCATCTTCATGAGATTGGAATTAAAGTCCA  48

seq1  TGTGTTGCTATTCAGATGTGTTAGGGTATCCCAAGCTTGCTGTAGTAGGA  99
      ||   ||||| ||||||||||||||||||||||||| |||||||||| ||
seq2  TGGTGTGCTA-TCAGATGTGTTAGGGTATCCCAAGC-TGCTGTAGTA-GA  95

seq1  GAGCTATATTCTGATGGTGCCATATTGTATTGACTTTTGTTGATTATGTT  149
      |||||||| ||||||||||||||| |||| |||||||   |||||||| |
seq2  GAGCTATA-TCTGATGGTGCCATA-TGTAATGACTTT--GTGATTATG-T  140

seq1  TTTGTGCTTGCCTTTTTCCATCTGGTTGTCTTTGGTTGGCTGGCCTGGGT  199
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGC-TGCCTTTTTCCATCTGGTTGTCTTTGGTTGGCTGGCCTGGGT  189

seq1  ATCCTGGGTTGGAGCAGGCCTCCTGGGATGAAAGATGTGCTGAGATTGGG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGGGTTGGAGCAGGCCTCCTGGGATGAAAGATGTGCTGAGATTGGG  239

seq1  GTGGGGCACACCTATCTCTGACTGCAGGTGTAGGTATTGACCAGAAGGAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGCACACCTATCTCTGACTGCAGGTGTAGGTATTGACCAGAAGGAA  289

seq1  AATTAAGCTCTCTTACTCAGAGCTTAGAAATTGTCTTTGTTACAAATAAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAGCTCTCTTACTCAGAGCTTAGAAATTGTCTTTGTTACAAATAAA  339

seq1  ATC-TTTTATGTCATGCATTTATCTCTCTGCCCTGTTTTATTTACCTTAG  398
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTTTATGTCATGCATTTATCTCTCTGCCCTGTTTTATTTACCTTAG  389

seq1  AATCACCTATTTATGTTTGTAGTGAGGAAGTTCAACATTTTCCCAAGTAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACCTATTTATGTTTGTAGTGAGGAAGTTCAACATTTTCCCAAGTAT  439

seq1  TTTACCTAAATAATGTTCTCTTGACTTAAAGCTGAAGACACAGTATGAGA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCTAAATAATGTTCTCTTGACTTAAAGCTGAAGACACAGTATGAGA  489

seq1  TAATGTTCAGATTACATTGTAAAGAGAAATTATATTTATGGATCATCAAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTTCAGATTACATTGTAAAGAGAAATTATATTTATGGATCATCAAA  539

seq1  AGCCTGAATCTGCCTTCTTAAACCTTTCCATATGGTAAGTAGTTTTGAAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGAATCTGCCTTCTTAAACCTTTCCATATGGTAAGTAGTTTTGAAA  589

seq1  ATAATTATTTTTCTTTCTTACTTTCAAATTTTTGGTGTTCTGTACTAATT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTATTTTTCTTTCTTACTTTCAAATTTTTGGTGTTCTGTACTAATT  639

seq1  ATATATCCTAATTATCTTATTTAAGATAATTAAGTGTCTTAATTATGGGT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATCCTAATTATCTTATTTAAGATAATTAAGTGTCTTAATTATGGGT  689

seq1  TAAGATTAGGACCTCTAAAAACCTGCTTTTCAAATGAGCCATTACCCATA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATTAGGACCTCTAAAAACCTGCTTTTCAAATGAGCCATTACCCATA  739

seq1  AAAATTATCTAAAAATTGTTTGTATTTTTATACGTACACAGGTCTTAAAT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTATCTAAAAATTGTTTGTATTTTTATACGTACACAGGTCTTAAAT  789

seq1  CCTCCAAAATGGTAACATTAGCACACAATAAGTTAAAAAATGTAAATGAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCAAAATGGTAACATTAGCACACAATAAGTTAAAAAATGTAAATGAA  839

seq1  GCAGCTACAGACTTTGTTTCCCAGTCACAAGTTACTAAAGACAATTACAT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTACAGACTTTGTTTCCCAGTCACAAGTTACTAAAGACAATTACAT  889

seq1  AAAACAGTCCAATTAGATCAAGGAATGCTCAGTTAGTGGCTTCAGAACTG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAGTCCAATTAGATCAAGGAATGCTCAGTTAGTGGCTTCAGAACTG  939

seq1  CTAGATTTTCTTTTGTTTCATTTATTTTTAAAGAAATGCATATATATATG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGATTTTCTTTTGTTTCATTTATTTTTAAAGAAATGCATATATATATG  989

seq1  CATATATATACATG----TATATATATATATATATATATATATATATATA  1044
      ||||||||||||||    ||||||||||||||||||||||||||||||||
seq2  CATATATATACATGTATATATATATATATATATATATATATATATATATA  1039

seq1  TATATATATCAAAGAACATTTTATTGTAAAGAATTC  1080
      ||||||||||||||||||||||||||||||||||||
seq2  TATATATATCAAAGAACATTTTATTGTAAAGAATTC  1075


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