BAC Information

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BAC

Clone NameB6Ng01-186O08
Chromosome4 (Build37)
Map Location 74,258,811 - 74,259,894
singlet/doubletsinglet
Overlap genenone
Upstream geneOTTMUSG00000000281, OTTMUSG00000000280, OTTMUSG00000000282, OTTMUSG00000000283, Gm428, Rasef, LOC667768, LOC545637, LOC623272, OTTMUSG00000014862, OTTMUSG00000004010, 2310002L09Rik, Frmd3, LOC100039774, Jmjd2c, LOC100040258
Downstream geneLOC100039814, LOC636847, 3110001D03Rik, LOC623529, LOC100039833
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-186O08.bB6Ng01-186O08.g
ACCGA011622GA011623
length1,0711,087
definitionB6Ng01-186O08.b B6Ng01-186O08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaattatggaatcttgaatgtctgagaaatatttaaagaaata
ttcaacatccttagtcatcaaggaaatgcaaatcagaacaaccctgagtt
tccacctcacaccaatcagaatggctaatagtttacctgaagacccatct
atctcactactgagcatatacccaaaagatgctccaccatatcataagaa
cacatgctctactatgttcgtgggagctttattcccaatagccagaaact
agaagttacccggatatccctcaactgaataatggatacagaaattttgg
ttcatttacacagtgttattcaggtattaaagaacaaggacatcatgaat
tttgcaggcaaatggatagaacgagaaaatatcatcctgagtgaggtaac
ccaatcacaaaagaacacgtggtattcattccctgataagtggatattaa
cccaaaagctcagaacacccaagacacaattcagagactacacgaagctc
aagaacatggaagaccaaaatgtggatgcttcagtccttcttagaggggg
aaacaaaatacccatgggaagggttacagagacaaagtgttgaaagaaaa
ctgaaggaaaggtcatccagagactgacccatctggggatccataacaca
tacaaacccagacactattgtggatgccaacaagtgcttgctggcaggag
cctgatatagctgtctgctgagaggctctgccagtgactgaaaaatacag
aggtggatgttctcagccaaccattggaccgagcacaggttccctagtag
aggagctagacaaaggatccaaggagcttaagggggttgaagccccttag
gaggaaaacaatatgaaccaaccagtacccccagagctcccaaggactat
gcaccaattgaagagtacacatgggagggacccatagttccagccatatg
tgtagcagaggatgggcttgttatacatcaatggaggataggcccttggt
cctgagaggctttatgcctcagttgtagggaaattgtcaggacagggaag
caaggaatgggtgggttgctg
gaattcagggcttcaatgtaagggaatagtattagttgtttagaaagtag
gatagggtcattcactctctggcattaaaagtgtcctggcaatatttcct
tcagatctgcttggcatagtttaggtattctgaactctgaggttgccctt
atataactgctgtttcctgcctagtctgctcaggccggagacactgttta
tggtggcaagagaccctgcagtgtcacggcctttgtactatgtacaaatg
caactgaggtcacttgttatgcttggagacagaaatggtctgataaagtg
ccctgggtcatggggtatgcagctgtctgcttagaacttgacagaaagca
gctgagtaaggatgactagctacttaatggatgttaattactgctcatgg
cctccctgtaggtcagaggacagaaggactctgatgtcaggtctgacatg
ctgtggctggcagcaatcttgcacatacttttgattatagttgtggctag
tttagtacagcgaggcagacccaggcggaaatcatgaaacttgcttaact
tgtagatggacaattgataatcagttttacttcagtaatactttcatatt
gaactttagcagatacttctctgagattccctctccttcttcttgattta
aatcagaatgtccgatagttgcaaagcataatttttgagtcatgccttct
ttgatggaattaaaaccactaagtctagacagagtggggttattcaaaat
tttcatttaccaagttcttgcactgaaaatttgtaattgttctgtttaaa
tgagacagaataaacaagaattattacaaattacaatgtaaatggtagta
aaataggttttttattttgattttacaaacttagggaaacagcagaatat
tttaaacaattttagtaaaatttcatatttttcactaagatgtaacttat
gttactgttaaattcaccctaaccagattcaagctgtctcagaagtagct
ctagtaatcaacaacatattagcagaaggtcaatgtgaattatatcacaa
ttgagctttatttgggccataagagaagtgaaaggcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_74258811_74259894
seq2: B6Ng01-186O08.g_69_1155

seq1  GAATTCAGGGCTTCAATGTAAGGGAATAGTATTAGTTGTTTAGAAAGTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGGCTTCAATGTAAGGGAATAGTATTAGTTGTTTAGAAAGTAG  50

seq1  GATAGGGTCATTCACTCTCTGGCATTAAAAGTGTCCTGGCAATATTTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGGGTCATTCACTCTCTGGCATTAAAAGTGTCCTGGCAATATTTCCT  100

seq1  TCAGATCTGCTTGGCATAGTTTAGGTATTCTGAACTCTGAGGTTGCCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATCTGCTTGGCATAGTTTAGGTATTCTGAACTCTGAGGTTGCCCTT  150

seq1  ATATAACTGCTGTTTCCTGCCTAGTCTGCTCAGGCCGGAGACACTGTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAACTGCTGTTTCCTGCCTAGTCTGCTCAGGCCGGAGACACTGTTTA  200

seq1  TGGTGGCAAGAGACCCTGCAGTGTCACGGCCTTTGTACTATGTACAAATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGCAAGAGACCCTGCAGTGTCACGGCCTTTGTACTATGTACAAATG  250

seq1  CAACTGAGGTCACTTGTTATGCTTGGAGACAGAAATGGTCTGATAAAGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGAGGTCACTTGTTATGCTTGGAGACAGAAATGGTCTGATAAAGTG  300

seq1  CCCTGGGTCATGGGGTATGCAGCTGTCTGCTTAGAACTTGACAGAAAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGGTCATGGGGTATGCAGCTGTCTGCTTAGAACTTGACAGAAAGCA  350

seq1  GCTGAGTAAGGATGACTAGCTACTTAATGGATGTTAATTACTGCTCATGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGTAAGGATGACTAGCTACTTAATGGATGTTAATTACTGCTCATGG  400

seq1  CCTCCCTGTAGGTCAGAGGACAGAAGGACTCTGATGTCAGGTCTGACATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCTGTAGGTCAGAGGACAGAAGGACTCTGATGTCAGGTCTGACATG  450

seq1  CTGTGGCTGGCAGCAATCTTGCACATACTTTTGATTATAGTTGTGGCTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGCTGGCAGCAATCTTGCACATACTTTTGATTATAGTTGTGGCTAG  500

seq1  TTTAGTACAGCGAGGCAGACCCAGGCGGAAATCATGAAACTTGCTTAACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTACAGCGAGGCAGACCCAGGCGGAAATCATGAAACTTGCTTAACT  550

seq1  TGTAGATGGACAATTGATAATCAGTTTTACTTCAGTAATACTTTCATATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGATGGACAATTGATAATCAGTTTTACTTCAGTAATACTTTCATATT  600

seq1  GAACTTTAGCAGATACTTCTCTGAGATTCCCTCTCCTTCTTCTTGATTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTTAGCAGATACTTCTCTGAGATTCCCTCTCCTTCTTCTTGATTTA  650

seq1  AATCAGAATGTCCGATAGTTGCAAAGCATAATTTTTGAGTCATGCCTTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGAATGTCCGATAGTTGCAAAGCATAATTTTTGAGTCATGCCTTCT  700

seq1  TTGATGGAATTAAAACCACTAAGTCTAGACAGAGTGGGGTTATTCAAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGGAATTAAAACCACTAAGTCTAGACAGAGTGGGGTTATTCAAAAT  750

seq1  TTTCATTTACCAAGTTCTTGCACTGAAAATTTGTAATTGTTCTGTTTAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATTTACCAAGTTCTTGCACTGAAAATTTGTAATTGTTCTGTTTAAA  800

seq1  TGAGACAGAATAAAACAAGAATTATTACAAATTACAATGTAAATGGTAGT  850
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TGAGACAGAAT-AAACAAGAATTATTACAAATTACAATGTAAATGGTAGT  849

seq1  AAAATAGG-TTTTTATTTTGATTTTACAAACTTAGGGAAACAGCAGAATA  899
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAGGTTTTTTATTTTGATTTTACAAACTTAGGGAAACAGCAGAATA  899

seq1  TTTTAAAACAATTTTAGTAAAATTTCATA-TTTTCACTAAGATGTAACTT  948
      |||| |||||||||||||||||||||||| ||||||||||||||||||||
seq2  TTTT-AAACAATTTTAGTAAAATTTCATATTTTTCACTAAGATGTAACTT  948

seq1  ATG-TACTGTTAAATTCACCCTAA-CAGATTCAAGCTGTCTCAGAAGTAG  996
      ||| |||||||||||||||||||| |||||||||||||||||||||||||
seq2  ATGTTACTGTTAAATTCACCCTAACCAGATTCAAGCTGTCTCAGAAGTAG  998

seq1  C-CTAGGTATCCAACAACATATAGCCAGAAGGTCAATGTGGAATATATCC  1045
      | ||| |||  |||||||||||   ||||||||||||||| | ||||| |
seq2  CTCTA-GTAATCAACAACATATTAGCAGAAGGTCAATGTGAATTATAT-C  1046

seq1  ACAATGGAG-TTTATTT-GGCCATAA-AGAAGAGTGAAGGCC  1084
      ||||| ||| ||||||| |||||||| ||||| |  ||||||
seq2  ACAATTGAGCTTTATTTGGGCCATAAGAGAAGTG-AAAGGCC  1087