BAC Information

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BAC

Clone NameB6Ng01-187G23
Chromosome4 (Build37)
Map Location 6,124,420 - 6,125,565
singlet/doubletsinglet
Overlap gene3110003A22Rik
Upstream gene1700012H17Rik, LOC669309
Downstream geneCyp7a1, Sdcbp, Nsmaf, LOC100039397, LOC100039414, Tox, LOC100039421, LOC666700
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-187G23.bB6Ng01-187G23.g
ACCGA012017GA012018
length1,156367
definitionB6Ng01-187G23.b B6Ng01-187G23.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaggtcacagaattaacacgtgaagagcaaggaaaatatttata
catcttataagaattcaaatattagatttattttatttagagcaatatta
agttattctgcatgtgctcaaaccagggagccaaaagttaactaccacaa
taccaaggtatagtaacatattaaatactacaaaactttggggaatatat
acagtaggcgtcagttaacatattacacatatctacatatactcatttat
ctaacaagaaagaattacatcaaaggatagtatattcaaaccatgccgag
ataccaacctgctgattacaaagacaaactgtacctgacaatggagtgat
gtggtggtcagcaccttaatcaagtgagcatatcaccaatagtggaaaaa
cttgaaattatatggctcctgatgtgatataataaaaagcagacagtatc
acttatctaatactcttgacaaaaatgtttaacaagaatctaattatgag
gaaacagtgatctagaatgtgggacgttttgagacatctggagcatacat
tttaaaattgagtgtattacattttagattatgtaggtgagctaaaaaca
gacaaaaaagagaggatgccctgcattaaaactcaacacaggaaaaatca
gatgcaatgagtagtctctaactgggtcccaaaatccccaaagctggaag
aaatggctgcctccaggctctacgttaaacttccaggctctaagttaaag
gacgtcgttaacctatacttttagattttaggttatatactttattctta
gggatgcacgatgaaatatctagagttgagcatcacagtggctataatgt
gctttccgacagttgacaagagagtgagcatgtgagagcgcatgctccac
tctaacacgtgacaaactcggaagcagaggaaatggttagtgtttccgtc
atcttactcgtctttacattttctatgggctttaaaaaaaattttttttt
ttttttagtacagaaaaatgcatccatttttgtcctccccctacaaaaat
aatggtgaagtggccaaacctaatgttcaacggacctttttcctacttct
gtttaaccaagtatttttttcacgattggagagataatcagaaaattcaa
ggttgc

atggctgtcggccctgttgctcatgcttaaatgatgctcatttaatactc
ttggcatttgtttgtttctacaaggaatgtcaaaaggatgcaaagaggca
cattgcgtgctgagaaacactaaataacactcatgtattatgactgagag
gtcccttcaaacagtgaaaccatcaacaacaaattttaaaaatatacaaa
tgcctcactaaagctcttcaaagtacatctgcttgcaatataagaattga
aacaagaaatcagaatatcacttgccccagggagtttataggtcaggtag
aaggggcggaacatccacttggagacggggtggggagaagatatgggatg
tggaacagtcggaggta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_6124420_6125565
seq2: B6Ng01-187G23.b_52_1207 (reverse)

seq1  GCAAACTTGAATTTTCTGATTATCTCTC--ATTCTG-AAAAAATACTTTG  47
      |||| |||||||||||||||||||||||  ||  || ||||||||||| |
seq2  GCAACCTTGAATTTTCTGATTATCTCTCCAATCGTGAAAAAAATACTTGG  50

seq1  TT-AACAGAAGTAG---AAAAGTTCGTTGAACATTAGGTTTTTGCCACTT  93
      || |||||||||||   ||| || |||||||||||||| ||| |||||||
seq2  TTAAACAGAAGTAGGAAAAAGGTCCGTTGAACATTAGG-TTTGGCCACTT  99

seq1  CA-CATTATTTTTTGTAGGGG--AGACAAAAAT-GATGCATTTTTCTGTA  139
      || ||||| ||||||||||||   ||||||||| ||||||||||||||||
seq2  CACCATTA-TTTTTGTAGGGGGAGGACAAAAATGGATGCATTTTTCTGTA  148

seq1  CTAAAAAAAAAAAAAATTTTTTTTTAAAGCCCATAGAAAATGTAAAGACG  189
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CTAAAAAAAAAAAAAAATTTTTTTTAAAGCCCATAGAAAATGTAAAGACG  198

seq1  AGTAAGATGAC-GAAACACTAACCATTTCCTCTGCTTCCGAGTTTGTCAC  238
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGATGACGGAAACACTAACCATTTCCTCTGCTTCCGAGTTTGTCAC  248

seq1  GTGTTAGAGTGGAGCATGCGCTCTCACATGCTCACTCTCTTGTCAACTGT  288
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTAGAGTGGAGCATGCGCTCTCACATGCTCACTCTCTTGTCAACTGT  298

seq1  CGGAAAGCACATTATAGCCACTGTGATGCTCAACTCTAGATATTTCATCG  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAAAGCACATTATAGCCACTGTGATGCTCAACTCTAGATATTTCATCG  348

seq1  TGCATCCCTAAGAATAAAGTATATAACCTAAAATCTAAAAGTATAGGTTA  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCCCTAAGAATAAAGTATATAACCTAAAATCTAAAAGTATAGGTTA  398

seq1  ACGACGTCCTTTAACTTAGAGCCTGGAAGTTTAACGTAGAGCCTGGAGGC  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGACGTCCTTTAACTTAGAGCCTGGAAGTTTAACGTAGAGCCTGGAGGC  448

seq1  AGCCATTTCTTCCAGCTTTGGGGATTTTGGGACCCAGTTAGAGACTACTC  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATTTCTTCCAGCTTTGGGGATTTTGGGACCCAGTTAGAGACTACTC  498

seq1  ATTGCATCTGATTTTTCCTGTGTTGAGTTTTAATGCAGGGCATCCTCTCT  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCATCTGATTTTTCCTGTGTTGAGTTTTAATGCAGGGCATCCTCTCT  548

seq1  TTTTTGTCTGTTTTTAGCTCACCTACATAATCTAAAATGTAATACACTCA  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTCTGTTTTTAGCTCACCTACATAATCTAAAATGTAATACACTCA  598

seq1  ATTTTAAAATGTATGCTCCAGATGTCTCAAAACGTCCCACATTCTAGATC  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAAATGTATGCTCCAGATGTCTCAAAACGTCCCACATTCTAGATC  648

seq1  ACTGTTTCCTCATAATTAGATTCTTGTTAAACATTTTTGTCAAGAGTATT  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTTCCTCATAATTAGATTCTTGTTAAACATTTTTGTCAAGAGTATT  698

seq1  AGATAAGTGATACTGTCTGCTTTTTATTATATCACATCAGGAGCCATATA  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAGTGATACTGTCTGCTTTTTATTATATCACATCAGGAGCCATATA  748

seq1  ATTTCAAGTTTTTCCACTATTGGTGATATGCTCACTTGATTAAGGTGCTG  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAAGTTTTTCCACTATTGGTGATATGCTCACTTGATTAAGGTGCTG  798

seq1  ACCACCACATCACTCCATTGTCAGGTACAGTTTGTCTTTGTAATCAGCAG  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCACATCACTCCATTGTCAGGTACAGTTTGTCTTTGTAATCAGCAG  848

seq1  GTTGGTATCTCGGCATGGTTTGAATATACTATCCTTTGATGTAATTCTTT  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGTATCTCGGCATGGTTTGAATATACTATCCTTTGATGTAATTCTTT  898

seq1  CTTGTTAGATAAATGAGTATATGTAGATATGTGTAATATGTTAACTGACG  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTAGATAAATGAGTATATGTAGATATGTGTAATATGTTAACTGACG  948

seq1  CCTACTGTATATATTCCCCAAAGTTTTGTAGTATTTAATATGTTACTATA  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACTGTATATATTCCCCAAAGTTTTGTAGTATTTAATATGTTACTATA  998

seq1  CCTTGGTATTGTGGTAGTTAACTTTTGGCTCCCTGGTTTGAGCACATGCA  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGTATTGTGGTAGTTAACTTTTGGCTCCCTGGTTTGAGCACATGCA  1048

seq1  GAATAACTTAATATTGCTCTAAATAAAATAAATCTAATATTTGAATTCTT  1088
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAACTTAATATTGCTCTAAATAAAATAAATCTAATATTTGAATTCTT  1098

seq1  ATAAGATGTATAAATATTTTCCTTGCTCTTCACGTGTTAATTCTGTGACC  1138
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGATGTATAAATATTTTCCTTGCTCTTCACGTGTTAATTCTGTGACC  1148

seq1  TGGAATTC  1146
      ||||||||
seq2  TGGAATTC  1156


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