BAC Information

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BAC

Clone NameB6Ng01-187P07
Chromosome4 (Build37)14 (Build37)
Map Location 22,850,166 - 22,851,000102,451,761 - 102,452,776
singlet/doubletsingletsinglet
Overlap gene1700025O08Rik
Upstream gene6230409E13Rik, LOC100040379, Fbxl4, Pou3f2, LOC664911
Downstream geneLOC625462, LOC383998, LOC100040464, LOC623873
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-187P07.bB6Ng01-187P07.g
ACCGA012391GA012392
length1,1391,018
definitionB6Ng01-187P07.b B6Ng01-187P07.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(22,850,166 - 22,851,000)(102,451,761 - 102,452,776)
sequence
gaattcctagatctgatccttgcaggttctctgattgtcatctcagtctc
tatgaggccctgtgagccctggttgattgattctctaagccatgatcttg
taatgtttttgacccttgtggttcctacagttcttcctctccctcttctt
tgggattcccaagctctgcctgatgtttagctatgggtctctgagttcac
ttccatcatttgctggatgaaggttttatgaggataactatgataggctc
ttgtctatcagtgtagcagaatctcatcaggaatcatttcattgactttg
tttgtctctttgtttgctttgattgttgtgtttgaatcaatcctaagact
ctgggctagccagcctctgttttatgtccatccaggaagctgaaggttaa
acccattcactgctcagtttcatggcatgggtctcaagttgaaccagtct
tttgttggccagccccacaagttctgtgacacctttacaccagaacatcc
ctgcaggcaggacaaattgaaggttgaaggtgtttagctgagctggtgtc
ccaggctctccactggaaggcttgctattacactagttctctggttcagg
ctccatatccctgatttctgggagtcttcactagagacatcctcacagat
tccaagaggttcccattgcattaggtttctacatgaccctgatgtccctc
aattccagttgtctctcctagtacccttcctccatcgctaccctctcctc
aacctcatccttttgttcttatccccacctacccaaagtctatttccact
tctcagggagatccttgagacagtcacctccctttttaaaagaactcttt
atgtgtgtatgctcattagtatataccaggaaagcatgaagtgctaagga
ttgtttcaaatccttgggtacatcaataaaaattcagatccaatccaaat
caaaggatattttcctagagaaaagaaaggtagaggcagggctataaaca
gtaaatattcatgttagtacttcaaaatgaaaaatttggggaaaatagaa
agagtgaaaagcatgatttgagtatgaactgcatttaagtgagagtaatt
ttccattgacagctattgacttagacttaaattagtaag
gaattctttgttcagttctgagccccattttttaatggggttatttgagt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ctttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcactggacatagtacta
ccggaggatccagcaatacctctcctgggcatatatccagaagatgcccc
aacaggtaagaaggacacatgctccactatgttcatagcagccttattta
taatagccagaagctggaaagaacctagatgcccctcaacagaggaatgg
atacagaaaatgtggtacatctacacaatggagtactactcagctattaa
aaagaatgaatttatgaaattcctaggcaaatggatggacctggagggca
tcatcctgagggaggtaacacattcacaaagaaactcacacaatttgtat
tcactgataagtggatattagccccaaacctaggatacccaagatataag
atataatttgctaaacacatgaaactcaagaagaatgaagactgaagtgt
ggacactatgcctctccttagatttgggaacaaaacacccatggaaggag
ttacagagacaaagtttggagctgagatgaaaggatggaccatgtagaga
ctgccatatccagggatccaccccataatcagcatccaaacgctgacacc
attgcatacactagcaagattttattgaaagggcccagatgtagctgtct
cttgtgagactatgccggggcctagcaacacagaagtggatgctcacagt
cagctaatgggatggatcatagggctcccaatgggaggagctaggagaag
tagccaaggagctaaagggatctgcaacctataggtggacacattatgga
ctaaccagtacccggagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_22850166_22851000
seq2: B6Ng01-187P07.b_366_1187

seq1  TTTGATTGTTGTGTTTGAATCAATCCTAAGACTCTGGGCTAGCCAGCCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATTGTTGTGTTTGAATCAATCCTAAGACTCTGGGCTAGCCAGCCTC  50

seq1  TGTTTTATGTCCATCCAGGAAGCTGAAGGTTAAACCCATTCACTGCTCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTATGTCCATCCAGGAAGCTGAAGGTTAAACCCATTCACTGCTCAG  100

seq1  TTTCATGGCATGGGTCTCAAGTTGAACCAGTCTTTTGTTGGCCAGCCCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATGGCATGGGTCTCAAGTTGAACCAGTCTTTTGTTGGCCAGCCCCA  150

seq1  CAAGTTCTGTGACACCTTTACACCAGAACATCCCTGCAGGCAGGACAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTCTGTGACACCTTTACACCAGAACATCCCTGCAGGCAGGACAAAT  200

seq1  TGAAGGTTGAAGGTGTTTAGCTGAGCTGGTGTCCCAGGCTCTCCACTGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGTTGAAGGTGTTTAGCTGAGCTGGTGTCCCAGGCTCTCCACTGGA  250

seq1  AGGCTTGCTATTACACTAGTTCTCTGGTTCAGGCTCCATATCCCTGATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTGCTATTACACTAGTTCTCTGGTTCAGGCTCCATATCCCTGATTT  300

seq1  CTGGGAGTCTTCACTAGAGACATCCTCACAGATTCCAAGAGGTTCCCATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAGTCTTCACTAGAGACATCCTCACAGATTCCAAGAGGTTCCCATT  350

seq1  GCATTAGGTTTCTACATGACCCTGATGTCCCTCAATTCCAGTTGTCTCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTAGGTTTCTACATGACCCTGATGTCCCTCAATTCCAGTTGTCTCTC  400

seq1  CTAGTACCCTTCCTCCATCGCTACCCTCTCCTCAACCTCATCCTTTTGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTACCCTTCCTCCATCGCTACCCTCTCCTCAACCTCATCCTTTTGTT  450

seq1  CTTATCCCCACCTACCCAAAGTCTATTTCCACTTCTCAGGGAGATCCTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATCCCCACCTACCCAAAGTCTATTTCCACTTCTCAGGGAGATCCTTG  500

seq1  AGACAGTCACCTCCCTTTTTAAAAGAACTCTTTATGTGTGTATGCTCATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGTCACCTCCCTTTTTAAAAGAACTCTTTATGTGTGTATGCTCATT  550

seq1  AGTATATACCAGGAAAGCATGAAGTGCTAAGGATTGTTTCAAATCCTTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATATACCAGGAAAGCATGAAGTGCTAAGGATTGTTTCAAATCCTTGG  600

seq1  GTTACATCAATAAAAATTCAGATCCAAATCCAAATCAAAGGATATTTTCC  650
      | ||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  G-TACATCAATAAAAATTCAGATCC-AATCCAAATCAAAGGATATTTTCC  648

seq1  TAGAGAAAAGAAAGGTAGAGGCAAGGGCTATAAACAGTAAATAATCATGT  700
      |||||||||||||||||||||| |||||||||||||||||||| ||||||
seq2  TAGAGAAAAGAAAGGTAGAGGC-AGGGCTATAAACAGTAAATATTCATGT  697

seq1  TAGTACTTTTAAAAATGAAAAATTTGGGGGAAAATAGAAAGAAGTGAAAA  750
      ||||||  || |||||||||||||| ||||||||||||||| |||| |||
seq2  TAGTAC--TTCAAAATGAAAAATTT-GGGGAAAATAGAAAG-AGTG-AAA  742

seq1  AGCATGA-TTGAGTATGAACTGCAATTTAAGTGAGAGTAAATTTTCATTG  799
      ||||||| ||||||||||||||| |||||||||||||||| ||| |||||
seq2  AGCATGATTTGAGTATGAACTGC-ATTTAAGTGAGAGTAATTTTCCATTG  791

seq1  AAAAGCTATTTGAACTAAGACTTTAAATTAGGTAAG  835
       | |||||||   ||| |||| |||||||| |||||
seq2  -ACAGCTATT--GACTTAGAC-TTAAATTA-GTAAG  822

seq1: chr14_102451761_102452776
seq2: B6Ng01-187P07.g_118_815

seq1  GAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGCCCCCTAT  50
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCCCTAT  50

seq1  CTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCTCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCTCTTT  100

seq1  GTCTTATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCATTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCATTAG  150

seq1  GTCCCATTTGTCAATTCTCGATCTTACAGCACAAGCCATTGCTGTTCTGT  200
      ||||||||||||||||||||||||||||||||                  
seq2  GTCCCATTTGTCAATTCTCGATCTTACAGCAC------------------  182

seq1  TCAGGAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTTTCCCCACTTTC  250
                                                        
seq2  --------------------------------------------------  182

seq1  TCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCTTTGATCCA  300
                                                        
seq2  --------------------------------------------------  182

seq1  TTTAGATTTGACCTTAGTACAAGGAGATAAGTATGGATCGATTTGCATTC  350
                                                        
seq2  --------------------------------------------------  182

seq1  TTCTACATGATAACAACCAGTTGTGCCAGCACCATTTGTTGAAAATGCTG  400
                                                        
seq2  --------------------------------------------------  182

seq1  TCTTTCTTCCACTGGATGGTTTTAGCTCCCTTGTCGAAGATCAAGTGACC  450
                                                        
seq2  --------------------------------------------------  182

seq1  ATAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTATTCCATTGGGAAT  500
                                                        
seq2  --------------------------------------------------  182

seq1  TGGACATAGTACTACCGGAGGATCCAGCAATACCTCTCCTGGGCATATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACATAGTACTACCGGAGGATCCAGCAATACCTCTCCTGGGCATATAT  232

seq1  CCAGAAGATGCCCCAACTGGTAAGAAGGACACATGCTCCACTATGTTCAT  600
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CCAGAAGATGCCCCAACAGGTAAGAAGGACACATGCTCCACTATGTTCAT  282

seq1  AGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGATGCCCCT  650
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  AGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCTAGATGCCCCT  332

seq1  CAACAGAGGAATGGATACAGAAAATGTGGTACATCTACACAATGGAGTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGAGGAATGGATACAGAAAATGTGGTACATCTACACAATGGAGTAC  382

seq1  TACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGCCAAATGGAT  750
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGGCAAATGGAT  432

seq1  GGACCTGGAGGGCATCATCCTGAGTGAGGTAACACATTCACAAAGGAACT  800
      |||||||||||||||||||||||| |||||||||||||||||||| ||||
seq2  GGACCTGGAGGGCATCATCCTGAGGGAGGTAACACATTCACAAAGAAACT  482

seq1  CACACAATATGTACTCACTGATAAGTGGATATTAGCCCAAAACCTAGGAT  850
      |||||||| |||| |||||||||||||||||||||||| |||||||||||
seq2  CACACAATTTGTATTCACTGATAAGTGGATATTAGCCCCAAACCTAGGAT  532

seq1  ACCCAAGATATAAGTTACAATTTCCTAAAGACATGAAACTCAAGAAAAAT  900
      |||||||||||||| || ||||| ||||| |||||||||||||||| |||
seq2  ACCCAAGATATAAGATATAATTTGCTAAACACATGAAACTCAAGAAGAAT  582

seq1  GAAGACTGAAGTGTGGACACTATGCCCCTCCTTAGAAGTGGGAACAAATC  950
      |||||||||||||||||||||||||| |||||||||  |||||||||| |
seq2  GAAGACTGAAGTGTGGACACTATGCCTCTCCTTAGATTTGGGAACAAAAC  632

seq1  ACCCTTGGAAGGAGTTACAGAGACAAAGTTTGGAGCTGAGATTAAAGGGT  1000
      |||| ||||||||||||||||||||||||||||||||||||| ||||| |
seq2  ACCCATGGAAGGAGTTACAGAGACAAAGTTTGGAGCTGAGATGAAAGGAT  682

seq1  GGACCATGTAGAGACT  1016
      ||||||||||||||||
seq2  GGACCATGTAGAGACT  698