BAC Information

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BAC

Clone NameB6Ng01-187P15
Chromosome4 (Build37)
Map Location 103,629,393 - 103,630,551
singlet/doubletsinglet
Overlap genenone
Upstream geneSgip1, Tctex1d1, Insl5, Wdr78, Mier1, Slc35d1, 4921539E11Rik, 4930456L15Rik, Oma1, LOC665451, LOC100039940, EG665460, LOC622315
Downstream geneDab1, C8b, C8a, 1700024P16Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-187P15.bB6Ng01-187P15.g
ACCGA012407GA012408
length1,1801,001
definitionB6Ng01-187P15.b B6Ng01-187P15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttggatgggcaagttgttttcccagcttagattctgtacactg
taattagcatctgtgaagaaagagcagtgaattctatccattcctctgta
ctgcatcctgctctggaggactggcccagacactgggcttttcctatgtg
tacctgatctatgctgttgaaatgagtttgttgtaggctaaagctcttac
acgtactaagagacagaggcaaagggcatggtctttttcagatgttggat
taggtcttaagtgctgcaagttggcattcaaagctcttaagggtgccatt
cattctctcaacccatgtcagcttacttgatatgctaagcactccactag
acacaggtctacagagcacccacaagtctctcaaaagttgaactggccag
aaaagatcaggaaactgaaaatatcagctgagaatcttgggtttggggac
ctgtgagtgaatcaaatgcttgtttgtattaattagaatgagtcacgtta
gcgtccttatcaacagcccttcccactcttagacttagcacaactgcagg
gtattattctgctcattgcatccatttgaggaactgggttactttctagt
cttacattaccattcccttctcatgttgccaaaatgtttaaagaagagga
cagaaagaggaaaatcccacttgatgggtttggaggtaatctaactgaac
atggcctacgtctcttctaactgtagtcacttggctggagatcagccata
gaacccaccgaattgtgaaggaacagcaaatataggttagctagagcaga
agagacacagatgtatttttgtctcaatatgttcccttaatcagttttta
ttcaaactttagacaaactttcccagccatgtcaaaaggccccatcacaa
aacatttatatttctgggggtggaaagaaagctctgctgacaattcacct
tgtacacagttgtccttaaagatggtaacctaaccttttcaccccaggga
ttcctcatcttccttattctattcacaaaaatagaaataggcagagaatt
gtgaccaaacaatttcatttcccatgaagtttttcttgaaaaatttgaaa
atgagcaaggaaaacaaacgtttcacaagtgtgagaaaaagagtttttta
ctgttttgttccttttaagcaggttagaaa
gaattctggggaactcaattgctctttcctggatcaggtactatgcttcc
aatcttctttctgtcagtgctggggatcaaatccaaggccaagtgcatgc
taggtactttactatggagccaaatccccagtccccgtgtgctagctgtg
agcctgcagcttgctgttgttgtgttgtgttcatttgtgtttttaatttt
atgttttacttattcactttacatcctgcccactgtccccctctggtcac
cttctcccacaatctttcttctatgctcaacttcccttctcctctgaggt
agtgagggacccccatgggtaccccccaccctggcacttcaagtctctga
gaggctaggtacctcctctcccactgaggccagacaaagcagctcagtta
gaagaacatatctcccgtacaggcaacagcttttcagaaagcccctattc
cagttgtttgggattcacatgaagaccaagctgcacatctactacatatt
tgtagggaggcctaggtccagcctgtatataactctgagagccccaaggg
tccaggttagttgactttgttcataagaggcagatagaggaatggaactg
ggagggagagaagctggggaggggaataggagggttcaggaccaggtatg
gggaaggacatgagagatggctggatgtccataaacaatgaatgaaaatc
tataactgatgggtgtgtggagatgagggccatctccaggatgagacaga
gacctgggaggtgtccaagaattcaacaggggctgaccttagctcacaac
actgggggatacagaacctgaagaaggccacctctagtagctaggcagga
agtcctttgggatcaatcgagacaccaaaccactcacgaaacttccaact
caaaattaattcctgtcctccaaggaatggaagtagaactaagcattgcc
caaccaataacagggcccaacttgaaggcaatcaccagtcccctggcact
a
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_103629393_103630551
seq2: B6Ng01-187P15.b_46_1225

seq1  GAATTCTTTGGATGGGCAAGTTGTTTTCCCAGCTTAGATTCTGTACACTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGGATGGGCAAGTTGTTTTCCCAGCTTAGATTCTGTACACTG  50

seq1  TAATTAGCATCTGTGAAGAAAGAGCAGTGAATTCTATCCATTCCTCTGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAGCATCTGTGAAGAAAGAGCAGTGAATTCTATCCATTCCTCTGTA  100

seq1  CTGCATCCTGCTCTGGAGGACTGGCCCAGACACTGGGCTTTTCCTATGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATCCTGCTCTGGAGGACTGGCCCAGACACTGGGCTTTTCCTATGTG  150

seq1  TACCTGATCTATGCTGTTGAAATGAGTTTGTTGTAGGCTAAAGCTCTTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTGATCTATGCTGTTGAAATGAGTTTGTTGTAGGCTAAAGCTCTTAC  200

seq1  ACGTACTAAGAGACAGAGGCAAAGGGCATGGTCTTTTTCAGATGTTGGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTACTAAGAGACAGAGGCAAAGGGCATGGTCTTTTTCAGATGTTGGAT  250

seq1  TAGGTCTTAAGTGCTGCAAGTTGGCATTCAAAGCTCTTAAGGGTGCCATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTCTTAAGTGCTGCAAGTTGGCATTCAAAGCTCTTAAGGGTGCCATT  300

seq1  CATTCTCTCAACCCATGTCAGCTTACTTGATATGCTAAGCACTCCACTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTCTCAACCCATGTCAGCTTACTTGATATGCTAAGCACTCCACTAG  350

seq1  ACACAGGTCTACAGAGCACCCACAAGTCTCTCAAAAGTTGAACTGGCCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGGTCTACAGAGCACCCACAAGTCTCTCAAAAGTTGAACTGGCCAG  400

seq1  AAAAGATCAGGAAACTGAAAATATCAGCTGAGAATCTTGGGTTTGGGGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGATCAGGAAACTGAAAATATCAGCTGAGAATCTTGGGTTTGGGGAC  450

seq1  CTGTGAGTGAATCAAATGCTTGTTTGTATTAATTAGAATGAGTCACGTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAGTGAATCAAATGCTTGTTTGTATTAATTAGAATGAGTCACGTTA  500

seq1  GCGTCCTTATCAACAGCCCTTCCCACTCTTAGACTTAGCACAACTGCAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTCCTTATCAACAGCCCTTCCCACTCTTAGACTTAGCACAACTGCAGG  550

seq1  GTATTATTCTGCTCATTGCATCCATTTGAGGAACTGGGTTACTTTCTAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTATTCTGCTCATTGCATCCATTTGAGGAACTGGGTTACTTTCTAGT  600

seq1  CTTACATTACCATTCCCTTCTCATGTTGCCAAAATGTTTAAAGAAGAGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACATTACCATTCCCTTCTCATGTTGCCAAAATGTTTAAAGAAGAGGA  650

seq1  CAGAAAGAGGAAAATCCCACTTGATGGGTTTGGAGGTAATCTAACTGAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAGAGGAAAATCCCACTTGATGGGTTTGGAGGTAATCTAACTGAAC  700

seq1  ATGGCCTACGTCTCTTCTAACTGTAGTCACTTGGCTGGAGATCAGCCATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCCTACGTCTCTTCTAACTGTAGTCACTTGGCTGGAGATCAGCCATA  750

seq1  GAACCCACCGAATTGTGAAGGAACAGCAAATATAGGTTAGCTAGAGCAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCCACCGAATTGTGAAGGAACAGCAAATATAGGTTAGCTAGAGCAGA  800

seq1  AGAGACACAGATGTATTTTTGTCTCAATATGTTCCCTTAATCAGTTTTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACACAGATGTATTTTTGTCTCAATATGTTCCCTTAATCAGTTTTTA  850

seq1  TTCAAAC-TTAGACAAACTTTCCCAGCCATGTCAAAAGGCCCCATCACAA  899
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAACTTTAGACAAACTTTCCCAGCCATGTCAAAAGGCCCCATCACAA  900

seq1  AACA-TTATA-TTCT-GGGGTGGAAAGAAAGCTCTGCTGACAATTCACC-  945
      |||| ||||| |||| ||||||||||||||||||||||||||||||||| 
seq2  AACATTTATATTTCTGGGGGTGGAAAGAAAGCTCTGCTGACAATTCACCT  950

seq1  TGTACACAGTTGTCC-TAAAGATGGTAACCTAA-CTTTTCACCCCA-GGA  992
      ||||||||||||||| ||||||||||||||||| |||||||||||| |||
seq2  TGTACACAGTTGTCCTTAAAGATGGTAACCTAACCTTTTCACCCCAGGGA  1000

seq1  TTCCTCATCT--CCTATTCTA-TCACAAAAATAGAAATA-GCAGAGAATT  1038
      ||||||||||  | ||||||| ||||||||||||||||| ||||||||||
seq2  TTCCTCATCTTCCTTATTCTATTCACAAAAATAGAAATAGGCAGAGAATT  1050

seq1  GTGACCAAACAAATTCA-TTCCCATGAAGTTTT--CTGAAAAA-TTGAAA  1084
      |||||||||||| |||| |||||||||||||||   ||||||| ||||||
seq2  GTGACCAAACAATTTCATTTCCCATGAAGTTTTTCTTGAAAAATTTGAAA  1100

seq1  ATGAGCAAG--AAACAAACG-TTCACAA--GTGAGAAAAAGAG-TTTTTA  1128
      |||||||||  ||||||||| |||||||  ||||||||||||| ||||||
seq2  ATGAGCAAGGAAAACAAACGTTTCACAAGTGTGAGAAAAAGAGTTTTTTA  1150

seq1  GTGTTTTGTTCCCTTTTAAGCAAGGTAGAAA  1159
       ||||||||| ||||||||||| | ||||||
seq2  CTGTTTTGTT-CCTTTTAAGCAGGTTAGAAA  1180