BAC Information

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BAC

Clone NameB6Ng01-188C21
Chromosome4 (Build37)
Map Location 54,692,222 - 54,693,359
singlet/doubletsinglet
Overlap genenone
Upstream geneFcmd, Tal2, LOC435784, Tmem38b, LOC670124, LOC100041280, LOC666901, LOC100041303
Downstream geneLOC384018, EG666920, Zfp462, LOC670211, Rad23b, LOC666953, LOC100041348, Klf4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-188C21.bB6Ng01-188C21.g
ACCGA012554GA012555
length1,141974
definitionB6Ng01-188C21.b B6Ng01-188C21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctccactaaacccttatggtcctgagctttgttgttgttgttgtt
gttgttgttgttgttgttgttgtgagactattaatgactgcttctatatc
tttaggggttatgggactgattttaaggatcttaaagaaaaaccaatcat
aatttcacaggatggtactctgagctggagaagggagaagggaagacgaa
gtaattctcaaacaggcaggttcagtggaaacctgtggaagaatctcaga
gtaaaacagtaaagcaagacaaacaacagagaatgaaccaaaggaagcac
aagaagtcatcgcagagacagtctgtttatacgtgttcaaagtgctggag
agaaccaagaaggttagaagtggttagtaagtacgattggagggagttgc
agcctagccatggttgccacgacagttcacatcatgtatctgcttttaca
tcctttctctgtgttacttttttatatctgtagcaaaacatcatagtcaa
aggaacttattgaaggaagaattcacctggggattaagattcagagggtt
agggtctataatgacaaggactgcactgcaacaagcagcttacatggcag
ctagggttgaaatctgagagctgagggctcatatctcaaccacaaaaaaa
gaagcagagagaacagactggtttgtacatggctttgaaaccttcagtgt
cacctccagtgacatatttcccccagcaaggccataccttgaaatcctgt
ccaaacagtgctatcaactgaggacgaagtcttttgactaccagagctca
tggggacatcatttcttatcatacctctctcacatatgtgtctgtcactt
cactatatgtttagggttcctccactatcttttaaatctcttcacccaag
attaggaactgcttgagctccaaaccgtatgtgcttacatccaaaacctg
ctcatttatctataacatttaagcaattagcaaatcgttttggcaacttc
ccttcctggccctccattctcttccttctctgtaaattttcctccctctg
aggtcaggattatgatatgtcttataattttgccttcatgttgtatatgg
agtttccaaactggtccaataattaacgttatttttaaaat

gaattctccacttttccaacatcatgtctgcctggatgttgccctgcttt
ccatcatgatgataatggactgaacctttgaaaccataagccaaggtaat
ttaagagttaccttgttcacgatgtctcttcacagcagtaaaaccctaac
aaatgcagaaattggtaccaggaactagagtattgctgtgataggtcagg
ccatggttttttgtttgtttgtttttggtttttttttgttttttgttttt
tgttttttgtttttgtttttttgaggacaatggatttttgaactttgaat
gtggaaaataatggaatattttaatggggcttagtggcccatcctagtag
gaatatggaagatattggtacttagggtaatttgaactgtggagtcctgg
ctcaagaggtttatgaggaaaggaattttagtacattgcctggaggtcat
tctcacaatgttttgtaaagaatatggctgatttttgcccttctctgggg
agtctacctgatgctaagctggatagattcagtttggctgcattgaggaa
ggaagtcttaaaaaagcagagaatagactttgtcatctggttgactctta
tgaagaatgtttcaatcaagcatagcaagcttagaaaggaaaaatacaaa
atgtatgttcaaagagaaaaagggcaccaggaagtagaatgaaactaaat
cctgtgttcaaggttattaaatggaattaagggagtgatgaccacagaga
aatatcccacccaggtaagcttattgtttatgtgtttacaattgaacaag
ggatagttatatattatgttaggcattattattacctggtcgttgtttca
tttggatttatatttctgggaatgaactacaatccataaatggaaggcac
acctgtcatccagatcttgaaggttggaagacacaggtttttgatccaga
tattgaggcatatggccatgaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_54692222_54693359
seq2: B6Ng01-188C21.b_48_1188 (reverse)

seq1  ATTTTTAAAATAAATGTTCATTATTGGACAAATTTTGAAAACTCATATAC  50
      ||||| ||||| || ||| |||||||||| | ||| ||||   |||||||
seq2  ATTTTAAAAAT-AACGTTAATTATTGGACCAGTTTGGAAACTCCATATAC  49

seq1  AACATGA--GC-AAATTATAAGACATATCATAATCCTGACCTCAGA-GGA  96
      |||||||  || |||||||||||||||||||||||||||||||||| |||
seq2  AACATGAAGGCAAAATTATAAGACATATCATAATCCTGACCTCAGAGGGA  99

seq1  GGAAAATTTACAGAGGAAGGAAGAGAATGGAGGGCCAGGAAGGGAAGTTG  146
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GGAAAATTTACAGA-GAAGGAAGAGAATGGAGGGCCAGGAAGGGAAGTTG  148

seq1  CCAAAAACGATTTGCTAATTGCTTAAATGTTATAGATAAAATGAGCAGGT  196
      || |||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CC-AAAACGATTTGCTAATTGCTTAAATGTTATAGAT-AAATGAGCAGGT  196

seq1  TTTGGATGTAAGCACATACGGTTTGGAGCTCAAGCAGTTCCTAATCTTGG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGATGTAAGCACATACGGTTTGGAGCTCAAGCAGTTCCTAATCTTGG  246

seq1  GTGAAGAGATTTAAAAGATAGTGGAGGAACCCTAAACATATAGTG-AGTG  295
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GTGAAGAGATTTAAAAGATAGTGGAGGAACCCTAAACATATAGTGAAGTG  296

seq1  ACAGACACATATGTGAGAGAGGTATGATAAG-AATGATGTCCCCATGAGC  344
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  ACAGACACATATGTGAGAGAGGTATGATAAGAAATGATGTCCCCATGAGC  346

seq1  TCTGGTAGTC-AAAGACTTCGTCCTCAGTTGATAGCACTGTTTGGACAGG  393
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTAGTCAAAAGACTTCGTCCTCAGTTGATAGCACTGTTTGGACAGG  396

seq1  ATTTCAAGGTATGGCCTTGCTGGGGGAAATATGTCACTGGAGGTGACACT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAAGGTATGGCCTTGCTGGGGGAAATATGTCACTGGAGGTGACACT  446

seq1  GAAGGTTTCAAAGCCATGTACAAACCAGTCTGTTCTCTCTGCTTCTTTTT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGTTTCAAAGCCATGTACAAACCAGTCTGTTCTCTCTGCTTCTTTTT  496

seq1  TTGTGGTTGAGATATGAGCCCTCAGCTCTCAGATTTCAACCCTAGCTGCC  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGGTTGAGATATGAGCCCTCAGCTCTCAGATTTCAACCCTAGCTGCC  546

seq1  ATGTAAGCTGCTTGTTGCAGTGCAGTCCTTGTCATTATAGACCCTAACCC  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAGCTGCTTGTTGCAGTGCAGTCCTTGTCATTATAGACCCTAACCC  596

seq1  TCTGAATCTTAATCCCCAGGTGAATTCTTCCTTCAATAAGTTCCTTTGAC  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAATCTTAATCCCCAGGTGAATTCTTCCTTCAATAAGTTCCTTTGAC  646

seq1  TATGATGTTTTGCTACAGATATAAAAAAGTAACACAGAGAAAGGATGTAA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATGTTTTGCTACAGATATAAAAAAGTAACACAGAGAAAGGATGTAA  696

seq1  AAGCAGATACATGATGTGAACTGTCGTGGCAACCATGGCTAGGCTGCAAC  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGATACATGATGTGAACTGTCGTGGCAACCATGGCTAGGCTGCAAC  746

seq1  TCCCTCCAATCGTACTTACTAACCACTTCTAACCTTCTTGGTTCTCTCCA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCCAATCGTACTTACTAACCACTTCTAACCTTCTTGGTTCTCTCCA  796

seq1  GCACTTTGAACACGTATAAACAGACTGTCTCTGCGATGACTTCTTGTGCT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTTTGAACACGTATAAACAGACTGTCTCTGCGATGACTTCTTGTGCT  846

seq1  TCCTTTGGTTCATTCTCTGTTGTTTGTCTTGCTTTACTGTTTTACTCTGA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTGGTTCATTCTCTGTTGTTTGTCTTGCTTTACTGTTTTACTCTGA  896

seq1  GATTCTTCCACAGGTTTCCACTGAACCTGCCTGTTTGAGAATTACTTCGT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTTCCACAGGTTTCCACTGAACCTGCCTGTTTGAGAATTACTTCGT  946

seq1  CTTCCCTTCTCCCTTCTCCAGCTCAGAGTACCATCCTGTGAAATTATGAT  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCTTCTCCCTTCTCCAGCTCAGAGTACCATCCTGTGAAATTATGAT  996

seq1  TGGTTTTTCTTTAAGATCCTTAAAATCAGTCCCATAACCCCTAAAGATAT  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTTTCTTTAAGATCCTTAAAATCAGTCCCATAACCCCTAAAGATAT  1046

seq1  AGAAGCAGTCATTAATAGTCTCACAACAACAACAACAACAACAACAACAA  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCAGTCATTAATAGTCTCACAACAACAACAACAACAACAACAACAA  1096

seq1  CAACAACAACAAAGCTCAGGACCATAAGGGTTTAGTGGAGAATTC  1138
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAACAACAAAGCTCAGGACCATAAGGGTTTAGTGGAGAATTC  1141


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