BAC Information

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BAC

Clone NameB6Ng01-189N15
Chromosome4 (Build37)
Map Location 131,772,171 - 131,904,562
singlet/doubletdoublet
Overlap geneLOC664903, Gmeb1, Rnu11, Taf12, 9530096D07Rik, LOC100039864, Trspap1, Rcc1
Upstream geneGm831, EG664832, LOC100039799, Ptpru, Mecr, Sfrs4, EG664865, EG623230, Epb4.1, LOC666480, LOC100039835, Oprd1, LOC664894, Ythdf2
Downstream geneSnhg3, Phactr4, Med18, Sesn2, Atpif1, Dnajc8, Ptafr, Eya3, Xkr8, Smpdl3b, Rpa2, BC013712, LOC100039917, Ppp1r8, Stx12, OTTMUSG00000010099, BC008163, Fgr, Ahdc1, LOC100041932, Wasf2, Gpr3, Cd164l2, Fcnc-ps, Map3k6, Sytl1, D4Ertd196e, LOC100041990, LOC100042018, Wdtc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-189N15.bB6Ng01-189N15.g
ACCGA013761GA013762
length663887
definitionB6Ng01-189N15.b B6Ng01-189N15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(131,903,905 - 131,904,562)(131,772,171 - 131,773,054)
sequence
gaattcttagctggcaagggactccagcaggctctggaatgaagggcttc
atccttttagtgtttcctgtcctactcctgacgtagtgttacgggtacat
ggtagcacacaaccatctataatggaatctgataacctcttctgacatgt
agacatacctgcagataaagcattcatacataaaatatataagtggattt
taaaagtcagtgagagccgggcatggtgtcgcacgcctttaatcccagca
ctcaggaagcagaggcaggcagatttctgagctcaaggccagcctggtct
acaaagtgagttccaggacagccagggctacacagagaaaccctgtctgg
aaaaaccaaaaacaaaatgagattgagggacagaggcttggtgcagtcct
agctctgggaagctgaagcaattaggatttggagtttgaagatagcccga
ggctttaccaaaacaataaaaaaaaatcatttataaggcaagatcagtga
tgggcctttttctataattacattaagccatgtgaatgaataccattctt
tggagaaagacctcagttttcagggtgaagcttggagaaaacttcacagt
ttaccatcccaggagaagatgccaggatggaagaagaagtctacctgaaa
aaggtaagacgac
gaattcctcagtagcccagctagaccttgaatttttgatcctcctgcctc
aggttcccaaagaactaggattataggctgcttctatctgattttgtttc
ctactgattttgttttccttcagtgctgagttccaggccagcctggtcta
cagagcaagttccaggacagccagggttatacagagaaagcttatctgag
aaaagaaacaaacaaacaaacccagaaggcaggtgtggtagtctatgcct
ttaatcttagcatttaaggaggcagtggcagggagatttctctgagttct
aagacagccagagcaacacagagggacccagtctcaaacaaacatttaat
gaaagaaagtcttggattcagttagaaatctagaagaaggaagttaaaga
aagcaatgagtcttcatatcagcctgtggtggcacatggacataatctga
gctcttgggaggtagagtcaagatttagggagaggcaaggtcaacctcag
ctatattacaagttgcatggagccagagctacaaggaaccttgtctcaag
ttttattttactatttcacttattttattttgaggaagtatctcactatg
tagccctggctggtaaaactccctgtgtagataaggctggtttggaactc
acttatccacgagtctctgtttcttgagtgctggaaataaaggtatgtac
cattgtacttcagaaaaaaaaatcttttcagataaggttattgctatgct
actcaggttggcctaagtccatccagctctgccgtcagctgggattaaag
gcatatgccaccatgcctagctcatagtccagttttttttttttttgttt
tttgttttttttgttttttttttttttttgggctttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_131903905_131904562
seq2: B6Ng01-189N15.b_49_711 (reverse)

seq1  GTCGTCTTACC-TTTTCAGGTTGACTTCTGCTTCCATCCTGGCCTCCTCT  49
      ||||||||||| ||||||||| ||||||| ||||||||||||| || |||
seq2  GTCGTCTTACCTTTTTCAGGTAGACTTCTTCTTCCATCCTGGCATCTTCT  50

seq1  CCT-GGATGGTAAACTGTGAAG-TTTCTCCAAGCTTCACCCTGGAAACTG  97
      ||| |||||||||||||||||| |||||||||||||||||||| ||||||
seq2  CCTGGGATGGTAAACTGTGAAGTTTTCTCCAAGCTTCACCCTGAAAACTG  100

seq1  AGGTCTTTCTCCAA--GATGGTATTCATTCACATGGCTTAATGTAATTAT  145
      ||||||||||||||   |||||||||||||||||||||||||||||||||
seq2  AGGTCTTTCTCCAAAGAATGGTATTCATTCACATGGCTTAATGTAATTAT  150

seq1  AGAAAAAGGCCCATCACTGATCTTGCCTTATAAATGATTTTTTTTTATTG  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAAGGCCCATCACTGATCTTGCCTTATAAATGATTTTTTTTTATTG  200

seq1  TTTTGGTAAAGCCTCGGGCTATCTTCAAACTCCAAATCCTAATTGCTTCA  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGTAAAGCCTCGGGCTATCTTCAAACTCCAAATCCTAATTGCTTCA  250

seq1  GCTTCCCAGTGCTAGGACTGCACCAAGCCTCTGTCCCTCAATCTCATTTT  295
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCCAGAGCTAGGACTGCACCAAGCCTCTGTCCCTCAATCTCATTTT  300

seq1  GTTTTTGGTTTTTCCAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTGGTTTTTCCAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTG  350

seq1  GAACTCACTTTGTAGACCAGGCTGGCCTTGAGCTCAGAAATCTGCCTGCC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCACTTTGTAGACCAGGCTGGCCTTGAGCTCAGAAATCTGCCTGCC  400

seq1  TCTGCTTCCTGAGTGCTGGGATTAAAGGCGTGCGACACCATGCCCGGCTC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTTCCTGAGTGCTGGGATTAAAGGCGTGCGACACCATGCCCGGCTC  450

seq1  TCACTGACTTTTAAAATCCACTTATATATTTTATGTATGAATGCTTTATC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGACTTTTAAAATCCACTTATATATTTTATGTATGAATGCTTTATC  500

seq1  TGCAGGTATGTCTACATGTCAGAAGAGGTTATCAGATTCCATTATAGATG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGTATGTCTACATGTCAGAAGAGGTTATCAGATTCCATTATAGATG  550

seq1  GTTGTGTGCTACCATGTACCCGTAACACTACGTCAGGAGTAGGACAGGAA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTGTGCTACCATGTACCCGTAACACTACGTCAGGAGTAGGACAGGAA  600

seq1  ACACTAAAAGGATGAAGCCCTTCATTCCAGAGCCTGCTGGAGTCCCTTGC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTAAAAGGATGAAGCCCTTCATTCCAGAGCCTGCTGGAGTCCCTTGC  650

seq1  CAGCTAAGAATTC  658
      |||||||||||||
seq2  CAGCTAAGAATTC  663

seq1: chr4_131772171_131773054
seq2: B6Ng01-189N15.g_67_953

seq1  GAATTCCTCAGTAGCCCAGCTAGACCTTGAATTTTTGATCCTCCTGCCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCAGTAGCCCAGCTAGACCTTGAATTTTTGATCCTCCTGCCTC  50

seq1  AGGTTCCCAAAGAACTAGGATTATAGGCTGCTTCTATCTGATTTTGTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTCCCAAAGAACTAGGATTATAGGCTGCTTCTATCTGATTTTGTTTC  100

seq1  CTACTGATTTTGTTTTCCTTCAGTGCTGAGTTCCAGGCCAGCCTGGTCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGATTTTGTTTTCCTTCAGTGCTGAGTTCCAGGCCAGCCTGGTCTA  150

seq1  CAGAGCAAGTTCCAGGACAGCCAGGGTTATACAGAGAAAGCTTATCTGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCAAGTTCCAGGACAGCCAGGGTTATACAGAGAAAGCTTATCTGAG  200

seq1  AAAAGAAACAAACAAACAAACCCAGAAGGCAGGTGTGGTAGTCTATGCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAACAAACAAACAAACCCAGAAGGCAGGTGTGGTAGTCTATGCCT  250

seq1  TTAATCTTAGCATTTAAGGAGGCAGTGGCAGGGAGATTTCTCTGAGTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCTTAGCATTTAAGGAGGCAGTGGCAGGGAGATTTCTCTGAGTTCT  300

seq1  AAGACAGCCAGAGCAACACAGAGGGACCCAGTCTCAAACAAACATTTAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAGCCAGAGCAACACAGAGGGACCCAGTCTCAAACAAACATTTAAT  350

seq1  GAAAGAAAGTCTTGGATTCAGTTAGAAATCTAGAAGAAGGAAGTTAAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAAGTCTTGGATTCAGTTAGAAATCTAGAAGAAGGAAGTTAAAGA  400

seq1  AAGCAATGAGTCTTCATATCAGCCTGTGGTGGCACATGGACATAATCTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAATGAGTCTTCATATCAGCCTGTGGTGGCACATGGACATAATCTGA  450

seq1  GCTCTTGGGAGGTAGAGTCAAGATTTAGGGAGAGGCAAGGTCAACCTCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTGGGAGGTAGAGTCAAGATTTAGGGAGAGGCAAGGTCAACCTCAG  500

seq1  CTATATTACAAGTTGCATGGAGCCAGAGCTACAAGGAACCTTGTCTCAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATTACAAGTTGCATGGAGCCAGAGCTACAAGGAACCTTGTCTCAAG  550

seq1  TTTTATTTTACTATTTCACTTATTTTATTTTGAGGAAGTATCTCACTATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTTACTATTTCACTTATTTTATTTTGAGGAAGTATCTCACTATG  600

seq1  TAGCCCTGGCTGGTAAAACTCCCTGTGTAGATAAGGCTGGTTTGGAACTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCCTGGCTGGTAAAACTCCCTGTGTAGATAAGGCTGGTTTGGAACTC  650

seq1  ACTTATCCACGAGTCTCTGTTTCTTGAGTGCTGGAAATAAAGGTATGTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATCCACGAGTCTCTGTTTCTTGAGTGCTGGAAATAAAGGTATGTAC  700

seq1  CATTGTAC-TCAG-AAAAAAAATCTTTTCAGATAAGG-TATTGCTATGCT  747
      |||||||| |||| ||||||||||||||||||||||| ||||||||||||
seq2  CATTGTACTTCAGAAAAAAAAATCTTTTCAGATAAGGTTATTGCTATGCT  750

seq1  ACTCAGGTTGGCCTAAGTCCATCCAGCTCTGCCGTCAGCTGGGATTAAAG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGGTTGGCCTAAGTCCATCCAGCTCTGCCGTCAGCTGGGATTAAAG  800

seq1  GCATATGCCACCATGCCTAGCTCATAGTCCAGTTTTTTTTTTTTTTTGTT  847
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GCATATGCCACCATGCCTAGCTCATAGTCCAG-TTTTTTTTTTTTTTGTT  849

seq1  TTTTGTTTTTTTTGTTTTTTTTTTTTTTTTGGGTTTT-  884
      ||||||||||||||||||||||||||||||||| ||| 
seq2  TTTTGTTTTTTTTGTTTTTTTTTTTTTTTTGGGCTTTT  887