BAC Information

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BAC

Clone NameB6Ng01-190K02
Chromosome4 (Build37)
Map Location 3,458,010 - 3,459,109
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039124, LOC100039141, EG666464, LOC100039044, LOC631371, LOC666513
Downstream geneTmem68, Tgs1, Lyn, LOC621858, Rps20, Mos, Plag1, Chchd7, LOC666586, Rdhe2, 4833413O15Rik, Penk1, A830012C17Rik, LOC100039297, LOC622019
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-190K02.bB6Ng01-190K02.g
ACCGA014338GA014339
length1,1031,177
definitionB6Ng01-190K02.b B6Ng01-190K02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacctattgagccactgtcttccctgcaagatatttttgttatat
aatcttttttaactggtctggtctaaaaaatactgtctctgtgtgtgcat
gtgtgtttgcatgtctctttgtgtatgtttacatgaggacatcaaaagac
agctggaggtgcgacatgtcacaaaccttgcttcctgagactgggtctca
cacaagtctggagttcattgattcagctaggctaattgaccagtaagact
cggggagctacatgcttccaccttctcagtgctgagagtatgtgcacaca
tcaccatgccctacttttttacctgggtcctgggtatcaaattctggccc
tcctgcttttgtggcaagcaatttatagattgaactatctccccaattca
aattttcctttttacccctttaattcttagttgcttttccattgttttaa
caaaacaccatgacaaaggtgaagcatttaatttggggctcacagctcca
ggggattaaagtccacgaccatcagtgtggggagcatggcagcaggcagg
tacaacatggctgtggagttcacatctctatccacaagcacagggtggac
agctaactgggactggagtgggcttttgaaatcttaaggtccatctgcag
aaccatacctcttccacaaggttacacacctcctaatccttcaaaaacag
ttccactaaatgaggaccaagcattcaaatatgcgtgcctatgggggggc
attcttatttaaaccacaccatcttctactcaaactgtagattgcatcac
gtgcatgctaaacaaactctctaccaccgagttatatccctccaacttcc
gctaagtcgctgtacccccatgccatcatcttgtcaccattgttccagga
caacagtagtgacttcaaagagttaaaggcagatgcacatttagcatatc
acacatattattcagtcactgaaatgctaaacttgtggggccactgagct
atacacagacagtcattgtcttccagtcgagctgaggtttaaaacactcg
attagacccagctttgtaatgttcaccgttcatgggacagaaaggtgtgc
cct
gaattcttgagaatgtcttatatgcactggcctgcaaatattcatcttcg
ctagatttattatccttagtccactgaaacatcttttttagtcaacctgg
ttgaaacagaacaccctctgtgagtacagaagaccacaagcctttgtttt
agccctgaatcacaattacaccagatctttaaagataaacgcacaagccc
tggctctactatagggcaaaataaatttgggtaagaggatggtgtgttgg
ggatgccttggtgggagaggcttgtttcatcacatcctgcttatgctgag
gcctgtgtggaaggaaacaacagtctcctatttagatcagagaaacagag
acatctgcttgaagagctctggtaccaccccatacctgccagtcctttcc
catcacagtcttgcttggtcagctcttcctttagttttgtgaaattgtgt
tccaaacttcagcttccttccaataaattcctcattttgtctaaagctag
cctgggaaggtttgggtagaaacccgagtgacgattgtggacacactgct
taattatcctaaaataaatctaatgcactcccggacaaggtccactggag
acttccactttctgccctgggggaatcctgcacatgatcttcatttgata
actcgccttcatctacgaatcatgtacttgcaaagcacaagacaacgaga
cagagcccaatatgcactcttacactgagctaactacagaatgggatatg
gaaagagaagtgagtctgggagatataaatgtttaaaaactccatcctgc
ttaaggtcacaggtccggtgcataaaagagcccttactgtctgctcaccc
tacaatcttttacagcttctgagatgacattccttactctttggtctctt
accaccctttttgaactttcccattcttttactatcttcatactgtccaa
gtgatccttatattttttacaaccttgtttcatttaacttgtctctaatt
tcttagagctgtaataagaagcctccctccggtctataatccttttccaa
attctcaatgtgtatctggccatacttgaatcagatttaagcatggcatt
tatccaggagatacttaatatggtgatatgctcactaacatactagtagt
catagggtgcgcgacaatctgtagtca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_3458010_3459109
seq2: B6Ng01-190K02.b_41_1143

seq1  GAATTCACCTATTGAGCCACTGTCTTCCCTGCAAGATATTTTTGTTATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCTATTGAGCCACTGTCTTCCCTGCAAGATATTTTTGTTATAT  50

seq1  AATCTTTTTTAACTGGTCTGGTCTAAAAAATACTGTCTCTGTGTGTGCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTTTTTAACTGGTCTGGTCTAAAAAATACTGTCTCTGTGTGTGCAT  100

seq1  GTGTGTTTGCATGTCTCTTTGTGTATGTTTACATGAGGACATCAAAAGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTTTGCATGTCTCTTTGTGTATGTTTACATGAGGACATCAAAAGAC  150

seq1  AGCTGGAGGTGCGACATGTCACAAACCTTGCTTCCTGAGACTGGGTCTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGAGGTGCGACATGTCACAAACCTTGCTTCCTGAGACTGGGTCTCA  200

seq1  CACAAGTCTGGAGTTCATTGATTCAGCTAGGCTAATTGACCAGTAAGACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGTCTGGAGTTCATTGATTCAGCTAGGCTAATTGACCAGTAAGACT  250

seq1  CGGGGAGCTACATGCTTCCACCTTCTCAGTGCTGAGAGTATGTGCACACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGGAGCTACATGCTTCCACCTTCTCAGTGCTGAGAGTATGTGCACACA  300

seq1  TCACCATGCCCTACTTTTTTACCTGGGTCCTGGGTATCAAATTCTGGCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCATGCCCTACTTTTTTACCTGGGTCCTGGGTATCAAATTCTGGCCC  350

seq1  TCCTGCTTTTGTGGCAAGCAATTTATAGATTGAACTATCTCCCCAATTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCTTTTGTGGCAAGCAATTTATAGATTGAACTATCTCCCCAATTCA  400

seq1  AATTTTCCTTTTTACCCCTTTAATTCTTAGTTGCTTTTCCATTGTTTTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTCCTTTTTACCCCTTTAATTCTTAGTTGCTTTTCCATTGTTTTAA  450

seq1  CAAAACACCATGACAAAGGTGAAGCATTTAATTTGGGGCTCACAGCTCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACACCATGACAAAGGTGAAGCATTTAATTTGGGGCTCACAGCTCCA  500

seq1  GGGGATTAAAGTCCACGACCATCAGTGTGGGGAGCATGGCAGCAGGCAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGATTAAAGTCCACGACCATCAGTGTGGGGAGCATGGCAGCAGGCAGG  550

seq1  TACAACATGGCTGTGGAGTTCACATCTCTATCCACAAGCACAGGGTGGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAACATGGCTGTGGAGTTCACATCTCTATCCACAAGCACAGGGTGGAC  600

seq1  AGCTAACTGGGACTGGAGTGGGCTTTTGAAATCTTAAGGTCCATCTGCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAACTGGGACTGGAGTGGGCTTTTGAAATCTTAAGGTCCATCTGCAG  650

seq1  AACCATACCTCTTCCACAAGGTTACACACCTCCTAATCCTTCAAAAACAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATACCTCTTCCACAAGGTTACACACCTCCTAATCCTTCAAAAACAG  700

seq1  TTCCACTAAATGAGGACCAAGCATTCAAATATGCGTGCCTAT-GGGGGGC  749
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TTCCACTAAATGAGGACCAAGCATTCAAATATGCGTGCCTATGGGGGGGC  750

seq1  ATTCTTATTTAAACCACACCATCTTCTACTCAAACTGTAGATTGCATCAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTATTTAAACCACACCATCTTCTACTCAAACTGTAGATTGCATCAC  800

seq1  GTGCATGCTAAACAAACTCTCTACCACCGAGTTATAT-CCTCCAACTTCC  848
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GTGCATGCTAAACAAACTCTCTACCACCGAGTTATATCCCTCCAACTTCC  850

seq1  GCTAAGTCGCTGTACCCCCATGCCATCATCTTGTCACCATTGTTCCAGGA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GCTAAGTCGCTGTACCCCCATGCCATCATCTTGTCACCATTGTTCCAGG-  899

seq1  ACAACAGTAGTGACTTAAAAGAGTTAAAGGCAGAGGCACATTTAGCAATA  948
      |||||||||||||||| ||||||||||||||||| ||||||||||| |||
seq2  ACAACAGTAGTGACTTCAAAGAGTTAAAGGCAGATGCACATTTAGC-ATA  948

seq1  TTCACACATATTATTCAGTCACTGAAAGGCTAAAACTTGTGGGG-CAATG  997
       |||||||||||||||||||||||||| ||| |||||||||||| || ||
seq2  -TCACACATATTATTCAGTCACTGAAATGCT-AAACTTGTGGGGCCACTG  996

seq1  GGCTATACACAGACAGTC-TTGTC-TCCAGTCGAGCTGAGGTTTTAAACC  1045
       ||||||||||||||||| ||||| ||||||||||||||||||| |||| 
seq2  AGCTATACACAGACAGTCATTGTCTTCCAGTCGAGCTGAGGTTTAAAACA  1046

seq1  CT-GGTAGGACCCAGTGGTGGTAATTTTCACC-TTCATGGGACA-AAAGG  1092
      || | |  |||||||   | ||||| |||||| ||||||||||| |||||
seq2  CTCGATTAGACCCAG-CTTTGTAATGTTCACCGTTCATGGGACAGAAAGG  1095

seq1  TGTGCCCT  1100
      ||||||||
seq2  TGTGCCCT  1103