BAC Information

Click to search

BAC

Clone NameB6Ng01-191B01
Chromosome4 (Build37)
Map Location 30,856,911 - 30,857,397
singlet/doubletsinglet
Overlap geneLOC100040864
Upstream geneLOC665185, LOC619906
Downstream geneLOC100040891
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-191B01.bB6Ng01-191B01.g
ACCGA014661GA014662
length550810
definitionB6Ng01-191B01.b B6Ng01-191B01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
aaggcccatacctaaacatgataaaagcaatctacagcaaaccagttgct
aacatcaaagtaaatggtgagaaggtggaagcaatcccactaaaatcaag
gactagacaaggctgtccactttctccttacctattcaatattgtacttg
aagtcctagccagagcaattcaacaacaaaaggagatcaagaggatacaa
attggaaaggaagaagtcaaaatatcactttttgcaaatgatatgatagt
atacatgagtgaacctaagaattcaaccacagaactcccaaacctgataa
acagctttagagaagtaactggatataaaattaacttaaacaagtaaatg
gactttctctacacaatggataaacaggatgagaaagaaattagggaaac
aacacacttctcaatagtcacaaatattataaaataccttgccgtgactc
taactaaggaagggaaagatctgtatgataagaatttcaagtctctgaag
aaagaaattaaagaacatctcagaaggaggaaagatctcccatgctcatg

gaattccttctttatgtcctctaccatcatcatgagatatgcttttaaat
ccaggtctaccttttcaggtgtgttagggtgtcctggattgggcgaagtg
ggcgttctgggttctgatgatggtgagtggtcctggcttctgttagtagg
attcttacgtttacctttcgccatctggcaatctctggagttagttgtta
tagttgtctttgttaaaagattgttcctctgttgattttgttaccctcta
tcagcaggcgtgggagacaagctctcttctctgagtttcagtggtcagag
cagtctctgtaggcaagctctcctctctcagggaaggtgtacagttatct
ggtgtttggacctcctcctggctgaaggtgaaggcccaaaacaggatctt
tcccagaagctgtgttgctttggccaggaaggtggccagttgtctggagt
cgaagatgtcgcagcctcagaagctctgtggctcttgccgggaaggtggc
tggttgtctggagctgaggatggtgccgccccagaatctctgcgactctc
tcgcccgtcccagaaacggctggcactctgtattccacacggtcacccgt
gcagcctgccctccgcggagtcccggagccaagaaggctcccgccggcgc
ctgtgccacaaacctctcaggccaggcagaccccttgctctcaccaggaa
ggtggccggctgtctggagctaaagatggcgccgcccagaagctctgcga
ctctctcgctcgtcccagaaacagctggcactctgtattccacacggtca
cccgtgcagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_30856911_30857397
seq2: B6Ng01-191B01.g_527_811

seq1  GCCTCAGAAGCTCTGTGGCTCTTGCCGGGAAGGTGGCTGGTTGTCTGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCAGAAGCTCTGTGGCTCTTGCCGGGAAGGTGGCTGGTTGTCTGGAG  50

seq1  CTGAAGATGGCGCCG-CCCAGAAGCTCTGCGA--CTCTCGCCCGTCCCAG  97
      |||| ||||| |||| ||||||| ||||||||  ||||||||||||||||
seq2  CTGAGGATGGTGCCGCCCCAGAATCTCTGCGACTCTCTCGCCCGTCCCAG  100

seq1  AAACGGCTGGCACTCTGTATTCCACACGGTCACCCGTGCAGCCTGCCCTC  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACGGCTGGCACTCTGTATTCCACACGGTCACCCGTGCAGCCTGCCCTC  150

seq1  CGCGGAGTCCCGGAGCCAAGAAGGCTCCCGCCGGCGCCTGTGCCACAAAC  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCGGAGTCCCGGAGCCAAGAAGGCTCCCGCCGGCGCCTGTGCCACAAAC  200

seq1  CTCTCAGGCCTGGCAGACCCCCGTGCTCTCACCAGGAAGGTGGCCGGCTA  247
      |||||||||| |||||| |||| |||||||||||||||||||||||||| 
seq2  CTCTCAGGCCAGGCAGA-CCCCTTGCTCTCACCAGGAAGGTGGCCGGCTG  249

seq1  TCTGGAGCTGATGATGGCGCCGCCCAGAAGCTCTGCGACTCTCGCCCGTC  297
      ||||||||| | ||||||||||||||||||||||||              
seq2  TCTGGAGCTAAAGATGGCGCCGCCCAGAAGCTCTGC--------------  285

seq1  CCAGAAACGGCTGGCACTCTGTATTCCACACGGTCACCCGTGCAGCCTGC  347
                                                        
seq2  --------------------------------------------------  285

seq1  CCTCCGCGGAGTCCTGGAGCCAAGAAGGCTCCCGCCGGCGCCTGTGCCAC  397
                                                        
seq2  --------------------------------------------------  285

seq1  AAACCTCTCAGGCCAGGCAGACCCCCGTGCTCTCACCAGGAAGGTGGCCG  447
                                                        
seq2  --------------------------------------------------  285

seq1  GCTGTCTGGAGCTGAAGATGGCGCCGCCCAGAAGCTCTGC  487
                                              
seq2  ----------------------------------------  285