BAC Information

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BAC

Clone NameB6Ng01-191C11
Chromosome4 (Build37)
Map Location 64,961,139 - 65,095,655
singlet/doubletdoublet
Overlap genePappa, Astn2
Upstream genenone
Downstream geneTrim32
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-191C11.bB6Ng01-191C11.g
ACCGA014722GA014723
length1,213843
definitionB6Ng01-191C11.b B6Ng01-191C11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(65,094,434 - 65,095,655)(64,961,139 - 64,961,973)
sequence
gaattcactcccagcttcatttggtaagacaaaggaaataggaggctgtt
tgttgttgttgttgttgttgttgtttgtttttgtttttgttttttatttg
tttccaatcctctatgaatatggccacatctggaagcaggcatcataaat
aacaataaggagctctagacacctgctcattatattgttaatgatgaagt
cacaggtcacctccttttattcctttagaaagctgtaattggtgaggtgc
taagcttttcaacaattactcaaatacttcttttatttgcatcatttatt
tattcatctactcaactattaacctaacctctatttatctcttctgtctc
ttcttccacttatctatgcatataattcatccacctatttatatactctt
acactgaactctcttttcactcccactttttctaaggattatttttatgt
cttcatactgcactatggccttcttggttatgcctatgtctgatacaaag
gagcctatcctcagatgacttacaacctaacagtgataagaaaggctata
tatttgtaatttgggtatatttagttgtataaccttaaataagctgccat
ataaatatatcaatagaccaaactcaagaatatcactgtgaactaagaat
tggatcttgtaaccctgactctacaatctcagagttgttacaattcaaac
tttatcttcaatcagggaatgctatagaaataggggttctgcagtacaca
gatatgtctgggcaagttaaccagagaagtatgatgtacaaacagcctta
aagaatggctacagtcgtaatggtaaataataggactggaacctggattt
tgagaatacaactctaagcttcagaatcatgagtgttgggtatctgagct
ccagttactgcattttttgcagtgcaggaagcacacagctaaataaatgc
tgtcagatcttcctctaacactagatctttgatgctatggagaaagtgga
attttagagcattactggtggctaatttctatacctctgctgttcttatg
tgcatacacagagcaagaatacttctaggttcagaatctgtatcttgctc
atatctggtgataactgagtccccagtctttcctaatggagaaatgtgcc
aatagcacccgaagctactattctctcaattccagttaccacacactatc
cttcaagctactt
gaattcagtgctatctacttggagaatgatgcacaaatgggaaagcatag
ggatggagtagaaggctaaaggcttctttaaggagaaagactatagtcat
gacaagaggctccagtgtctgtctctacatagtccatcttcttttccttt
tctttcccctcctacattgttttctctctctctctctctctctctctctc
tctctctctctctctctctctctctccccatccatcagccagccagtcat
atacccatccatccaaccatccatccatccatccatccatccatccatcc
atccatccatgtactctgcgttttttaatgaaaaccaaaaactatattat
aaatttcagtaggctatgtatttaaacagttatttccctgggcaggaaaa
ggaggtcctataaggctaacttctttctgtctctcccaaatgacgtgaag
agttggtgcccaggttacgtttcctctcattttccagttttgaccatatg
gccatccatctgttgttgtgatggtggtgactgtcatttaatgacgcaat
tatagctaagcagaaggccataggagttaagagaggacttaaagagcaga
gccagaagaaaagtcattttcagccctttaataccaactttgtcctggct
gggagatttgcctaggtgtcaggcattaggtgtgggattttgcacttcag
ttctctatgtggaaggaagggaagctaaaagattgctgaggtgtcacaaa
tggttctggccctcatgaagatcttgaacatataagtaaatagacactgg
gagcatgtgggcaccatgtaaacacacactacatcacacacac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_65094434_65095655
seq2: B6Ng01-191C11.b_49_1261 (reverse)

seq1  AAGTAGCCTAGAAGGATTGATGTGTGGATACATGGAAAGTGAGAGAATAG  50
      |||||| || ||||||| | ||||||| ||  ||| || |||||||||| 
seq2  AAGTAG-CTTGAAGGATAG-TGTGTGG-TAACTGG-AATTGAGAGAATA-  45

seq1  GTAGCCTCGGGGTGCTAT--GCACA-TTCT-CATAGAGAAAGAACTGGAG  96
      ||||| || |||||||||  ||||| |||| |||   ||||| ||||| |
seq2  GTAGCTTC-GGGTGCTATTGGCACATTTCTCCATTAGGAAAG-ACTGGGG  93

seq1  ACTCAAAATAAACA-CAGATAAAGAGCAAGATACAGA-TCTGAACCTAGA  144
      ||||  | | | || ||||| | |||||||||||||| ||||||||||||
seq2  ACTC--AGTTATCACCAGAT-ATGAGCAAGATACAGATTCTGAACCTAGA  140

seq1  GCTA-TCTGCCTCTTGTGTATGCACTTAAGGAACAGCAGAGGTATTAGAA  193
        || |||  ||| ||||||||||| ||| |||||||||||||| |||||
seq2  AGTATTCTTGCTC-TGTGTATGCACATAA-GAACAGCAGAGGTA-TAGAA  187

seq1  ATTAGCCACCAGGTAATGCTCTAAAAATTCCACTTTCTCAATAGCATCAA  243
      ||||||||||| |||||||||| |||||||||||||||| ||||||||||
seq2  ATTAGCCACCA-GTAATGCTCT-AAAATTCCACTTTCTCCATAGCATCAA  235

seq1  AGATTCTAGTGTTAGA-GAAGATCTGACAGCATTTATTTAGCTGTGTGCT  292
      ||| |||||||||||| |||||||||||||||||||||||||||||||||
seq2  AGA-TCTAGTGTTAGAGGAAGATCTGACAGCATTTATTTAGCTGTGTGCT  284

seq1  TCCTGCACTGCAAAAAATGCAGTAACTGGAGCTCAGATACCCAACACTCA  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCACTGCAAAAAATGCAGTAACTGGAGCTCAGATACCCAACACTCA  334

seq1  TGATTCTGAAGCTTTAGAGTTGTATTCTCAAAATCCAGGTTCCAGTCCTA  392
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TGATTCTGAAGC-TTAGAGTTGTATTCTCAAAATCCAGGTTCCAGTCCTA  383

seq1  TTATTTACCATTACGACTGTAGCCATTCTTTAAGGCTGTTTGTACATCAT  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTACCATTACGACTGTAGCCATTCTTTAAGGCTGTTTGTACATCAT  433

seq1  ACTTCTCTGGTTAACTTGCCCAGACATATCTGTGTACTGCAGAACCCCTA  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTCTGGTTAACTTGCCCAGACATATCTGTGTACTGCAGAACCCCTA  483

seq1  TTTCTATAGCATTCCCTGATTGAAGATAAAGTTTGAATTGTAACAACTCT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTATAGCATTCCCTGATTGAAGATAAAGTTTGAATTGTAACAACTCT  533

seq1  GAGATTGTAGAGTCAGGGTTACAAGATCCAATTCTTAGTTCACAGTGATA  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTGTAGAGTCAGGGTTACAAGATCCAATTCTTAGTTCACAGTGATA  583

seq1  TTCTTGAGTTTGGTCTATTGATATATTTATATGGCAGCTTATTTAAGGTT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGAGTTTGGTCTATTGATATATTTATATGGCAGCTTATTTAAGGTT  633

seq1  ATACAACTAAATATACCCAAATTACAAATATATAGCCTTTCTTATCACTG  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAACTAAATATACCCAAATTACAAATATATAGCCTTTCTTATCACTG  683

seq1  TTAGGTTGTAAGTCATCTGAGGATAGGCTCCTTTGTATCAGACATAGGCA  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTTGTAAGTCATCTGAGGATAGGCTCCTTTGTATCAGACATAGGCA  733

seq1  TAACCAAGAAGGCCATAGTGCAGTATGAAGACATAAAAATAATCCTTAGA  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCAAGAAGGCCATAGTGCAGTATGAAGACATAAAAATAATCCTTAGA  783

seq1  AAAAGTGGGAGTGAAAAGAGAGTTCAGTGTAAGAGTATATAAATAGGTGG  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTGGGAGTGAAAAGAGAGTTCAGTGTAAGAGTATATAAATAGGTGG  833

seq1  ATGAATTATATGCATAGATAAGTGGAAGAAGAGACAGAAGAGATAAATAG  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATTATATGCATAGATAAGTGGAAGAAGAGACAGAAGAGATAAATAG  883

seq1  AGGTTAGGTTAATAGTTGAGTAGATGAATAAATAAATGATGCAAATAAAA  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTAGGTTAATAGTTGAGTAGATGAATAAATAAATGATGCAAATAAAA  933

seq1  GAAGTATTTGAGTAATTGTTGAAAAGCTTAGCACCTCACCAATTACAGCT  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTATTTGAGTAATTGTTGAAAAGCTTAGCACCTCACCAATTACAGCT  983

seq1  TTCTAAAGGAATAAAAGGAGGTGACCTGTGACTTCATCATTAACAATATA  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAAGGAATAAAAGGAGGTGACCTGTGACTTCATCATTAACAATATA  1033

seq1  ATGAGCAGGTGTCTAGAGCTCCTTATTGTTATTTATGATGCCTGCTTCCA  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGCAGGTGTCTAGAGCTCCTTATTGTTATTTATGATGCCTGCTTCCA  1083

seq1  GATGTGGCCATATTCATAGAGGATTGGAAACAAATAAAAAACAAAAACAA  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGGCCATATTCATAGAGGATTGGAAACAAATAAAAAACAAAAACAA  1133

seq1  AAACAAACAACAACAACAACAACAACAACAAACAGCCTCCTATTTCCTTT  1192
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAACAACAACAACAACAACAACAACAAACAGCCTCCTATTTCCTTT  1183

seq1  GTCTTACCAAATGAAGCTGGGAGTGAATTC  1222
      ||||||||||||||||||||||||||||||
seq2  GTCTTACCAAATGAAGCTGGGAGTGAATTC  1213

seq1: chr4_64961139_64961973
seq2: B6Ng01-191C11.g_69_911

seq1  GAATTCAGTGCTATCTACTTGGAGAATGATGCACAAATGGGAAAGCATAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGCTATCTACTTGGAGAATGATGCACAAATGGGAAAGCATAG  50

seq1  GGATGGAGTAGAAGGCTAAAGGCTTCTTTAAGGAGAAAGACTATAGTCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGAGTAGAAGGCTAAAGGCTTCTTTAAGGAGAAAGACTATAGTCAT  100

seq1  GACAAGAGGCTCCAGTGTCTGTCTCTACATAGTCCATCTTCTTTTCCTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAGAGGCTCCAGTGTCTGTCTCTACATAGTCCATCTTCTTTTCCTTT  150

seq1  TCTTTCCCCTCCTACATTGTTTTCTCTCTCTCTCTCTCTCTCTCTCTCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCCCCTCCTACATTGTTTTCTCTCTCTCTCTCTCTCTCTCTCTCTC  200

seq1  TCTCTCTCTCTCTCTCTCTCTCTCTCCCCATCCATCAGCCAGCCAGTCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTCTCTCTCTCTCCCCATCCATCAGCCAGCCAGTCAT  250

seq1  ATACCCATCCATCCAACCATCCATCCATCCATCCATCCATCCATCCATCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCCATCCATCCAACCATCCATCCATCCATCCATCCATCCATCCATCC  300

seq1  ATCCATCCATGTACTCTGCGTTTTTTAATGAAAACCAAAAACTATATTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATCCATGTACTCTGCGTTTTTTAATGAAAACCAAAAACTATATTAT  350

seq1  AAATTTCAGTAGGCTATGTATTTAAACAGTTATTTCCCTGGGCAGGAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTCAGTAGGCTATGTATTTAAACAGTTATTTCCCTGGGCAGGAAAA  400

seq1  GGAGGTCCTATAAGGCTAACTTCTTTCTGTCTCTCCCAAATGACGTGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGTCCTATAAGGCTAACTTCTTTCTGTCTCTCCCAAATGACGTGAAG  450

seq1  AGTTGGTGCCCAGGTTACGTTTCCTCTCATTTTCCAGTTTTGACCATATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGGTGCCCAGGTTACGTTTCCTCTCATTTTCCAGTTTTGACCATATG  500

seq1  GCCATCCATCTGTTGTTGTGATGGTGGTGACTGTCATTTAATGACGCAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATCCATCTGTTGTTGTGATGGTGGTGACTGTCATTTAATGACGCAAT  550

seq1  TATAGCTAAGCAGAAGGCCATAGGAGTTAAGAGAGGACTTAAAGAGCAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGCTAAGCAGAAGGCCATAGGAGTTAAGAGAGGACTTAAAGAGCAGA  600

seq1  GCCAGAAGAAAAGTCATTTTCAGCCCTTTAATACCAACTTTGTCCTGGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGAAGAAAAGTCATTTTCAGCCCTTTAATACCAACTTTGTCCTGGCT  650

seq1  GGGAGATTTGCCTAGGTGTCAGGCATTAGGTGTGGGA-TTTGCACTTCAG  699
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GGGAGATTTGCCTAGGTGTCAGGCATTAGGTGTGGGATTTTGCACTTCAG  700

seq1  TTCTCTATGTGGAAGGAAGGGAAGCTAAAAGATTGCTGAGGTGTCACAAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTATGTGGAAGGAAGGGAAGCTAAAAGATTGCTGAGGTGTCACAAA  750

seq1  TGGTTCTGG-CCTCATGAAGATCTTGAACATATAAGTAAATAGACAC-AG  797
      ||||||||| |||||||||||||||||||||||||||||||||||||  |
seq2  TGGTTCTGGCCCTCATGAAGATCTTGAACATATAAGTAAATAGACACTGG  800

seq1  GAGCATGTGGGCA-CATGTAAACACACAC-ACA-CACACAC--  835
      ||||||||||||| ||||||||||||||| ||| |||||||  
seq2  GAGCATGTGGGCACCATGTAAACACACACTACATCACACACAC  843