BAC Information

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BAC

Clone NameB6Ng01-191J21
Chromosome4 (Build37)14 (Build37)
Map Location 28,851,339 - 28,851,42595,790,156 - 95,791,328
singlet/doubletsingletsinglet
Overlap geneEpha7
Upstream geneTpm3-rs2, LOC100040842, LOC100040735, LOC230044, LOC665141, LOC100040773
Downstream geneLOC100040907, LOC100040811
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-191J21.bB6Ng01-191J21.g
ACCGA015063GA015064
length5521,174
definitionB6Ng01-191J21.b B6Ng01-191J21.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(28,851,339 - 28,851,425)(95,790,156 - 95,791,328)
sequence
gaattctttcttctacaagatgtctcatttcccatttcctacctaagcca
taggctataggcttattaattgtcaggtgctgcatccatacaaatcatga
aattttctctctagaattttgtctttgatttatgcaattttttataagtt
ttctttttgaggttataacagagtcacatcattttcctttccctttcctc
acttgaacttttagcatacactgcttgatgctctcttcctaagccatggc
ctttcaaaagttgtttttgcttgcatgcacacacacacacacacacacac
acacacacacacacaattgctcagtctgtataccatttcacaaacatgat
ctaaacaaggacaacaatagtcatgctaacatggactaaccaaagcatac
acatggagagacccatggctccagctgcatatggagcagaggatcacctt
atctggcatcactgggaggagaggcccttgataatgtgaaggctctgtgc
cacagggtaggggaagggagtgaggaggagagggtggctgtgttagggga
gc

gaattctaggcagccatactcatgagtacatcctaaacatttatttctat
atatttctaagtgaattttcaaacgtgatttcttcaataaaaatgttttc
aaccagaatatagggcatgtgttactactctaattcactacaaccttttc
atttaatgcatgtgtaatttataatcttcagaatacgttgctggattttt
aagcaattaggatcaagactaatatggtagaattttatttctatcacaga
taattttttgtcatatcatgtgactttgtgtatgttttctccaaactatg
aagaataaggataaatagaagaccctagtcattcaaataaagtcaaatgt
ggccaaactaaagatattcaggtgtttgtaagtttaatggggtactgaat
tgcatagagaagaaagtggatcttgatgttattagacatggttcagaatg
cttgtccttgacgttattacataaaataacaatgcagaaatctaaggtac
atttatggtcagcaaataaaaattgttggcagggatcgcaatgccctgag
gaggatactgtgaccttccagtataactgaagcatgtcagtaagcaacaa
tggtaaattaagataaacaggattgagaaggaatgtagtgagcgaactgg
catgatcatctttttaatgagctctgtagatacaaatttgaaaacataat
taaaatgtacagtttttaaaagcatctatgatttctgtactttttcaaaa
ttacctggtaatttttaccttacaaaaatttaagagcgaattttatctat
ttaatggtaatatcatagcaatcactattcactgaggaaaattactgtgg
tcatattatatccaccaagcaattttattctgatagggtttgtgtcaagt
gtataaagagtttatgtaattataattaagcagtattaagaaaggacact
ctaagtagcatcattattttgctttattctgtgattccctgggcttgatg
ccatctatctgactgacagtgatatattttcatgacttagcatgtcctga
cactttttcattagcaattaaggtattattattgatcatctgttgtttta
aggttttaaaagcttattctattgaaccgcttaaatacggcatgaaaata
ttctttgaacttgacacaggcagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_28851339_28851425
seq2: B6Ng01-191J21.b_443_534 (reverse)

seq1  TTCACAGGATCAAGAGCCTCTCCTCCCATTGAAGTCTGA------CATCT  44
      ||||||  |||||| ||||||||||||| ||| | | ||       ||| 
seq2  TTCACATTATCAAGGGCCTCTCCTCCCAGTGATGCCAGATAAGGTGATC-  49

seq1  GTCTGCTACATATGCAGCTGGAGTCATGGGTCTCTCCATGTGT  87
       |||||| ||||||||||||||| |||||||||||||||||||
seq2  CTCTGCTCCATATGCAGCTGGAGCCATGGGTCTCTCCATGTGT  92


seq1: chr14_95790156_95791328
seq2: B6Ng01-191J21.g_66_1239

seq1  GAATTCTAGGCAGCCATACTCATGAGTACATCCTAAACATTTATTTCTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGGCAGCCATACTCATGAGTACATCCTAAACATTTATTTCTAT  50

seq1  ATATTTCTAAGTGAATTTTCAAACGTGATTTCTTCAATAAAAATGTTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTCTAAGTGAATTTTCAAACGTGATTTCTTCAATAAAAATGTTTTC  100

seq1  AACCAGAATATAGGGCATGTGTTACTACTCTAATTCACTACAACCTTTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGAATATAGGGCATGTGTTACTACTCTAATTCACTACAACCTTTTC  150

seq1  ATTTAATGCATGTGTAATTTATAATCTTCAGAATACGTTGCTGGATTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATGCATGTGTAATTTATAATCTTCAGAATACGTTGCTGGATTTTT  200

seq1  AAGCAATTAGGATCAAGACTAATATGGTAGAATTTTATTTCTATCACAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAATTAGGATCAAGACTAATATGGTAGAATTTTATTTCTATCACAGA  250

seq1  TAATTTTTTGTCATATCATGTGACTTTGTGTATGTTTTCTCCAAACTATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTTTTGTCATATCATGTGACTTTGTGTATGTTTTCTCCAAACTATG  300

seq1  AAGAATAAGGATAAATAGAAGACCCTAGTCATTCAAATAAAGTCAAATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATAAGGATAAATAGAAGACCCTAGTCATTCAAATAAAGTCAAATGT  350

seq1  GGCCAAACTAAAGATATTCAGGTGTTTGTAAGTTTAATGGGGTACTGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAAACTAAAGATATTCAGGTGTTTGTAAGTTTAATGGGGTACTGAAT  400

seq1  TGCATAGAGAAGAAAGTGGATCTTGATGTTATTAGACATGGTTCAGAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATAGAGAAGAAAGTGGATCTTGATGTTATTAGACATGGTTCAGAATG  450

seq1  CTTGTCCTTGACGTTATTACATAAAATAACAATGCAGAAATCTAAGGTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTCCTTGACGTTATTACATAAAATAACAATGCAGAAATCTAAGGTAC  500

seq1  ATTTATGGTCAGCAAATAAAAATTGTTGGCAGGGATCGCAATGCCCTGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATGGTCAGCAAATAAAAATTGTTGGCAGGGATCGCAATGCCCTGAG  550

seq1  GAGGATACTGTGACCTTCCAGTATAACTGAAGCATGTCAGTAAGCAACAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATACTGTGACCTTCCAGTATAACTGAAGCATGTCAGTAAGCAACAA  600

seq1  TGGTAAATTAAGATAAACAGGATTGAGAAGGAATGTAGTGAGCGAACTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAAATTAAGATAAACAGGATTGAGAAGGAATGTAGTGAGCGAACTGG  650

seq1  CATGATCATCTTTTTAATGAGCTCTGTAGATACAAATTTGAAAACATAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATCATCTTTTTAATGAGCTCTGTAGATACAAATTTGAAAACATAAT  700

seq1  TAAAATGTACAGTTTTTAAAAGCATCTATGATTTCTGTACTTTTTCAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATGTACAGTTTTTAAAAGCATCTATGATTTCTGTACTTTTTCAAAA  750

seq1  TTACCTGGTAATTTTTACCTTACAAAAATTTAAGAGCGAATTTTATCTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTGGTAATTTTTACCTTACAAAAATTTAAGAGCGAATTTTATCTAT  800

seq1  TTAATGGTAATATCATAGCAATCACTATTCACTGAGGAAAATTACTGTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGGTAATATCATAGCAATCACTATTCACTGAGGAAAATTACTGTGG  850

seq1  TCATATTATATCCACCAAGCAATTTTATTCTGATAGGGTTTGTGTCAAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATTATATCCACCAAGCAATTTTATTCTGATAGGGTTTGTGTCAAGT  900

seq1  GTATAAAGAGTTTATGTAATTATAATTAAGCAGTATTAAG-AAGGACACT  949
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GTATAAAGAGTTTATGTAATTATAATTAAGCAGTATTAAGAAAGGACACT  950

seq1  CTAAGTAGCATCATTATTTTGCTTTA-TCTGTGATTCCCTGGGCTTGATG  998
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CTAAGTAGCATCATTATTTTGCTTTATTCTGTGATTCCCTGGGCTTGATG  1000

seq1  CCATCTATCTGACTGACAGTGATATATTTTCATGACTTAGCATGTCCTTG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CCATCTATCTGACTGACAGTGATATATTTTCATGACTTAGCATGTCC-TG  1049

seq1  ACACTTTTCATTTAGC-ATTAAGTTAATTATTATTGATCATCTG-TGTTT  1096
      ||||||||   ||||| |||||| | |||||||||||||||||| |||||
seq2  ACACTTTTTCATTAGCAATTAAGGT-ATTATTATTGATCATCTGTTGTTT  1098

seq1  TAAGTTTTAAAAAGTTTTATCTA-TGAAACGC-TAAATACGGCAAATGAA  1144
      |||| ||| ||||| ||  |||| |||| ||| ||||||||||  ||| |
seq2  TAAGGTTTTAAAAGCTTATTCTATTGAACCGCTTAAATACGGC--ATG-A  1145

seq1  AAATATTCTTTGAAAATTTGACAGGCAGG  1173
      ||||||||||||||  |   |||||||||
seq2  AAATATTCTTTGAACTTGACACAGGCAGG  1174


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