BAC Information

Click to search

BAC

Clone NameB6Ng01-191M18
Chromosome4 (Build37)
Map Location 116,771,457 - 116,772,371
singlet/doubletsinglet
Overlap genePtch2
Upstream geneRad54l, 1520402A15Rik, Pomgnt1, Tspan1, 1700042G07Rik, LOC433748, Pik3r3, Mast2, LOC631400, Ipp, Tmem69, Gpbp1l1, LOC622665, Nasp, Akr1a4, Prdx1, Mmachc, 0610037D15Rik, Tesk2, Toe1, Mutyh, Hpdl, LOC625336, LOC100041048, Zswim5, Urod, Hectd3, Eif2b3
Downstream gene9530048O09Rik, LOC100041324, 4833401D15Rik, Plk3, Best4-ps, LOC625405, Rps8, Kif2c, Gm1661, Tmem53, 4931406I20Rik, LOC100041093, Prnpip1, Dmap1, LOC433749, Klf17, Ppia-ps4_1138.1, Slc6a9, B4galt2, Atp6v0b, Dph2, Ipo13, Artn, St3gal3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-191M18.bB6Ng01-191M18.g
ACCGA015201GA015202
length913369
definitionB6Ng01-191M18.b B6Ng01-191M18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccctgtgtcacctcagcgaccttgaccttgggtcctcctgcagtg
gacccctttgtgttgagattagtaagaccacagtctcactggtcttttct
ctatagctgaggagttagttgatggagttgagagctgaagagacattttt
gcttcctgttttgctaggactggaagtggaagaagcaagaccctcagtta
gcagagtttcaaatagaggtcaagactctccttggctgtaaatgtggtgt
gttttcctttccttttttgtttttgttttttgttttctgttgttgttgtt
gttgttgttgtaggttagggaccaaacaccaataccctgatcaacttaaa
actaagaaacttgctgggcagtggtggagtgcacctaggaggcagaggcc
agaggatctctgagcttgaggccagcttggtcttaagagtttcagctggt
ggtggcgcacgcctttaatcccagcactcgggaggcagaggcaggtggat
ttctgagtttgaggccagcctggtctacaaaatgagttccaggacagcca
gggctatacagagaaaccctgtctcagaaaaagaaaaaaaaaaaaaaaga
gtgagtttcagagcaggcagaaacccctgtctcaaataaaaaataaaaaa
atttaaaaaaaggaggtggagcctcaaaagtaaatagttattaggccgga
agtgtctcagtgagtaaagcacttccggtgcacacggaacctgagtttgg
atccccagcatctgtgtaaaagtcaggtacagcagcgcacacctgtaacc
ccagcactgggtcgagtgtggcaaggggcattctgagattggcagctctc
tgacagaacccatgggctccagctcagcagaaccttgtctccaaacaaaa
ggtggagggactg
cacacccctaagccccttaccccataaaaccccctagctttcgagcctcg
tggccgacatccattatctcctgtgtgggatgcatgtcagtccggagctc
cgtcattaaactaccgcatgtaattacatcagggtggtctattcatgatt
ctttgggtgcatgccgaatcgggaatggagtgggggtttccccactaagt
tctatcacctgtgagcctccagatgggtggcagatacagaaactgaggct
tctgcacaagcaacaagtgttcttagcctctagtccatctctccaagccc
aaactttatactttaaagggcatcttccaggaaggaaggaaggaaggaag
gagggaaggaaggaaggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_116771457_116772371
seq2: B6Ng01-191M18.b_49_961

seq1  GAATTCCCTGTGTCACCTCAGCGACCTTGACCTTGGGTCCTCCTGCAGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTGTGTCACCTCAGCGACCTTGACCTTGGGTCCTCCTGCAGTG  50

seq1  GACCCCTTTGTGTTGAGATTAGTAAGACCACAGTCTCACTGGTCTTTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCCTTTGTGTTGAGATTAGTAAGACCACAGTCTCACTGGTCTTTTCT  100

seq1  CTATAGCTGAGGAGTTAGTTGATGGAGTTGAGAGCTGAAGAGACATTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAGCTGAGGAGTTAGTTGATGGAGTTGAGAGCTGAAGAGACATTTTT  150

seq1  GCTTCCTGTTTTGCTAGGACTGGAAGTGGAAGAAGCAAGACCCTCAGTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCTGTTTTGCTAGGACTGGAAGTGGAAGAAGCAAGACCCTCAGTTA  200

seq1  GCAGAGTTTCAAATAGAGGTCAAGACTCTCCTTGGCTGTAAATGTGGTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGTTTCAAATAGAGGTCAAGACTCTCCTTGGCTGTAAATGTGGTGT  250

seq1  GTTTTCCTTTCCTTTTTTGTTTTTGTTTTTTGTTTTCTGTTGTTGTTGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCCTTTCCTTTTTTGTTTTTGTTTTTTGTTTTCTGTTGTTGTTGTT  300

seq1  GTTGTTGTTGTAGGTTAGGGACCAAACACCAATACCCTGATCAACTTAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTGTTGTAGGTTAGGGACCAAACACCAATACCCTGATCAACTTAAA  350

seq1  ACTAAGAAACTTGCTGGGCAGTGGTGGAGTGCACCTAGGAGGCAGAGGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGAAACTTGCTGGGCAGTGGTGGAGTGCACCTAGGAGGCAGAGGCC  400

seq1  AGAGGATCTCTGAGCTTGAGGCCAGCTTGGTCTTAAGAGTTTCAGCTGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGATCTCTGAGCTTGAGGCCAGCTTGGTCTTAAGAGTTTCAGCTGGT  450

seq1  GGTGGCGCACGCCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGTGGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCGCACGCCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGTGGAT  500

seq1  TTCTGAGTTTGAGGCCAGCCTGGTCTACAAAATGAGTTCCAGGACAGCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAGTTTGAGGCCAGCCTGGTCTACAAAATGAGTTCCAGGACAGCCA  550

seq1  GGGCTATACAGAGAAACCCTGTCTCAGAAAAAGAAAAAAAAAAAAAAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTATACAGAGAAACCCTGTCTCAGAAAAAGAAAAAAAAAAAAAAAGA  600

seq1  GTGAGTTTCAGAGCAGGCAGAAACCCCTGTCTCAAATAAAAAATAAAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTTTCAGAGCAGGCAGAAACCCCTGTCTCAAATAAAAAATAAAAAA  650

seq1  ATTTAAAAAAAGGAGGTGGAGCCTCAAAAGTAAATAGTTATTAGGCCGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAAAAAAGGAGGTGGAGCCTCAAAAGTAAATAGTTATTAGGCCGGA  700

seq1  AGTGTCTCAGTGAGTAAAGCACTTCCGGTGCACACGGAACCTGAGTTTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCTCAGTGAGTAAAGCACTTCCGGTGCACACGGAACCTGAGTTTGG  750

seq1  ATCCCCAGCATCTGTGTAAAAGTCAGGTACAGCAGCGCACACCTGTAACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCAGCATCTGTGTAAAAGTCAGGTACAGCAGCGCACACCTGTAACC  800

seq1  CCAGCACTGGG-CGAGTGTGGC-AGGGGCATTCTGAGATTGGCAGCTCAT  848
      ||||||||||| |||||||||| ||||||||||||||||||||||||| |
seq2  CCAGCACTGGGTCGAGTGTGGCAAGGGGCATTCTGAGATTGGCAGCTC-T  849

seq1  CTGACAGAACCCATGGGCTCCAGCTCAGGCAGAAACCTTGTCTCCAAAAC  898
      ||||||||||||||||||||||||||| |||| |||||||||||| ||||
seq2  CTGACAGAACCCATGGGCTCCAGCTCA-GCAG-AACCTTGTCTCC-AAAC  896

seq1  AGAAGGTGGAGGGACTG  915
      | |||||||||||||||
seq2  AAAAGGTGGAGGGACTG  913