BAC Information

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BAC

Clone NameB6Ng01-192I06
Chromosome4 (Build37)
Map Location 133,828,262 - 133,829,178
singlet/doubletsinglet
Overlap genenone
Upstream geneD4Ertd196e, LOC100041990, LOC100042018, Wdtc1, Slc9a1, 4732473B16Rik, 2300002D11Rik, 1810019J16Rik, Nudc, Nr0b2, Gpatch3, Atpbd1b, Sfn, Zdhhc18, LOC545683, Pigv, Arid1a, Rps6ka1, 4930429E23Rik, LOC100042151, Hmgn2, Dhdds, Lin28, Aim1l, Cd52, Ubxd5, Sh3bgrl3, Ccdc21, EG665186, Catsper4, Cnksr1, Zfp593, Grrp1
Downstream genePdik1l, Trim63, Slc30a2, Extl1, LOC434166, Pafah2, Stmn1, Paqr7, 2610002D18Rik, 2410166I05Rik, Sepn1, Man1c1, Ldlrap1, Tmem57, Rhd, Tmem50a, D4Wsu53e, Syf2, Runx3, Clic4, LOC676072
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-192I06.b
ACCGA015737
length919
definitionB6Ng01-192I06.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaggttattttcagatacctagtttgaagtcagtctagagtaaa
aaaaaccctctctcaaaaaagaatttttttttcaaattgaagtacaataa
tatatctgaagtataaaaattgtatgtgttaaaatcaggagcacttgcct
tgcacctgtgaggaccagggagtgatgcctagaactgaaaagtcacctgc
agtttgctgagttgacacaatgtcacctaaggcaaaaaccaaaatcatgt
gggttcactagaatccctgggtgcatggcctctttaagttaggcgtgcta
gcagaggcatgctgggcaccccaacacaggatccctcaacttagggtcca
tgacaatggactcctgatatttgtactcccttgacattataggcaaacat
tttcctgaggaaagcaggcagtgccttcaccagattctgccaaggtgggg
acaatcaaagctatatctggagagggctcagtgattctttccttcctcct
ctcacgggaatccttgcggtgtgttttgatgacgtcgttgttcttgtttt
atgggaaagggtcacactatgcagccctggctgaccagaactctgctctc
ttagaaacttcaaagacacgagcaaagatgacgaactcgacatgcaatga
gatgtaattatcgttttcatttggcagctatgggaactgaggctcaaatg
aatggatgaccatttatggaaggacacattttacttaggtggctatttgc
aaaagttactcttccataccggatctttcgcgtgctagaccacaacagct
tcagtaataccaaattgcttaacttcggctcaaaacaggttaagcttgaa
ataccaggttgaacaggagaagaaaatttcaaagcccagggctactccct
tccccttcccctcccctcc
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_133828262_133829178
seq2: B6Ng01-192I06.b_44_962

seq1  GAATTCAAGGTTATTTTCAGATACCTAGTTTGAAGTCAGTCTAGAGTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGTTATTTTCAGATACCTAGTTTGAAGTCAGTCTAGAGTAAA  50

seq1  AAAAACCCTCTCTCAAAAAAGAATTTTTTTTTCAAATTGAAGTACAATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACCCTCTCTCAAAAAAGAATTTTTTTTTCAAATTGAAGTACAATAA  100

seq1  TATATCTGAAGTATAAAAATTGTATGTGTTAAAATCAGGAGCACTTGCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCTGAAGTATAAAAATTGTATGTGTTAAAATCAGGAGCACTTGCCT  150

seq1  TGCACCTGTGAGGACCAGGGAGTGATGCCTAGAACTGAAAAGTCACCTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACCTGTGAGGACCAGGGAGTGATGCCTAGAACTGAAAAGTCACCTGC  200

seq1  AGTTTGCTGAGTTGACACAATGTCACCTAAGGCAAAAACCAAAATCATGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGCTGAGTTGACACAATGTCACCTAAGGCAAAAACCAAAATCATGT  250

seq1  GGGTTCACTAGAATCCCTGGGTGCATGGCCTCTTTAAGTTAGGCGTGCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTCACTAGAATCCCTGGGTGCATGGCCTCTTTAAGTTAGGCGTGCTA  300

seq1  GCAGAGGCATGCTGGGCACCCCAACACAGGATCCCTCAACTTAGGGTCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGGCATGCTGGGCACCCCAACACAGGATCCCTCAACTTAGGGTCCA  350

seq1  TGACAATGGACTCCTGATATTTGTACTCCCTTGACATTATAGGCAAACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAATGGACTCCTGATATTTGTACTCCCTTGACATTATAGGCAAACAT  400

seq1  TTTCCTGAGGAAAGCAGGCAGTGCCTTCACCAGATTCTGCCAAGGTGGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTGAGGAAAGCAGGCAGTGCCTTCACCAGATTCTGCCAAGGTGGGG  450

seq1  ACAATCAAAGCTATATCTGGAGAGGGCTCAGTGATTCTTTCCTTCCTCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCAAAGCTATATCTGGAGAGGGCTCAGTGATTCTTTCCTTCCTCCT  500

seq1  CTCACGGGAATCCTTGCGGTGTGTTTTGATGACGTCGTTGTTCTTGTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACGGGAATCCTTGCGGTGTGTTTTGATGACGTCGTTGTTCTTGTTTT  550

seq1  ATGGGAAAGGGTCACACTATGCAGCCCTGGCTGACCAGAACTCTGCTCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGAAAGGGTCACACTATGCAGCCCTGGCTGACCAGAACTCTGCTCTC  600

seq1  TTAGAAACTTCAAAGACACGAGCAAAGATGACGAACTCGACATGCAATGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAACTTCAAAGACACGAGCAAAGATGACGAACTCGACATGCAATGA  650

seq1  GATGTAATTATCGTTTTCATTTGGCAGCTATGGGAACTGAGGCTCAAATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTAATTATCGTTTTCATTTGGCAGCTATGGGAACTGAGGCTCAAATG  700

seq1  AATGGATGACCATTTATGGAAGGACACATTTTACTTAGGTGGCTATTTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGATGACCATTTATGGAAGGACACATTTTACTTAGGTGGCTATTTGC  750

seq1  AAAAGTTACTCTTCCATACCGGATCTTTCGCGTGCTAGACCACAACAGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTTACTCTTCCATACCGGATCTTTCGCGTGCTAGACCACAACAGCT  800

seq1  TCAGTAATACCAAATTGCTTAACTTCGGCTCAAAACAGGTTAAGCTTGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTAATACCAAATTGCTTAACTTCGGCTCAAAACAGGTTAAGCTTGAA  850

seq1  ATACCAGGTTGAACAGGAGAAGAAAATTTCAAAGCCCAGGGCTACTCCCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCAGGTTGAACAGGAGAAGAAAATTTCAAAGCCCAGGGCTACTCCCT  900

seq1  --CCCCTCCCCTCCCCTCC  917
        ||| |||||||||||||
seq2  TCCCCTTCCCCTCCCCTCC  919