BAC Information

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BAC

Clone NameB6Ng01-193D09
Chromosome4 (Build37)
Map Location 8,303,409 - 8,304,423
singlet/doubletsinglet
Overlap genenone
Upstream geneCar8, LOC100039494
Downstream geneLOC100039505, LOC100039478, Rab2, EG666752, LOC666760, Chd7, LOC666782, LOC100039584, 4933402J24Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-193D09.bB6Ng01-193D09.g
ACCGA016247GA016248
length1,2021,018
definitionB6Ng01-193D09.b B6Ng01-193D09.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgtttaattgcattatttggttctcttgagtctaacttcttctt
tgtatatattggatatttaaccctctattggatgtaggattgattggtaa
agatcaaactgttggttgccattttgtcctattggtagtatcctttgcct
tacaaaagctttgcaattttatgaggccccatttgtcggttcttgatctt
agagcataagccattggtgtgctgctcaggaacttttcccctgtacacat
gtgtttgagactttcccccacttgctcttctattagtttcagtgtatctg
gttttatgtggaggttcttgacccacttggatttgagctttgtacagtga
gataagaatggatcaattcacattcttctacatgttgactgccagttata
ccagcaccatttgttgaaaatgctgtcatttttccactggatggttttag
ttcctttgtcaaaaatcaagtgagcataggtatgtgggctcatttctggg
tcttcaattctattccattgatctacctgcctgttactataacaatagca
tgcaatttttatcactattgctctgtagaacagcttgaggtcagggatag
tgagtcccccagaagttcttttattgttgataattgttttcactatcctg
ggttttttttgttattccaaatgaatttgggaattgctgtttctaactct
aagaagaattgaattggaattttgatggggattgcattgattttatagat
ggccattccatgagcatgggagatatttctatcttatgaggtcttcttgg
atttctttcttcagagacgtgaaattcttgtcatacagatctttccttgt
ttagttagagtcacaccaagatattttatattgtttctgactattgtgaa
gggtatcattttcctaatttctttctcaacctatttatcctttgagatag
gaaggctactgatttgagttaattttatatacggtcactttgctgagtgt
ttatcagctgtgggagttctctggtggatttttggggtcacttagtatac
tatcatatcatctgcaatagtgatattttacttttccttctagttggttt
ccctttggacttctttgtgctatgctctagctagacttcagtacattgtg
gaaccggctaagccattctctgaaaggtaaagacccctgtagagtagttc
tc

gaattcctgatgctatacagctattttctcagatttgaaacattccatct
tggatggaagctagtgaagactcaggaagttctaaatggaagtggaacag
accatcctgcagagaaactccttaaacaaacaactcggtagctgcaggaa
gtccttgaagcaggttcctgctttcctaaacatatataagcagtgtggat
gtctcgggactctgagctgcctgggaaaggcagagatgtgcacagagctg
gtcagaatcaatcaaaggctctgctgccccagactgacgcagatctgttc
tttcagtctgggcttccttgtgagtctggcacattcccatcttcacacag
caagttttgcacattctgcaaagcatatgtgtggagaaagttcacataaa
acacagggacagagtaaaaagtggtaggaggaatagagaactaagcaagt
agagatgtaagacgaacaaagatgttccttaacatggaaaggcagtgtgg
ggaagtttgcttgagaaaagtgtgccaataatgtcactgacagtgcttgt
gtgtcagaagagtcccaaagctgacacaaaatgctggcgaccacagaact
caaacacatgagtagaggcatctcacttggcaaaacacttcacagaaaag
tcagccatgatgtccaccaatatagctggattaaatgttactcagatcaa
tttagcccaggatgttcccatgtagtgtctattatggtctcaatgtttaa
ataataccctggggtagcattctagaaagtaaaaattaagaacaattcta
tatccaaatttgaggcatagtccacaaagtacaaagtctagactctaaag
ttaacagatcataagacgagaaagtaagaaacttgttcgagattcaactt
cagatggtagattcccagagtccagacactcatgaaactggggcaggaag
ataggtagatcgtgccacgacatcctggggctatagtgagaactctagga
ggggagggggaaggggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_8303409_8304423
seq2: B6Ng01-193D09.g_66_1082

seq1  GAATTCCTGATGCTATACAGCTATTTTCTCAGATTTGAAACATTCCATCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGATGCTATACAGCTATTTTCTCAGATTTGAAACATTCCATCT  50

seq1  TGGATGGAAGCTAGTGAAGACTCAGGAAGTTCTAAATGGAAGTGGAACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGGAAGCTAGTGAAGACTCAGGAAGTTCTAAATGGAAGTGGAACAG  100

seq1  ACCATCCTGCAGAGAAACTCCTTAAACAAACAACTCGGTAGCTGCAGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATCCTGCAGAGAAACTCCTTAAACAAACAACTCGGTAGCTGCAGGAA  150

seq1  GTCCTTGAAGCAGGTTCCTGCTTTCCTAAACATATATAAGCAGTGTGGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTGAAGCAGGTTCCTGCTTTCCTAAACATATATAAGCAGTGTGGAT  200

seq1  GTCTCGGGACTCTGAGCTGCCTGGGAAAGGCAGAGATGTGCACAGAGCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCGGGACTCTGAGCTGCCTGGGAAAGGCAGAGATGTGCACAGAGCTG  250

seq1  GTCAGAATCAATCAAAGGCTCTGCTGCCCCAGACTGACGCAGATCTGTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGAATCAATCAAAGGCTCTGCTGCCCCAGACTGACGCAGATCTGTTC  300

seq1  TTTCAGTCTGGGCTTCCTTGTGAGTCTGGCACATTCCCATCTTCACACAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGTCTGGGCTTCCTTGTGAGTCTGGCACATTCCCATCTTCACACAG  350

seq1  CAAGTTTTGCACATTCTGCAAAGCATATGTGTGGAGAAAGTTCACATAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTTTGCACATTCTGCAAAGCATATGTGTGGAGAAAGTTCACATAAA  400

seq1  ACACAGGGACAGAGTAAAAAGTGGTAGGAGGAATAGAGAACTAAGCAAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGGGACAGAGTAAAAAGTGGTAGGAGGAATAGAGAACTAAGCAAGT  450

seq1  AGAGATGTAAGACGAACAAAGATGTTCCTTAACATGGAAAGGCAGTGTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATGTAAGACGAACAAAGATGTTCCTTAACATGGAAAGGCAGTGTGG  500

seq1  GGAAGTTTGCTTGAGAAAAGTGTGCCAATAATGTCACTGACAGTGCTTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTTTGCTTGAGAAAAGTGTGCCAATAATGTCACTGACAGTGCTTGT  550

seq1  GTGTCAGAAGAGTCCCAAAGCTGACACAAAATGCTGGCGACCACAGAACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCAGAAGAGTCCCAAAGCTGACACAAAATGCTGGCGACCACAGAACT  600

seq1  CAAACACATGAGTAGAGGCATCTCACTTGGCAAAACACTTCACAGAAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACACATGAGTAGAGGCATCTCACTTGGCAAAACACTTCACAGAAAAG  650

seq1  TCAGCCATGATGTCCACCAATATAGCTGGATTAAATGTTACTCAGATCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCCATGATGTCCACCAATATAGCTGGATTAAATGTTACTCAGATCAA  700

seq1  TTTAGCCCAGGATGTTCCCATGTAGTGTCTATTATGGTCTCAATGTTTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCCCAGGATGTTCCCATGTAGTGTCTATTATGGTCTCAATGTTTAA  750

seq1  ATAATACCCTGGGGTAGCATTCTAGAAAGTAAAAATTAAGAACAATTCTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATACCCTGGGGTAGCATTCTAGAAAGTAAAAATTAAGAACAATTCTA  800

seq1  TATCCAAATTTGAGGCATAGTCCACAAAGTACAAAGTCTAGACTCTAAAA  850
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TATCCAAATTTGAGGCATAGTCCACAAAGTACAAAGTCTAGACTCT-AAA  849

seq1  GTTAACAGATCATAAGACGAGAAAGTAAGAAACTTGTTCGAGATTCAACT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAACAGATCATAAGACGAGAAAGTAAGAAACTTGTTCGAGATTCAACT  899

seq1  TCAGATGGTAGATTCCCAGAGTCCAGACACTCATGAAACTGGGGCAGGAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATGGTAGATTCCCAGAGTCCAGACACTCATGAAACTGGGGCAGGAA  949

seq1  GATAGGTAAGATCGTGCCACGACATCCT-GGGCTATAGTGAG-ACTCTAG  998
      ||||||| |||||||||||||||||||| ||||||||||||| |||||||
seq2  GATAGGT-AGATCGTGCCACGACATCCTGGGGCTATAGTGAGAACTCTAG  998

seq1  GAGGGGAGGGG--AGGGGA  1015
      |||||||||||  ||||||
seq2  GAGGGGAGGGGGAAGGGGA  1017


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