BAC Information

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BAC

Clone NameB6Ng01-193G20
Chromosome4 (Build37)
Map Location 146,994,236 - 146,994,914
singlet/doubletsinglet
Overlap genenone
Upstream geneOTTMUSG00000010105, LOC666445, MGC117846, OTTMUSG00000010694, LOC626480, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498, LOC100043034, LOC666514, LOC100041561, LOC100041570, OTTMUSG00000010657, LOC384087, LOC666546, LOC666557, LOC545716, LOC666574, LOC666581, EG666588, LOC627701, OTTMUSG00000010671, LOC545718, OTTMUSG00000010673, 2610305D13Rik
Downstream geneLOC666618, LOC100043100, LOC666640, LOC194189, LOC666652, LOC100041677, LOC277692, MGC67181, D4Wsu114e, Fv1, Mfn2, Plod1, 2510039O18Rik, Nppb, Nppa, Clcn6, Mthfr, LOC433806, Agtrap, 2610109H07Rik, Mad2l2, Fbxo6, Fbxo44, Fbxo2, Ptchd2, Ubiad1, Frap1, Angptl7, Exosc10, LOC100043151, Srm, Masp2, Tardbp
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-193G20.bB6Ng01-193G20.g
ACCGA016403GA016404
length873651
definitionB6Ng01-193G20.b B6Ng01-193G20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccattggttcacctatctagttctatacccgtaatgtgcaaattt
ttattactatttttctgctataaagcttaaagttacagatattgatacct
ccagaagttttgttgttgttgttgttgttgtttttgttgttgttgttcag
gaatattttatctatcctgtgttttgttttgttttgttttttcttttcca
tatgaagctgagaatttttctttaaagttctgtgaaatttttttctggaa
ttttgatgggaattgccctgaatctctatattgctttttggtaagatgga
catattcatgtgcttattccatttatacatgagcaagggtgatttttcca
tcttctggtagctttctgtttctttcttaagatacttgaatttcttgtct
ttcatttttttacttgcttagttagaggtagatgaatgtattttattttg
tttgtggctaatataatgtgttctgtttccctaacttcttttcagcttgt
ttatcactttgtgtggggcagagctaatgatttcttcaagtcaattgtgt
atgcagatactttgctacaaagtttatcaatgtaatttctggaaggattt
tttgggctcacttatatatactatcatattagctgaaaatagaaaactca
ctatttctttctttccaaattgtatccccttgatttcttttagttgcctt
attgcttgagctagaacttctaatacaatatgaaaaagacacagaggcag
agactgccttttctttttttttttttacttttaaaaaatatttttattgg
gtattttcctcatttacatttccaatgctatcccaaaagtccccataccc
ccccctccacttccctaccgacg
gaattcactctgtagacctggctggccttgaactcagaaatccgcctgcc
tctgcctcccaagtgctgggattaaaggcatgcaccaccaccgcctggct
tactatcacttgctatatcaaatatttttaaagtagacaaaggtcaaata
gctatatgtagtggtcagacaaggccataaccttctcatctgtggggaat
tgcaggctggtctccagtcgagctgaggtctgaaccccggtggtcataat
tcacctacatgacacagtaggcattccctcatgctcctggaactcaggcc
cctgcataaggcacaacctcccacagcccccacaagagaagcatggtcag
tagtcaagtaagcaatggcccaagcttctgaccttcaggctaaactcctc
cccagttacctagcaacagtgaagaccataaaaaggtgtgctcagccccc
accttgctctctctcactcctttgtcctctaacctctcacttctctcttc
ttttccctttctctttgtcttctctctctatctttgttctctcctctcct
ctactatccttctcctccctcccctcctccctctctctctctctctctct
ctctctctctctctctctctctctctctctctctccttctcccttctctc
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_146994236_146994914
seq2: B6Ng01-193G20.g_67_717

seq1  GAATTCACTCTATAGACCTGGCTGGCCTCGAACTCAGGAATCCGCTTGCC  50
      ||||||||||| |||||||||||||||| |||||||| ||||||| ||||
seq2  GAATTCACTCTGTAGACCTGGCTGGCCTTGAACTCAGAAATCCGCCTGCC  50

seq1  TCTGCCTCCCAAGTGCTGGGATTAAAGGCATGCAACACCACCGCCTGGCT  100
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TCTGCCTCCCAAGTGCTGGGATTAAAGGCATGCACCACCACCGCCTGGCT  100

seq1  TACTATCACTTGCTATATCAAATATTTTTAAAGTAGACAAAGGTCAAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATCACTTGCTATATCAAATATTTTTAAAGTAGACAAAGGTCAAATA  150

seq1  GCTATATGTATTGGTCAGACAAGGCCATAACCTTCTCATCTGTGGGGAAT  200
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GCTATATGTAGTGGTCAGACAAGGCCATAACCTTCTCATCTGTGGGGAAT  200

seq1  TGCAGGCTGGTCTCCAGTCGAGCTGAGGTCTGAACCCCGATGGTCATAAT  250
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TGCAGGCTGGTCTCCAGTCGAGCTGAGGTCTGAACCCCGGTGGTCATAAT  250

seq1  TCACCTACATGACACAGTAGGCATTCCCTCATGCTCCTGGAACTCAGGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTACATGACACAGTAGGCATTCCCTCATGCTCCTGGAACTCAGGCC  300

seq1  CCTGCATAAGGCACAACCTCCCACAGCCCCCACAAGAGAAGCATGGTCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCATAAGGCACAACCTCCCACAGCCCCCACAAGAGAAGCATGGTCAG  350

seq1  TAGTCAAGTAAGCAATGGCCCAAGCTTCTGACCTTCAGGCTAAACTCCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCAAGTAAGCAATGGCCCAAGCTTCTGACCTTCAGGCTAAACTCCTC  400

seq1  CCCAGTTACCTAGCAACAGTGAAGACCATAAAAAGGTGTGCTCAGCCCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTTACCTAGCAACAGTGAAGACCATAAAAAGGTGTGCTCAGCCCCC  450

seq1  ACCTTGCTCTCTCTCACTCCTTTGTCCTCTAACCTCTCACTTCTCTCTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGCTCTCTCTCACTCCTTTGTCCTCTAACCTCTCACTTCTCTCTTC  500

seq1  TTTTCCCTTTCTC--TGTCTTCTCTCTCCTCTCTCCTTTATCTTTGTTCT  548
      |||||||||||||  |||||||||||||          ||||||||||||
seq2  TTTTCCCTTTCTCTTTGTCTTCTCTCTC----------TATCTTTGTTCT  540

seq1  CTCCTCTCCTCTACTATCCTTCTCCTCCCTCCCCTCCTCTTCTCTCTCTC  598
      |||||||||||||||||||||||||||||||||||||||  |||||||||
seq2  CTCCTCTCCTCTACTATCCTTCTCCTCCCTCCCCTCCTC-CCTCTCTCTC  589

seq1  TCTCTCTCTCCCTCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  648
      |||||||||| ||||||| |||||||||||||||||||||||||||  ||
seq2  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTTC  639

seq1  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  679
      || || |||||||                  
seq2  TCCCT-TCTCTCT------------------  651