BAC Information

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BAC

Clone NameB6Ng01-193N24
Chromosome4 (Build37)
Map Location 12,570,940 - 12,572,039
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039862, Gem, Cdh17, Ppm2c, Tmem67, C430048L16Rik, LOC230010, LOC623671, LOC100039958, Rbm12b, 6720467C03Rik, LOC545592
Downstream geneOTTMUSG00000004461, LOC100039988
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-193N24.bB6Ng01-193N24.g
ACCGA016720GA016721
length1,1111,095
definitionB6Ng01-193N24.b B6Ng01-193N24.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttgctttagaagatatttgtttagggataatttgtttggtagtt
gtatttcctgatgaccagtgacctccctaaatgttctggagttctatgga
gcattaaacgtctaaatacacatcaaagttctgatgtaatcagtgccatg
gcccatgtgtctaacagtagctttcctctcaggtagttaaaatatcccag
agttcaggaatgtcacaggaatatctgggaaccatgaagaatgtcatgga
tctgagcatgaaatttgttttcgacattcatgtgttttttatcctatgct
gaatgaatccagtactattttctcttacaaattggctgtagtttacagtt
cactgtacattccatccacaaggaaaagagtgggggacaaaaaccaacat
tgcaatgctacagagctcctgggtattcaggctagaggacacacactccc
caaggtctagcagttgatcgttctcagtgagggactttggattctcattt
tcctacatacctgccctgccctttaaccttctcacttacatacattccca
ctaaaaagaataagtgtcaatacccaaactaaataaaatagttaagtttt
tgatgtgtctttaaggaggaagtatgaagcatagtggaaacttctgtaaa
tgacattatatggttatgtttttttcccaatgatatttgcatacttacac
agctgaacggtgttatgaatgagctctgatatatgccacaggaaagcaca
gtggaatgaatacgaagatcacactggcacaagatgctgcatcacagaat
ggacataggtgcctttaatgagatgacttggggatcattcttttgcctgc
tttaacaagcatccatgcttgctatatgtgtgaacataattctatgtgca
tctcaatgagtcagtacagcttctgttcggtgagtccatccaatcagggt
ctatatctactgctaagattcctgtgtcttcagaattagatatagtaaaa
gaacgtggaaactgctacatgtgctattatctgccaaattgcccttaact
acctttagaatgaggtaagtaagaaaaggtaggttgccatattcctctta
tgccctcatat
gaattcttatttccaatttgcatcaccctgatttgtttcagttgtcttat
tgctctagctagtacttcaagtgctaaattgaatcggcatggtagacagt
ggaaaccctgtcttgttcctgattttaatggaattgctttgagtttctct
ccatttagtttgatgttgagtataggcttgctataaactgcctttattat
gtttaggtatttcctttgtattcctaatttcttcaagacttttataatga
aacagtattgggttcatcaaaggattttttagcatctactgtgatatggt
ttttccttcagtttattcatatggaggattgcatttgctgacttttgtat
gttgaactttccttgcatcatggtggatgctcttttgatgtgttcttggg
ttcagtttgcaagtcttttattaagtatttttgaatctatgttcttgagg
gaaattggtctataattttctttctttgttgagtctttatgtggcttggt
tatcaggatgactgtggcctcatgaaatgagttgggcaatgttccttata
tttctattttgtggaatagtttgggtagtattgatattaactcatctttg
aaatctggtagaattttacacagaaaccatctggtcctattgttgttgtt
gttgttaggagacttttaatgacagcttctatttcagtctatttaaatca
tttgtctgatcttgttttaaagcaggtaagtggtacttattcagaaaatt
atctatttcctttagattttccaattttaaagtatgtccttttgattctt
tggatttccacctttctttctttctttctttctttctttctttctttctt
tctttctttcttttgtgtggttttctgggggtgggtctgacaggatgcag
ggagttaatttggaggtttttctttttgtattgtctactgaggactttct
tggagtatgttggtcaatttttgggagaaggtcttatggagctgtttcga
agaaaggtataattttttttagtggttgagggtggaatggtctaaaaaat
tcttggtagaatcagcttgaatccagggatgtctagggttccgag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_12570940_12572039
seq2: B6Ng01-193N24.b_46_1156 (reverse)

seq1  ATATGAGGGCAT-AGAGG-ATATGGCAACTTACCTTT--CTACTTACCTC  46
      |||||||||||| ||||| |||||||||| |||||||   ||||||||||
seq2  ATATGAGGGCATAAGAGGAATATGGCAACCTACCTTTTCTTACTTACCTC  50

seq1  ATTCTAAA-GTAGTTAGGGGCAA-TTGGCAGAT-ATAGCACATGTTACCA  93
      |||||||| ||||||| |||||| ||||||||| |||||||||| || ||
seq2  ATTCTAAAGGTAGTTAAGGGCAATTTGGCAGATAATAGCACATG-TAGCA  99

seq1  G-TTCCACGTTC-TTTACTATATCTAA-TCTGAAGACACA-GAATCTTAG  139
      | |||||||||| |||||||||||||| |||||||||||| |||||||||
seq2  GTTTCCACGTTCTTTTACTATATCTAATTCTGAAGACACAGGAATCTTAG  149

seq1  CAGTAGATATAAGACCCTGATTGGATGGACTCACCGAACAG-AGCTGTAC  188
      |||||||||| |||||||||||||||||||||||||||||| ||||||||
seq2  CAGTAGATAT-AGACCCTGATTGGATGGACTCACCGAACAGAAGCTGTAC  198

seq1  TGACTCATTGAGATGCACATAGAA-TATGTTCACACATATAGCAAGCATG  237
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TGACTCATTGAGATGCACATAGAATTATGTTCACACATATAGCAAGCATG  248

seq1  GATGCTTGTTAAAGCAGGCAAAAGAATGATCCCCAAGTCATCTCATTAAA  287
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTTGTTAAAGCAGGCAAAAGAATGATCCCCAAGTCATCTCATTAAA  298

seq1  GGCACCTATGTCCATTCTGTGATGCAGCATCTTGTGCCAGTGTGATCTTC  337
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACCTATGTCCATTCTGTGATGCAGCATCTTGTGCCAGTGTGATCTTC  348

seq1  GTATTCATTCCACTGTGCTTTCCTGTGGCATATATCAGAGCTCATTCATA  387
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTCATTCCACTGTGCTTTCCTGTGGCATATATCAGAGCTCATTCATA  398

seq1  ACACCGTTCAGCTGTGTAAGTATGCAAATATCATTGGGAAAAAAACATAA  437
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCGTTCAGCTGTGTAAGTATGCAAATATCATTGGGAAAAAAACATAA  448

seq1  CCATATAATGTCATTTACAGAAGTTTCCACTATGCTTCATACTTCCTCCT  487
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATATAATGTCATTTACAGAAGTTTCCACTATGCTTCATACTTCCTCCT  498

seq1  TAAAGACACATCAAAAACTTAACTATTTTATTTAGTTTGGGTATTGACAC  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGACACATCAAAAACTTAACTATTTTATTTAGTTTGGGTATTGACAC  548

seq1  TTATTCTTTTTAGTGGGAATGTATGTAAGTGAGAAGGTTAAAGGGCAGGG  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCTTTTTAGTGGGAATGTATGTAAGTGAGAAGGTTAAAGGGCAGGG  598

seq1  CAGGTATGTAGGAAAATGAGAATCCAAAGTCCCTCACTGAGAACGATCAA  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTATGTAGGAAAATGAGAATCCAAAGTCCCTCACTGAGAACGATCAA  648

seq1  CTGCTAGACCTTGGGGAGTGTGTGTCCTCTAGCCTGAATACCCAGGAGCT  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTAGACCTTGGGGAGTGTGTGTCCTCTAGCCTGAATACCCAGGAGCT  698

seq1  CTGTAGCATTGCAATGTTGGTTTTTGTCCCCCACTCTTTTCCTTGTGGAT  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGCATTGCAATGTTGGTTTTTGTCCCCCACTCTTTTCCTTGTGGAT  748

seq1  GGAATGTACAGTGAACTGTAAACTACAGCCAATTTGTAAGAGAAAATAGT  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGTACAGTGAACTGTAAACTACAGCCAATTTGTAAGAGAAAATAGT  798

seq1  ACTGGATTCATTCAGCATAGGATAAAAAACACATGAATGTCGAAAACAAA  837
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGATTCATTCAGCATAGGATAAAAAACACATGAATGTCGAAAACAAA  848

seq1  TTTCATGCTCAGATCCATGACATTCTTCATGGTTCCCAGATATTCCTGTG  887
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATGCTCAGATCCATGACATTCTTCATGGTTCCCAGATATTCCTGTG  898

seq1  ACATTCCTGAACTCTGGGATATTTTAACTACCTGAGAGGAAAGCTACTGT  937
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCCTGAACTCTGGGATATTTTAACTACCTGAGAGGAAAGCTACTGT  948

seq1  TAGACACATGGGCCATGGCACTGATTACATCAGAACTTTGATGTGTATTT  987
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACACATGGGCCATGGCACTGATTACATCAGAACTTTGATGTGTATTT  998

seq1  AGACGTTTAATGCTCCATAGAACTCCAGAACATTTAGGGAGGTCACTGGT  1037
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACGTTTAATGCTCCATAGAACTCCAGAACATTTAGGGAGGTCACTGGT  1048

seq1  CATCAGGAAATACAACTACCAAACAAATTATCCCTAAACAAATATCTTCT  1087
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGGAAATACAACTACCAAACAAATTATCCCTAAACAAATATCTTCT  1098

seq1  AAAGCAAGAATTC  1100
      |||||||||||||
seq2  AAAGCAAGAATTC  1111