BAC Information

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BAC

Clone NameB6Ng01-194O08
Chromosome4 (Build37)
Map Location 146,739,901 - 146,740,991
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC433791, Rex2, LOC100043012, LOC100041461, LOC630093, OTTMUSG00000010105, LOC666445, MGC117846, OTTMUSG00000010694, LOC626480, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498, LOC100043034, LOC666514, LOC100041561, LOC100041570, OTTMUSG00000010657, LOC384087, LOC666546, LOC666557, LOC545716, LOC666574, LOC666581
Downstream geneEG666588, LOC627701, OTTMUSG00000010671, LOC545718, OTTMUSG00000010673, 2610305D13Rik, LOC666618, LOC100043100, LOC666640, LOC194189, LOC666652, LOC100041677, LOC277692, MGC67181, D4Wsu114e, Fv1, Mfn2, Plod1, 2510039O18Rik, Nppb, Nppa, Clcn6, Mthfr, LOC433806, Agtrap, 2610109H07Rik, Mad2l2, Fbxo6, Fbxo44, Fbxo2, Ptchd2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-194O08.bB6Ng01-194O08.g
ACCGA017462GA017463
length1,0981,156
definitionB6Ng01-194O08.b B6Ng01-194O08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttctaatcctccaaggttctgcccagcatgctgtgaaaggatga
ctctaggctaagatatttttataaatagaaaacttactatggattaggac
aaaattaaacagcacctttgaaataattatgattgctcactttcttaaga
aaaatgactccttgtttcatgaaaagcactttgcccatacacattcatgg
tttgttgagtgctgcactgtggagttcttgcaggtgtggtaatgcttaga
ccctgcattcagggtttttttcagcaatctcttgttggagaagttcaaca
gtttggatcctgcgtgtcacaatagttttcttacattcttccttgtttct
cagtgattctgggaaaaggactctctgtgtgttaactgtgtgactgactc
aagagtaaactgaaatcctcagggaaaaagagacattctcatgacatctt
ctctttccttcatgtttatcctttcacctggtgttggcatctttcatttt
tgtcacatgaaaaggtccaggtttttttgaatgattttcccattttcagg
tcttcattttctcagccaaatcttcataaatataaatcaaatctaagagc
cctagatggtaaaggccaaggagacactattgaaggatccaggtgtgtta
gcagctttgaaaaggggtggggtggggctcacctgccagtacaaagagga
catgaatttggttttgccagcttctgtttcattaatgattctgaaagatt
tcactaagaatattagatgtgatgatatggatttcccatggtaggtagtg
ctgtcagctgtcacttcatgtcaatatttaattaattttgatgctgggaa
attgctgttgcccattgaaaatcaagtttcttttacccagactgaaaagc
atcaggttaatgtgtttgaaaaagggccattttacacaggaaagcaaatg
tcagtcttgggatcgcttcccagggccttgtgaccttctttattggaatt
ttagccaagatctctgttaagtctatgttatgctttcctgagagctggcc
tcagctgaacaggaaagccttttgtacccaccagaatagcccttgcca
gaattctcagatgaatactaagatgggattttttgggaaagcacttgtca
cattcatgacatttgtaaggtttctctcctgaatgaattttctgatgaat
tctcagattgcctttttcagtaaagcatttgtcacattcactgcatttgt
aagtttctctcctttatgaattttctgatgccttctcagactgcctttgt
cagtatagcatttctcacattcactacatttgtaaggtttctctcctgta
tgaattttctgatgccttctcagactgcctttgtcagtaaagcatttctc
acattcactacatttgtaaggtttctctcctgtatgaattttctgatgcc
ttctcagattgcgtttatcagtaaagcatttgtcacattcactacatttg
taaggtttctctcctgtatgaatactctgatgattattaagactggattt
ttgtataaagcatttgttacattcactacatttgtaaggtttctctcctg
tatgaattctctgatgatcactaagactgtatttttgtataaagcatttg
tcacattcactacatttgtaaggtttttctcctgtatgaattttctgatg
ccttctcagtttgcgtttttcagtaaagcatttgtcacagtcactacatt
tgtagggtttctctcctttatgaattctcagatgaatactaagatgggat
tttttgggaaagcacttgtcacattcatgatatttgtaagatttctctcc
tgaatgaattttctgatgaattctcagtatgcctttttcagtaaagcatt
tgtcacattcactgcatttgtaaggtttctctcctgtatgaattttcctg
atgaatactaagatgggatctttgggaaaagcatttgtcccattcactac
atttgtgaggtacacatggggggattcaagaataacattgcttagcttgt
tccatttagaagactttctcttgaatattcatgtgttcatggacatgtac
tgggctgtcttcatccaaggcttccacactttgcacattatgaattgatt
tctgaaaaaaggggggaggattgaagtgactgattacctttataggaagt
aaggaattcatatctgtaacctcggatttcggtctctcaagagaagagtt
cctctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_146739901_146740991
seq2: B6Ng01-194O08.b_40_1137

seq1  GAATTCTTCTAATCCTCCAAGGTTCTGCCCAGCATGCTGTGAAAGGATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTAATCCTCCAAGGTTCTGCCCAGCATGCTGTGAAAGGATGA  50

seq1  CTCTAGGCTAAGATATTTTTATAAATAGAAAACTTACTATGGATTAGGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGGCTAAGATATTTTTATAAATAGAAAACTTACTATGGATTAGGAC  100

seq1  AAAATTAAACAGCACCTTTGAAATAATTATGATTGCTCACTTTCTTAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTAAACAGCACCTTTGAAATAATTATGATTGCTCACTTTCTTAAGA  150

seq1  AAAATGACTCCTTGTTTCATGAAAAGCACTTTGCCCATACACATTCATGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGACTCCTTGTTTCATGAAAAGCACTTTGCCCATACACATTCATGG  200

seq1  TTTGTTGAGTGCTGCACTGTGGAGTTCTTGCAGGTGTGGTAATGCTTAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTGAGTGCTGCACTGTGGAGTTCTTGCAGGTGTGGTAATGCTTAGA  250

seq1  CCCTGCATTCAGGGTTTTTTTCAGCAATCTCTTGTTGGAGAAGTTCAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCATTCAGGGTTTTTTTCAGCAATCTCTTGTTGGAGAAGTTCAACA  300

seq1  GTTTGGATCCTGCGTGTCACAATAGTTTTCTTACATTCTTCCTTGTTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGATCCTGCGTGTCACAATAGTTTTCTTACATTCTTCCTTGTTTCT  350

seq1  CAGTGATTCTGGGAAAAGGACTCTCTGTGTGTTAACTGTGTGACTGACTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGATTCTGGGAAAAGGACTCTCTGTGTGTTAACTGTGTGACTGACTC  400

seq1  AAGAGTAAACTGAAATCCTCAGGGAAAAAGAGACATTCTCATGACATCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTAAACTGAAATCCTCAGGGAAAAAGAGACATTCTCATGACATCTT  450

seq1  CTCTTTCCTTCATGTTTATCCTTTCACCTGGTGTTGGCATCTTTCATTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTCCTTCATGTTTATCCTTTCACCTGGTGTTGGCATCTTTCATTTT  500

seq1  TGTCACATGAAAAGGTCCAGGTTTTTTTGAATGATTTTCCCATTTTCAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACATGAAAAGGTCCAGGTTTTTTTGAATGATTTTCCCATTTTCAGG  550

seq1  TCTTCATTTTCTCAGCCAAATCTTCATAAATATAAATCAAATCTAAGAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCATTTTCTCAGCCAAATCTTCATAAATATAAATCAAATCTAAGAGC  600

seq1  CCTAGATGGTAAAGGCCAAGGAGACACTATTGAAGGATCCAGGTGTGTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGATGGTAAAGGCCAAGGAGACACTATTGAAGGATCCAGGTGTGTTA  650

seq1  GCAGCTTTGAAAAGGGGTGGGGTGGGGCTCACCTGCCAGTACAAAGAGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTTTGAAAAGGGGTGGGGTGGGGCTCACCTGCCAGTACAAAGAGGA  700

seq1  CATGAATTTGGTTTTGCCAGCTTCTGTTTCATTAATGATTCTGAAAGATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAATTTGGTTTTGCCAGCTTCTGTTTCATTAATGATTCTGAAAGATT  750

seq1  TCACTAAGAATATTAGATGTGATGATATGGATTTCCCATGGTAGGTAGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTAAGAATATTAGATGTGATGATATGGATTTCCCATGGTAGGTAGTG  800

seq1  CTGTCAGCTGTCACTTCATGTCAATATTTAATTAATTTTGATGCTGGGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCAGCTGTCACTTCATGTCAATATTTAATTAATTTTGATGCTGGGAA  850

seq1  ATTGCTGTTGCCCATTGAAATCAAAGTTTCTTTTACCCAGACTGAAAAGC  900
      ||||||||||||||||||||   |||||||||||||||||||||||||||
seq2  ATTGCTGTTGCCCATTGAAAATCAAGTTTCTTTTACCCAGACTGAAAAGC  900

seq1  ATCA-GTTAATGTGTTTG-AAAAGGGCCA-TTTACACAGG-AAGCAAATG  946
      |||| ||||||||||||| |||||||||| |||||||||| |||||||||
seq2  ATCAGGTTAATGTGTTTGAAAAAGGGCCATTTTACACAGGAAAGCAAATG  950

seq1  TCAGTCTTGGATTCGC-TCCCAGGGCC-TGTGACCTTCTTTATTGG-ATT  993
      ||||||||||  |||| |||||||||| |||||||||||||||||| |||
seq2  TCAGTCTTGGGATCGCTTCCCAGGGCCTTGTGACCTTCTTTATTGGAATT  1000

seq1  TTAGCCAGAATCTCTGTTTAGTCTATG-TATGCTTTTCCTGAGGAGCTGG  1042
      |||||||  ||||||||| |||||||| ||||| |||||||| |||||||
seq2  TTAGCCAAGATCTCTGTTAAGTCTATGTTATGC-TTTCCTGA-GAGCTGG  1048

seq1  CCTCAGCTTGAACAGGAAAGCCTTTTGTTACCCA-CAG-ATAG-CCTTGC  1089
      ||||||| ||||||||||||||||||| |||||| ||| |||| ||||||
seq2  CCTCAGC-TGAACAGGAAAGCCTTTTG-TACCCACCAGAATAGCCCTTGC  1096

seq1  CA  1091
      ||
seq2  CA  1098