BAC Information

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BAC

Clone NameB6Ng01-196A19
Chromosome4 (Build37)
Map Location 10,049,009 - 10,182,657
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100039584, 4933402J24Rik, Asph, Gdf6, 4930448K20Rik
Downstream geneLOC666840, 1700123O12Rik, LOC383991, LOC100039656, LOC545589, 2610301B20Rik, LOC383992, LOC100039746, Plekhf2, 2310030N02Rik, LOC546828, LOC666897, Trp53inp1, Ccne2, Ints8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-196A19.bB6Ng01-196A19.g
ACCGA018298GA018299
length717690
definitionB6Ng01-196A19.b B6Ng01-196A19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(10,049,009 - 10,049,724)(10,181,968 - 10,182,657)
sequence
gaattccaaaccaaaatatataagttactcatcagtcaataaataagtat
aatattcaaaaagaaaacccagatcacccaattaaacaagagcaaacggc
aaaatacttttctgaaaggatataaagataggcaacatatttattgaaat
gccctcaggatcactcatcattggggaaacagcaatcaaatccatgcaga
agggaattgggaaatgtatccctctgcttggtaaatactgaaaggaaatg
atattggaactacatgaaggcagttgtgcctcagtgttcattgttcattg
actctccactcattgagctgtggaagaatctgagtgtccttcagtgagtc
aatgcataaagaatccttgacactatacataatagaatactctccagcct
tttagcagagtcatttatcatggccatgtataatagtgcagaggaaacaa
taggacattgtattaaattttactctacaatttatttccctattaaacat
tcaacccttagatttcccctaattcttgttgcattgtccatttttatatt
tcataggtggagggcaaattaaaacacacagagaaatcagtgatgggttt
tgaaatcaacgtactgttattgcaggaagtttaggtaaatggtgacaggt
aaacaaaaatgccaggggaaagccctcaaatttaaggtcatatgcaattt
aaataaaaagcatgttt
gaattcatagatgtggagttgatagtaggtgggtctctgtatgacgggct
tccatgtcaggttccaggtatgtgctctgtgtggaaaggcacatgaagct
cttatttactaattctgtggctttatgcaggtcacttcaccttcctgggt
cccagtttcatctttagtaagataaacatggtgataaaatctgctttata
aaatcatcgatgctgcttgaacaagtaactatgtttaaagttttcagtag
tgctttactcgagaccatgttccataagaggaacaactggtgagaatggc
aaatactattacaaaagtgagtctatttttctacacacacaacactgatt
ttctgctattttgggactaatggaggcatggatgctaaatacaacctctt
ccctactaagcctacaattggcctttcataaccttccgaggtcctttcaa
aactgggtgcacatctattttatgtgtctctatggagtcatgctcttgcc
atagcaatgtggctcaggaaagggaagtttctgtctgtttatttgtctct
actttatttgtctccacggtctcttctgcctcagggatcggatcgtattt
gtctgtatttcctgagaatttcacatggtgcctgacataatatttaatac
atatatgttaagtggcagggaaggagggaaggagggggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_10049009_10049724
seq2: B6Ng01-196A19.b_51_767

seq1  GAATTCCAAACCAAAATATATAAGTTACTCATCAGTCAATAAATAAGTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAACCAAAATATATAAGTTACTCATCAGTCAATAAATAAGTAT  50

seq1  AATATTCAAAAAGAAAACCCAGATCACCCAATTAAACAAGAGCAAACGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTCAAAAAGAAAACCCAGATCACCCAATTAAACAAGAGCAAACGGC  100

seq1  AAAATACTTTTCTGAAAGGATATAAAGATAGGCAACATATTTATTGAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATACTTTTCTGAAAGGATATAAAGATAGGCAACATATTTATTGAAAT  150

seq1  GCCCTCAGGATCACTCATCATTGGGGAAACAGCAATCAAATCCATGCAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTCAGGATCACTCATCATTGGGGAAACAGCAATCAAATCCATGCAGA  200

seq1  AGGGAATTGGGAAATGTATCCCTCTGCTTGGTAAATACTGAAAGGAAATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAATTGGGAAATGTATCCCTCTGCTTGGTAAATACTGAAAGGAAATG  250

seq1  ATATTGGAACTACATGAAGGCAGTTGTGCCTCAGTGTTCATTGTTCATTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGGAACTACATGAAGGCAGTTGTGCCTCAGTGTTCATTGTTCATTG  300

seq1  ACTCTCCACTCATTGAGCTGTGGAAGAATCTGAGTGTCCTTCAGTGAGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCCACTCATTGAGCTGTGGAAGAATCTGAGTGTCCTTCAGTGAGTC  350

seq1  AATGCATAAAGAATCCTTGACACTATACATAATAGAATACTCTCCAGCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCATAAAGAATCCTTGACACTATACATAATAGAATACTCTCCAGCCT  400

seq1  TTTAGCAGAGTCATTTATCATGGCCATGTATAATAGTGCAGAGGAAACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCAGAGTCATTTATCATGGCCATGTATAATAGTGCAGAGGAAACAA  450

seq1  TAGGACATTGTATTAAATTTTACTCTACAATTTATTTCCCTATTAAACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGACATTGTATTAAATTTTACTCTACAATTTATTTCCCTATTAAACAT  500

seq1  TCAACCCTTAGATTTCCCCTAATTCTTGTTGCATTGTCCATTTTTATATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACCCTTAGATTTCCCCTAATTCTTGTTGCATTGTCCATTTTTATATT  550

seq1  TCATAGGTGGAGGGCAAATTAAAACACACAGAGAAATCAGTGATGGGTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGGTGGAGGGCAAATTAAAACACACAGAGAAATCAGTGATGGGTTT  600

seq1  TGAAATCAACGTACTGTTATTGCAGGAAGTTTAGGTAAATGGTGACAGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATCAACGTACTGTTATTGCAGGAAGTTTAGGTAAATGGTGACAGGT  650

seq1  AAACAAAAATGCCA-GGGAAAGCCCTCAAATTTTAAGGTCATATGC-ATT  698
      |||||||||||||| ||||||||||||||| ||||||||||||||| |||
seq2  AAACAAAAATGCCAGGGGAAAGCCCTCAAA-TTTAAGGTCATATGCAATT  699

seq1  TAAATAAAAAGCATGTTT  716
      ||||||||||||||||||
seq2  TAAATAAAAAGCATGTTT  717

seq1: chr4_10181968_10182657
seq2: B6Ng01-196A19.g_63_752 (reverse)

seq1  TTCCCCCTCCTTCCCTCCTTCCCTGCCACTTAACATATATGTATTAAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCCTCCTTCCCTCCTTCCCTGCCACTTAACATATATGTATTAAATA  50

seq1  TTATGTCAGGCACCATGTGAAATTCTCAGGAAATACAGACAAATACGATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTCAGGCACCATGTGAAATTCTCAGGAAATACAGACAAATACGATC  100

seq1  CGATCCCTGAGGCAGAAGAGACCGTGGAGACAAATAAAGTAGAGACAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATCCCTGAGGCAGAAGAGACCGTGGAGACAAATAAAGTAGAGACAAAT  150

seq1  AAACAGACAGAAACTTCCCTTTCCTGAGCCACATTGCTATGGCAAGAGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGACAGAAACTTCCCTTTCCTGAGCCACATTGCTATGGCAAGAGCA  200

seq1  TGACTCCATAGAGACACATAAAATAGATGTGCACCCAGTTTTGAAAGGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCCATAGAGACACATAAAATAGATGTGCACCCAGTTTTGAAAGGAC  250

seq1  CTCGGAAGGTTATGAAAGGCCAATTGTAGGCTTAGTAGGGAAGAGGTTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGGAAGGTTATGAAAGGCCAATTGTAGGCTTAGTAGGGAAGAGGTTGT  300

seq1  ATTTAGCATCCATGCCTCCATTAGTCCCAAAATAGCAGAAAATCAGTGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGCATCCATGCCTCCATTAGTCCCAAAATAGCAGAAAATCAGTGTT  350

seq1  GTGTGTGTAGAAAAATAGACTCACTTTTGTAATAGTATTTGCCATTCTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTAGAAAAATAGACTCACTTTTGTAATAGTATTTGCCATTCTCA  400

seq1  CCAGTTGTTCCTCTTATGGAACATGGTCTCGAGTAAAGCACTACTGAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTGTTCCTCTTATGGAACATGGTCTCGAGTAAAGCACTACTGAAAA  450

seq1  CTTTAAACATAGTTACTTGTTCAAGCAGCATCGATGATTTTATAAAGCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAAACATAGTTACTTGTTCAAGCAGCATCGATGATTTTATAAAGCAG  500

seq1  ATTTTATCACCATGTTTATCTTACTAAAGATGAAACTGGGACCCAGGAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATCACCATGTTTATCTTACTAAAGATGAAACTGGGACCCAGGAAG  550

seq1  GTGAAGTGACCTGCATAAAGCCACAGAATTAGTAAATAAGAGCTTCATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGTGACCTGCATAAAGCCACAGAATTAGTAAATAAGAGCTTCATGT  600

seq1  GCCTTTCCACACAGAGCACATACCTGGAACCTGACATGGAAGCCCGTCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTCCACACAGAGCACATACCTGGAACCTGACATGGAAGCCCGTCAT  650

seq1  ACAGAGACCCACCTACTATCAACTCCACATCTATGAATTC  690
      ||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGACCCACCTACTATCAACTCCACATCTATGAATTC  690