BAC Information

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BAC

Clone NameB6Ng01-198I24
Chromosome4 (Build37)
Map Location 103,557,041 - 103,558,132
singlet/doubletsinglet
Overlap genenone
Upstream geneSgip1, Tctex1d1, Insl5, Wdr78, Mier1, Slc35d1, 4921539E11Rik, 4930456L15Rik, Oma1, LOC665451, LOC100039940, EG665460
Downstream geneLOC622315, Dab1, C8b, C8a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-198I24.b
ACCGA020126
length1,095
definitionB6Ng01-198I24.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatggtgtagagacagataataaagtacagaagggactgtagca
tctttacctacccgtgactatgaatgaggttagattcttgctgacaaagt
ttgaccaaaagacacaagaggcacaaaagcacttgcaacacaccaggggg
attagtcttctcctaagaggaagtcaatgcaaatgaaggcaatgtgttaa
tgcccagctaggcaatgtgacgtatagttattactcttttgggaagatct
agactagagatagtatagaatttagttagacaaagaatccaactaggact
gttcaatcagaaaaaccttgtgtctgctgaacacttttgttaatggacat
gatcataaatattatgaagaaaaagaaatcaatccagtgaatggggaaat
aacaggtatgcagtcagagggcagaaagcagttcatgtgtcaaagggtgt
ttgggaaactttgtgattagacttatattcctggacagggttacccagaa
taaaaatgtaatcagaagggactgtcccagggtgaaggacaaagaaacag
acatgcacagatagaagacaaaagatagtgacaatttacaggcccaaacc
tggggcagttccttctctcctgggtcttaaaagaaaccaacactgccatc
ttctccatgtcacacttctggcttctagaatcatgagggaatgtatgggc
tttgtttcagccacccaggtggtagagctttgggaaaacatacttaggaa
atacatacatattccagacccctttttcatccatagacatcagtatagga
agaggccaaagtgacttgccggtgttggcaaatgtcatactgagatcacc
actcggtcccctgtacttcttcacaaggcatggctttcagttctgctctc
tgctaagtcaccagcctttgcatcagtgcatccttgtccatgagctggtt
cagaaaaggcccagtgaagaagcccagtgccatcatccaggcaaaaaagg
agtcaacactacagggttagctgggatgttaggtgtgaaagaagggagag
agtcaagcagatctaaggtgaaagcaggaataaactctttcatta
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_103557041_103558132
seq2: B6Ng01-198I24.b_46_1140 (reverse)

seq1  TAATG-AAGAGTTTTATTCCTGCTTTCACCCTAGAATCTGGCTTGACTCC  49
      ||||| ||||| |||||||||||||||||| ||| |||| |||||||| |
seq2  TAATGAAAGAG-TTTATTCCTGCTTTCACCTTAG-ATCT-GCTTGACT-C  46

seq1  TCT-CCTTCTTTCACACCTAACAT-CCAGCTAACCCTGTAGTGTTGACTC  97
      ||| |||||||||||||||||||| |||||||||||||||||||||||||
seq2  TCTCCCTTCTTTCACACCTAACATCCCAGCTAACCCTGTAGTGTTGACTC  96

seq1  --TTTTTGCCTGGATGATGGCACTGGGCTTCTTCACTGG--CCTTTCTGA  143
        |||||||||||||||||||||||||||||||||||||  | |||||||
seq2  CTTTTTTGCCTGGATGATGGCACTGGGCTTCTTCACTGGGCCTTTTCTGA  146

seq1  ACCAGCTCATGGACAAGGATGCACTGATGCAAAGGCTGGTGACTTAGCAG  193
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGCTCATGGACAAGGATGCACTGATGCAAAGGCTGGTGACTTAGCAG  196

seq1  AGAGCAGAACTGAAAGCCATGCCTTGTGAAGAAGTACAGGGGACCGAGTG  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAGAACTGAAAGCCATGCCTTGTGAAGAAGTACAGGGGACCGAGTG  246

seq1  GTGATCTCAGTATGACATTTGCCAACACCGGCAAGTCACTTTGGCCTCTT  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATCTCAGTATGACATTTGCCAACACCGGCAAGTCACTTTGGCCTCTT  296

seq1  CCTATACTGATGTCTATGGATGAAAAAGGGGTCTGGAATATGTATGTATT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATACTGATGTCTATGGATGAAAAAGGGGTCTGGAATATGTATGTATT  346

seq1  TCCTAAGTATGTTTTCCCAAAGCTCTACCACCTGGGTGGCTGAAACAAAG  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAAGTATGTTTTCCCAAAGCTCTACCACCTGGGTGGCTGAAACAAAG  396

seq1  CCCATACATTCCCTCATGATTCTAGAAGCCAGAAGTGTGACATGGAGAAG  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATACATTCCCTCATGATTCTAGAAGCCAGAAGTGTGACATGGAGAAG  446

seq1  ATGGCAGTGTTGGTTTCTTTTAAGACCCAGGAGAGAAGGAACTGCCCCAG  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCAGTGTTGGTTTCTTTTAAGACCCAGGAGAGAAGGAACTGCCCCAG  496

seq1  GTTTGGGCCTGTAAATTGTCACTATCTTTTGTCTTCTATCTGTGCATGTC  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGGCCTGTAAATTGTCACTATCTTTTGTCTTCTATCTGTGCATGTC  546

seq1  TGTTTCTTTGTCCTTCACCCTGGGACAGTCCCTTCTGATTACATTTTTAT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCTTTGTCCTTCACCCTGGGACAGTCCCTTCTGATTACATTTTTAT  596

seq1  TCTGGGTAACCCTGTCCAGGAATATAAGTCTAATCACAAAGTTTCCCAAA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGTAACCCTGTCCAGGAATATAAGTCTAATCACAAAGTTTCCCAAA  646

seq1  CACCCTTTGACACATGAACTGCTTTCTGCCCTCTGACTGCATACCTGTTA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCTTTGACACATGAACTGCTTTCTGCCCTCTGACTGCATACCTGTTA  696

seq1  TTTCCCCATTCACTGGATTGATTTCTTTTTCTTCATAATATTTATGATCA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCCATTCACTGGATTGATTTCTTTTTCTTCATAATATTTATGATCA  746

seq1  TGTCCATTAACAAAAGTGTTCAGCAGACACAAGGTTTTTCTGATTGAACA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCATTAACAAAAGTGTTCAGCAGACACAAGGTTTTTCTGATTGAACA  796

seq1  GTCCTAGTTGGATTCTTTGTCTAACTAAATTCTATACTATCTCTAGTCTA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTAGTTGGATTCTTTGTCTAACTAAATTCTATACTATCTCTAGTCTA  846

seq1  GATCTTCCCAAAAGAGTAATAACTATACGTCACATTGCCTAGCTGGGCAT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTCCCAAAAGAGTAATAACTATACGTCACATTGCCTAGCTGGGCAT  896

seq1  TAACACATTGCCTTCATTTGCATTGACTTCCTCTTAGGAGAAGACTAATC  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACATTGCCTTCATTTGCATTGACTTCCTCTTAGGAGAAGACTAATC  946

seq1  CCCCTGGTGTGTTGCAAGTGCTTTTGTGCCTCTTGTGTCTTTTGGTCAAA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGGTGTGTTGCAAGTGCTTTTGTGCCTCTTGTGTCTTTTGGTCAAA  996

seq1  CTTTGTCAGCAAGAATCTAACCTCATTCATAGTCACGGGTAGGTAAAGAT  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTCAGCAAGAATCTAACCTCATTCATAGTCACGGGTAGGTAAAGAT  1046

seq1  GCTACAGTCCCTTCTGTACTTTATTATCTGTCTCTACACCATGGAATTC  1092
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACAGTCCCTTCTGTACTTTATTATCTGTCTCTACACCATGGAATTC  1095