BAC Information

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BAC

Clone NameB6Ng01-198P08
Chromosome4 (Build37)
Map Location 144,287,520 - 144,288,307
singlet/doubletsinglet
Overlap genenone
Upstream geneOTTMUSG00000010333, LOC277666, OTTMUSG00000010009, OTTMUSG00000010328, OTTMUSG00000010433, LOC195555, LOC194224, LOC626889, LOC329984, LOC626922, LOC626943, LOC100041127, LOC436146, Pramel4, LOC100041077, LOC100041144, Oog3, Oog2, C87977, Pramel5, LOC666150, LOC626995, OTTMUSG00000010537, EG627009, Pramef12, D530049N12Rik, 1700012P22Rik, Aadacl3, 9430007A20Rik, LOC100041232, LOC666194, LOC627085, LOC666215, LOC435815, Gm436
Downstream geneLOC546849, Gm438, LOC666242, LOC676844, Dhrs3, Vps13d, Tnfrsf1b, Tnfrsf8, LOC666282, 9230115A19Rik, LOC195576, LOC622846, LOC666314, LOC545701, OTTMUSG00000010965, LOC666334, LOC545703, LOC384081, LOC100041379, LOC666349
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-198P08.bB6Ng01-198P08.g
ACCGA020415GA020416
length7951,074
definitionB6Ng01-198P08.b B6Ng01-198P08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacagatgagccatggcagagagaatataaggttattgacactgc
acttttatggagaattgcttagccaaacctaatttgagcctaaaggacac
atcttgacatgaagaattctgttgtcaactctatatattatatgtaatct
ctatagaatgtgcatatgtgtgtgtattcatgcaataacaattagtaaaa
aagagtccacgaatttaaagaagaatggggatatataggagagtttggag
ggaggaaaagaagaaatgtaattaaattatagtctcaaaacattttaaaa
gaaaagaaatgaaaaaggaaagaggaaggctacagaattttgtctgtaac
attgtattcttatgtgctttgctagagtgttcaaaagttccaaaagtttt
cctggtggagtcttttgggtttcttaaacagagaatcatatcacctacaa
agaagaaggatggcttcttcctttaccacttgtgtccctattattttctt
cctttatcttattgctttagaattaccattaagctatgggtgctcaatgg
ttcacctgtgtttctttcaagcattcactactcatcaacctctgcatttc
tctgtacctcagatagctgatatcaacctgtgtctgtgttctcattttta
caaatggatctggatttttttttttcttttggatcattctaacaaccctg
ttcaatgtcctggcctaggagtcaaattgggtatcattgtcaattggggt
tgagtggtctaagacattttggtgaatttttgtggaagtgggcta
gaattctcacccgaggtaataccgaaaggctgagaaacacctgaaaaaat
gttcaacatccttaatcatcaaagaaatgcaaatcaaaacaaccctgaga
ttccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacag
cagatgctggcgaggatgtggagaaagaggaacactcctccattgttggt
gggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctc
agaaaattggacatagtactaccggaggatccagcaatacctctcctggg
catagatccagaagatgtcccaaccggtaagaaggacacatgctccacta
tgttcatagcagccttatttataatagccagaagctggaaaggacccaga
tgtccctcaacagaggaatggatacaaaaaatgtggtacatttacacaat
ggagtactactcagctattaaaaagaatgaatttacgaaattcctaaggc
aaatggttggaatctggagggcatcatcctgagtgaggtaacccaatcac
aaaagaactcaaatgaaatgtactcactgataagtggatattaacccaga
aacttagaatagcgagatataaggtacaatatgcaaaacatatgaaactg
aagaagaacgaagaccaaagtgtggacactttgctcattcttagaattgg
aaacaatcacccatggaaggagttacagagacaaagtttggagctgagac
aaaaggatagtccatctagagactgccatatccggggatccatcccataa
tttagcctccaaacgatgacaccattgtatacactagcaagcctttgttg
caaggatggtgatatagctgtcccttgtgagactaggccggggccttagc
aaacacagaagtggatgcctcacagtcaactattgtgatggatcacagac
cccccaatgggagggagcttagagaaaagtatccaaggagctaaagagat
cttgccaacctatcggtggaccaacatatgaacctaaccagtaaccccag
agctcttggacttctatgctgcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_144287520_144288307
seq2: B6Ng01-198P08.b_45_839 (reverse)

seq1  TTGCCCACTTCCACAATAATTCACC-AAATGTCTTAGGCCACTC-ACCCC  48
      | |||||||||||||| |||||||| ||||||||||| |||||| |||||
seq2  TAGCCCACTTCCACAAAAATTCACCAAAATGTCTTAGACCACTCAACCCC  50

seq1  AATTGACAATGATACCCAATTTGACTCCTAGGCCAGGACATTGAACA-GG  97
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AATTGACAATGATACCCAATTTGACTCCTAGGCCAGGACATTGAACAGGG  100

seq1  TTGTTAGAATGATCCAAAAG--AAAAAAAAATCCAGATCCA-TTGTAAAA  144
      ||||||||||||||||||||  ||||||||||||||||||| ||||||||
seq2  TTGTTAGAATGATCCAAAAGAAAAAAAAAAATCCAGATCCATTTGTAAAA  150

seq1  ATGAGAACACAGACACAGGTTGATATCAGCTATCTGAGGTACAGAGAAAT  194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAACACAGACACAGGTTGATATCAGCTATCTGAGGTACAGAGAAAT  200

seq1  GCAGAGGTTGATGAGTAGTGAATGCTTG-AAGAAACACAGGTGAACCATT  243
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GCAGAGGTTGATGAGTAGTGAATGCTTGAAAGAAACACAGGTGAACCATT  250

seq1  GAGCACCCATAGCTTAATGGTAATTCTAAAGCAATAAGATAAAGGAAGAA  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCACCCATAGCTTAATGGTAATTCTAAAGCAATAAGATAAAGGAAGAA  300

seq1  AATAATAGGGACACAAGTGGTAAAGGAAGAAGCCATCCTTCTTCTTTGTA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATAGGGACACAAGTGGTAAAGGAAGAAGCCATCCTTCTTCTTTGTA  350

seq1  GGTGATATGATTCTCTGTTTAAGAAACCCAAAAGACTCCACCAGGAAAAC  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGATATGATTCTCTGTTTAAGAAACCCAAAAGACTCCACCAGGAAAAC  400

seq1  TTTTGGAACTTTTGAACACTCTAGCAAAGCACATAAGAATACAATGTTAC  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGAACTTTTGAACACTCTAGCAAAGCACATAAGAATACAATGTTAC  450

seq1  AGACAAAATTCTGTAGCCTTCCTCTTTCCTTTTTCATTTCTTTTCTTTTA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAAATTCTGTAGCCTTCCTCTTTCCTTTTTCATTTCTTTTCTTTTA  500

seq1  AAATGTTTTGAGACTATAATTTAATTACATTTCTTCTTTTCCTCCCTCCA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTTTTGAGACTATAATTTAATTACATTTCTTCTTTTCCTCCCTCCA  550

seq1  AACTCTCCTATATATCCCCATTCTTCTTTAAATTCGTGGACTCTTTTTTA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTCCTATATATCCCCATTCTTCTTTAAATTCGTGGACTCTTTTTTA  600

seq1  CTAATTGTTATTGCATGAATACACACACATATGCACATTCTATAGAGATT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTGTTATTGCATGAATACACACACATATGCACATTCTATAGAGATT  650

seq1  ACATATAATATATAGAGTTGACAACAGAATTCTTCATGTCAAGATGTGTC  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATAATATATAGAGTTGACAACAGAATTCTTCATGTCAAGATGTGTC  700

seq1  CTTTAGGCTCAAATTAGGTTTGGCTAAGCAATTCTCCATAAAAGTGCAGT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGGCTCAAATTAGGTTTGGCTAAGCAATTCTCCATAAAAGTGCAGT  750

seq1  GTCAATAACCTTATATTCTCTCTGCCATGGCTCATCTGTGAATTC  788
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAATAACCTTATATTCTCTCTGCCATGGCTCATCTGTGAATTC  795