BAC Information

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BAC

Clone NameB6Ng01-199C10
Chromosome4 (Build37)
Map Location 82,544,600 - 82,545,676
singlet/doubletsinglet
Overlap geneFrem1
Upstream geneLOC100040164, EG545641, Nfib, Zdhhc21, Cer1
Downstream geneLOC667985, 1810054D07Rik, Snapc3, Psip1, LOC100040611, 4930473A06Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-199C10.bB6Ng01-199C10.g
ACCGA020561GA020562
length1,106712
definitionB6Ng01-199C10.b B6Ng01-199C10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctcagtatccgaactggagaactccaccctctttcctgcacgct
gaatcccaactttgcacagtgtagaagccagtaggttacaaggagcttgg
ctggagcccgagtggaggaaggatttgacctgtttgggttaaacactaaa
ggttccttatgttccacaggcctttgcacttacggtctacaaacttctcc
aaacctccaagctaagagcacccggctctgcaattacatctggatttcag
caagagacagaatgtctgagtcttatcctaaccttaggtaaaaatttcta
tgaaccgaaactttgataaatgagcagaaatgaagcaagcctgtcatgtt
ttatatccagaaactggaacgactttcttaagccatttttagtgtctata
acactcgagatattattattctatttaaaaagtctgccctaaagctctag
tctacttgaacacctcatttaattctaaagttacacgggtgctcatatga
caggttatatttggcacagctgtattttttagagattatgaaaagaaaaa
ttttaataaacatttcaaaaaggacgttctgacttcctataattaaccct
gggctccagaagggattgttgggagaagcacagcatgcttgaatgctaca
aaaatgtctcactcaactgagttttataaattaataagctaccctctatt
ggagaatctaattagaagagtgtctctgcaaatatttacagattttaaag
gctcaaagtcacatcaaaaatcctttcccagagtgagtctggccttttca
aaaaggtctgttttccagtattacttttctttggtcattcagaaacagtt
catgaaaggtacttccaaagggagtgggcacttttttctctgtattgtca
accatacttcattatacactcctttattcaacatatccttttaaaaagac
ttgtccacatagtaaatagagatgagattattggctacttcaaggcttat
acgaccttgggaagtggttgaaaacccaattagtttagtcaagggaatgg
ccatcatggcataattgtaattggaatgtaaacatgtctcaccgaaggtg
aatggg

gaattcttttccagccttttcctctgaagtagtgcctgtctttgtcactg
aggtgggtttcctatatgcagcaaaatgttggtcctgtttatgtatccag
tctgttagtctatgtctttttattggggaattgagcccattggtattaag
agatattaaagaaaaatgattgttgcttcctgttatttttgttgttagag
gtagaattatgtttttgtggctatcttctttttggtttgttaaaagaaga
ttattttcttgcttcttctagggtgtggtttccctcctgtgttgaagttt
accacttattactccttgattattctgataggtctgcctttatatgtttc
ttgacctttttcccttactgcttttaatattctttctttgtttttttcat
ttggtgttttgattattatgtgatgggaggaatttttttctggtccaatc
tatttcgtgttctctgggcttcttgtatgttcatgggcatctctttcttt
aggttaggcaagttttcttctataattttgttgaagatatttactggtcc
tttaagttgggaatcttccctctcttctatacctattatccttaggtttg
gtcttctccttgtgtccttggatttcctggatgtttgcattttctttgat
tgttgtgtcaatgttttctctggtatcttctctgcctgagattatctctt
ctattttttctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_82544600_82545676
seq2: B6Ng01-199C10.b_45_1150

seq1  GAATTCCTCAGTATCCGAACTGGAGAACTCCACCCTCTTTCCTGCACGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCAGTATCCGAACTGGAGAACTCCACCCTCTTTCCTGCACGCT  50

seq1  GAATCCCAACTTTGCACAGTGTAGAAGCCAGTAGGTTACAAGGAGCTTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCCCAACTTTGCACAGTGTAGAAGCCAGTAGGTTACAAGGAGCTTGG  100

seq1  CTGGAGCCCGAGTGGAGGAAGGATTTGACCTGTTTGGGTTAAACACTAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGCCCGAGTGGAGGAAGGATTTGACCTGTTTGGGTTAAACACTAAA  150

seq1  GGTTCCTTATGTTCCACAGGCCTTTGCACTTACGGTCTACAAACTTCTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCCTTATGTTCCACAGGCCTTTGCACTTACGGTCTACAAACTTCTCC  200

seq1  AAACCTCCAAGCTAAGAGCACCCGGCTCTGCAATTACATCTGGATTTCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTCCAAGCTAAGAGCACCCGGCTCTGCAATTACATCTGGATTTCAG  250

seq1  CAAGAGACAGAATGTCTGAGTCTTATCCTAACCTTAGGTAAAAATTTCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGACAGAATGTCTGAGTCTTATCCTAACCTTAGGTAAAAATTTCTA  300

seq1  TGAACCGAAACTTTGATAAATGAGCAGAAATGAAGCAAGCCTGTCATGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCGAAACTTTGATAAATGAGCAGAAATGAAGCAAGCCTGTCATGTT  350

seq1  TTATATCCAGAAACTGGAACGACTTTCTTAAGCCATTTTTAGTGTCTATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATCCAGAAACTGGAACGACTTTCTTAAGCCATTTTTAGTGTCTATA  400

seq1  ACACTCGAGATATTATTATTCTATTTAAAAAGTCTGCCCTAAAGCTCTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCGAGATATTATTATTCTATTTAAAAAGTCTGCCCTAAAGCTCTAG  450

seq1  TCTACTTGAACACCTCATTTAATTCTAAAGTTACACGGGTGCTCATATGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTTGAACACCTCATTTAATTCTAAAGTTACACGGGTGCTCATATGA  500

seq1  CAGGTTATATTTGGCACAGCTGTATTTTTTAGAGATTATGAAAAGAAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTATATTTGGCACAGCTGTATTTTTTAGAGATTATGAAAAGAAAAA  550

seq1  TTTTAATAAACATTTCAAAAAGGACGTTCTGACTTCCTATAATTAACCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATAAACATTTCAAAAAGGACGTTCTGACTTCCTATAATTAACCCT  600

seq1  GGGCTCCAGAAGGGATTGTTGGGAGAAGCACAGCATGCTTGAATGCTACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTCCAGAAGGGATTGTTGGGAGAAGCACAGCATGCTTGAATGCTACA  650

seq1  AAAATGTCTCACTCAACTGAG-TTTATAAATTAATAAGCTACCCTCTATT  699
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AAAATGTCTCACTCAACTGAGTTTTATAAATTAATAAGCTACCCTCTATT  700

seq1  GGAGAATCTAATTAGAAGAGTGTCTCTGCAAATA-TTACAGA-TTTAAAG  747
      |||||||||||||||||||||||||||||||||| ||||||| |||||||
seq2  GGAGAATCTAATTAGAAGAGTGTCTCTGCAAATATTTACAGATTTTAAAG  750

seq1  GCTCAAAGTCACATC-AAAATCCTTTCCAAGAGTGAGTCTGGCCTTT--C  794
      ||||||||||||||| |||||||||||| ||||||||||||||||||   
seq2  GCTCAAAGTCACATCAAAAATCCTTTCCCAGAGTGAGTCTGGCCTTTTCA  800

seq1  AAAAGGTCTG-TTTCCAGTATTACTTTTCTTTGGTCA-TCAG-AACAGTT  841
      |||||||||| |||||||||||||||||||||||||| |||| |||||||
seq2  AAAAGGTCTGTTTTCCAGTATTACTTTTCTTTGGTCATTCAGAAACAGTT  850

seq1  CATG-AAGGTACTTCC-AAGGGAGT-GGCAC-TTTTCCTCTGTA-TGTCA  886
      |||| ||||||||||| |||||||| ||||| |||| ||||||| |||||
seq2  CATGAAAGGTACTTCCAAAGGGAGTGGGCACTTTTTTCTCTGTATTGTCA  900

seq1  ACCATAC-TCA-TATACACTCC-TTATTCCACATATCC-TTTAAAAAGAC  932
      ||||||| ||| |||||||||| |||||| |||||||| |||||||||||
seq2  ACCATACTTCATTATACACTCCTTTATTCAACATATCCTTTTAAAAAGAC  950

seq1  TTGTCAACATAGTAAATAGAGATGAAGATATT-GCTACTTCAAAGTTTAT  981
      ||||| |||||||||||||||||||   |||| |||||||||| | ||||
seq2  TTGTCCACATAGTAAATAGAGATGAGATTATTGGCTACTTCAAGGCTTAT  1000

seq1  ACGACCTTGGAAGGTG--TGAAAACCCAA-TAG-TTAGTCAA-GGAATGG  1026
      |||||||||| | |||  ||||||||||| ||| |||||||| |||||||
seq2  ACGACCTTGGGAAGTGGTTGAAAACCCAATTAGTTTAGTCAAGGGAATGG  1050

seq1  -CACAATGCCATAATTGT-ATTGGAATGT-AACATGTCTCAC--GAGTGG  1071
       ||  ||| ||||||||| |||||||||| ||||||||||||   ||  |
seq2  CCATCATGGCATAATTGTAATTGGAATGTAAACATGTCTCACCGAAGGTG  1100

seq1  AATGGG  1077
      ||||||
seq2  AATGGG  1106


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