BAC Information

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BAC

Clone NameB6Ng01-199J14
Chromosome4 (Build37)
Map Location 83,148,134 - 83,149,212
singlet/doubletsinglet
Overlap geneLOC100040611
Upstream geneNfib, Zdhhc21, Cer1, Frem1, LOC667985, 1810054D07Rik, Snapc3, Psip1
Downstream gene4930473A06Rik, LOC668010, Bnc2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-199J14.bB6Ng01-199J14.g
ACCGA020891GA020892
length1,109741
definitionB6Ng01-199J14.b B6Ng01-199J14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgccttctcttctctgtcctttccctttgtctccattgtttgct
ttcatactaccttcctgcatgccacttctctgttagtatccatttcagcc
tgtccttgagctgtaagtctctttgtttagatggtgagcctgactctgct
gctgtaccaaaggaggcaggtagaacgtgttccttcctctctatcctaca
ctagaattatgcttcacacacgtaattcctgatagcctatttggttgaca
ttgaccagtccaagtgaagtacaggatacttgctcattgtaagtacctta
ccattcccaccagggcagacagctttcagttactctgactaaaggactga
ggcgatcaacttataaggaggaaaggtttattttggctcttgatttcaga
gattccagtccatgatcacttggtcatcttgtgttggaccagtggaaaca
cagcgtagcatgatgggaaagcatgctgtaggagaactgatcacctcata
gttgccaagaagcaaaaagcaaaaacaaacaaacagagttacagagctaa
gcatagataactgtcatcctagcacttgggatgttaaacagaaggatttc
catgagtttgaggccagataaggggctatatagcaagaccatatctcaaa
acaaggagagagagagagagagagagagagagagagagaattcaatattg
aggacaaggactggcaccatgaccttttcctacccttgggccctgcctct
taaaagttctattgcctcctaatagtgtaatagactggggaccaagtatt
tttgttgttctttgttgttttttggaaacaagatttccctgtacagcctg
gatgtcttggaactaactctgtacaccaggctggcctcgaactcagagat
ccaccttgctcttgcctccctgagtgctggggactaagggcctgtgccac
tgtacccagcaatagtttattaattccttattgcctcagccaagtgttgc
taaggcaagctggcctcagcggggtaagaacaagctttgtttgccgccaa
aacatgtggaaagcttaagtttctaaattcccccagcccacacatgtaaa
gaacttcag

gaattcttaactgaggaaactcgaatggctgagaagcacctaaagaaatg
ttcaacatccttagtcatcagggaaatgcaaatcaaaacgatcctgagat
tacacctcacaccagtcagaatggctaagatcaaaaactcaggtgacagc
agatgctggcaaggatgtggagaaagaagaacactcctccattgctggtg
ggattgcaagctggtacaaccactctggaaagtagtctggcagttccaca
gaaagttggacattgtactctctgaggacccagctatgccactcctaggc
ataaacccagaagatgctccaaagtataacaaggatacatgttccattat
gttcatagcggccatgtttataatagctaggagctggaaacaacccagat
gtccctcaacagaggaacggatacaaaaaatgtggtgcatttacacgatg
gaatactactcagctattaaaaataatgacttcacaaaattcacaggcaa
atgaatggatctagaaaatatcatcctgtgaggtaactcagtaacaaaag
aacacacatggtacgtactcactgattagtgggtattaggcaaagatcgt
gaaatatccacgatacaactcatggaccacatgaagctcaagaggaagga
agaccaaagagtggatgcttcagtcctactaagaagggagaacaatataa
tcaagggaagtacagggtgggaggggtttaggaggaagaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_83148134_83149212
seq2: B6Ng01-199J14.b_44_1152

seq1  GAATTCTGCCTTCTCTTCTCTGTCCTTTCCCTTTGTCTCCATTGTTTGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCCTTCTCTTCTCTGTCCTTTCCCTTTGTCTCCATTGTTTGCT  50

seq1  TTCATACTACCTTCCTGCATGCCACTTCTCTGTTAGTATCCATTTCAGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATACTACCTTCCTGCATGCCACTTCTCTGTTAGTATCCATTTCAGCC  100

seq1  TGTCCTTGAGCTGTAAGTCTCTTTGTTTAGATGGTGAGCCTGACTCTGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTTGAGCTGTAAGTCTCTTTGTTTAGATGGTGAGCCTGACTCTGCT  150

seq1  GCTGTACCAAAGGAGGCAGGTAGAACGTGTTCCTTCCTCTCTATCCTACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTACCAAAGGAGGCAGGTAGAACGTGTTCCTTCCTCTCTATCCTACA  200

seq1  CTAGAATTATGCTTCACACACGTAATTCCTGATAGCCTATTTGGTTGACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAATTATGCTTCACACACGTAATTCCTGATAGCCTATTTGGTTGACA  250

seq1  TTGACCAGTCCAAGTGAAGTACAGGATACTTGCTCATTGTAAGTACCTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACCAGTCCAAGTGAAGTACAGGATACTTGCTCATTGTAAGTACCTTA  300

seq1  CCATTCCCACCAGGGCAGACAGCTTTCAGTTACTCTGACTAAAGGACTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCCCACCAGGGCAGACAGCTTTCAGTTACTCTGACTAAAGGACTGA  350

seq1  GGCGATCAACTTATAAGGAGGAAAGGTTTATTTTGGCTCTTGATTTCAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGATCAACTTATAAGGAGGAAAGGTTTATTTTGGCTCTTGATTTCAGA  400

seq1  GATTCCAGTCCATGATCACTTGGTCATCTTGTGTTGGACCAGTGGAAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCCAGTCCATGATCACTTGGTCATCTTGTGTTGGACCAGTGGAAACA  450

seq1  CAGCGTAGCATGATGGGAAAGCATGCTGTAGGAGAACTGATCACCTCATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCGTAGCATGATGGGAAAGCATGCTGTAGGAGAACTGATCACCTCATA  500

seq1  GTTGCCAAGAAGCAAAAAGCAAAAACAAACAAACAGAGTTACAGAGCTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCCAAGAAGCAAAAAGCAAAAACAAACAAACAGAGTTACAGAGCTAA  550

seq1  GCATAGATAACTGTCATCCTAGCACTTGGGATGTTAAACAGAAGGATTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAGATAACTGTCATCCTAGCACTTGGGATGTTAAACAGAAGGATTTC  600

seq1  CATGAGTTTGAGGCCAGATAAGGGGCTATATAGCAAGACCATATCTCAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGTTTGAGGCCAGATAAGGGGCTATATAGCAAGACCATATCTCAAA  650

seq1  ACAAGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATTCAATATTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATTCAATATTG  700

seq1  AGGACAAGGACTGGCACCATGACCTTTTCCTACCCTTGGGCCCTGCCTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACAAGGACTGGCACCATGACCTTTTCCTACCCTTGGGCCCTGCCTCT  750

seq1  TAAAAGTTCTATTGCCTCCTAATAGTGTAATAGACTGGGGACCAAGTATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGTTCTATTGCCTCCTAATAGTGTAATAGACTGGGGACCAAGTATT  800

seq1  TTTGTTGTTCTTTGTTTGTTTTTTGGAAACAAGATTTCCCTGTACAGCCT  850
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TTTGTTGTTCTTTG-TTGTTTTTTGGAAACAAGATTTCCCTGTACAGCCT  849

seq1  GGATGTCTTGGAACTAACTCTGTACACCAGGCTGGCCTCGAACTCAGAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTCTTGGAACTAACTCTGTACACCAGGCTGGCCTCGAACTCAGAGA  899

seq1  TCCACC-TGC-CTTGCCT-CCTGAGTGCT-GGGACTAAGGGCCTGTGCCA  946
      |||||| ||| ||||||| |||||||||| ||||||||||||||||||||
seq2  TCCACCTTGCTCTTGCCTCCCTGAGTGCTGGGGACTAAGGGCCTGTGCCA  949

seq1  CTGTACCCAGC-ATAG-TTATTA--TTCTTATTGCCTCAG-CAAGTG-TG  990
      ||||||||||| |||| ||||||  | ||||||||||||| |||||| ||
seq2  CTGTACCCAGCAATAGTTTATTAATTCCTTATTGCCTCAGCCAAGTGTTG  999

seq1  CT-AGGC-AGCTGG-CTCAGC-GGGTAAGA--CAGC-TTGTT----GCGC  1029
      || |||| |||||| |||||| ||||||||   ||| |||||    ||  
seq2  CTAAGGCAAGCTGGCCTCAGCGGGGTAAGAACAAGCTTTGTTTGCCGCCA  1049

seq1  AAACA--TGGAAAG-TTGAGTTCC--AAT--CCCCAG--CACACATGTAA  1070
      |||||  ||||||| || |||| |  |||  ||||||  |||||||||||
seq2  AAACATGTGGAAAGCTTAAGTTTCTAAATTCCCCCAGCCCACACATGTAA  1099

seq1  AG-ACTTCAG  1079
      || |||||||
seq2  AGAACTTCAG  1109


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