BAC Information

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BAC

Clone NameB6Ng01-200N19
Chromosome4 (Build37)
Map Location 4,720,394 - 4,720,543
singlet/doubletsinglet
Overlap geneImpad1
Upstream geneRps20, Mos, Plag1, Chchd7, LOC666586, Rdhe2, 4833413O15Rik, Penk1, A830012C17Rik, LOC100039297, LOC622019
Downstream geneLOC100039338, 1700012H17Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-200N19.g
ACCGA021803
length736
definitionB6Ng01-200N19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctaatcttataacaaataacagaaagcaacaattaccgtccctt
attatctcctaatatcaatgtaataaattccccaataaaaaaccatatat
tatcaagtacctgactgagagagatgcagcaaattatttcaaatcaatgg
acttaagttggaaatccctcttgttgatttggagaagtttgaatggaaga
agctgatgaggatgaccccatgaaaacaccacaagtttttactaacccag
acccctaagacctctcagacacgtagccatcatacactaaattatatcac
gtccccaataattatatcccacgggactgcctggcctggccttattgaga
aaagatgcgcctcactctcatgattcttgatgccccaggcagtggagagg
gctgacaggaggggcatgggtggtggaggcatcttcttcgagacatggag
aggactaatgctgtgaggattattcaaacggtactttgggagggggatac
tgccctgaattctaagccacattccagatatgacaccgacgacatcgacg
agtcccaggaccaaaatatggacccgcaccagggaggggcctgtttgggc
agtctccgccccctctccgctccttccctctcctaacccggatatacact
cttgctcccctttcacctcccggccgaccgtttggcctactcgggaaggc
cgatcggccagctgcctggcttgctgcaagggcagg
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_4720394_4720543
seq2: B6Ng01-200N19.g_648_802 (reverse)

seq1  CCTG-CCTTGCAGC-AGCCA-GCAGCTGGCCGATCGGCCTT-CCGCGTAG  46
      |||| ||||||||| ||||| |||||||||||||||||||| ||| ||||
seq2  CCTGCCCTTGCAGCAAGCCAGGCAGCTGGCCGATCGGCCTTCCCGAGTAG  50

seq1  GCC-AACGGTCGGCCGGGAGGTGAAAGGGGAGCAAGAGTGTATATCCGGG  95
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAACGGTCGGCCGGGAGGTGAAAGGGGAGCAAGAGTGTATATCCGGG  100

seq1  TTAGGAGAGGGAAGGAGCGGAGAGGGGGCGGAGACTGCCCAAACAGGCCC  145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGAGAGGGAAGGAGCGGAGAGGGGGCGGAGACTGCCCAAACAGGCCC  150

seq1  CTCCC  150
      |||||
seq2  CTCCC  155