BAC Information

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BAC

Clone NameB6Ng01-200P22
Chromosome4 (Build37)
Map Location 24,149,653 - 24,150,703
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC625462, LOC383998, LOC100040464, LOC623873
Downstream geneLOC664973, F730047E07Rik, Klhl32, 1110007M04Rik, C230012O17Rik, Gpr63, Fhl5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-200P22.bB6Ng01-200P22.g
ACCGA021893GA021894
length7141,068
definitionB6Ng01-200P22.b B6Ng01-200P22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatatagtggattacattgatggattttcatatattaaacc
atccgtgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggagttttgc
atcgatattcataagggaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtactttctacttctatcttgtgaaaaagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactatttataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttttccatttcgtccaggttttcca
gttttgttgagtgtagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgtttgttatgtctcccttttcagtttctgatttttgtt
taattatggatttt

gaattccaatttcttgtggtcaattgatttattagtgtgatagctaaagg
aagaggtacaaatatctatatataatattttcattcctgacaggatagtt
acaagacaggcttaataattcacttttaaagcttagaacaaggaagggag
aacagtatatttatgttctgaatcctagcgagtaacaccttaaccaagtc
atgggaacaccagcaggcaccaatgccaccatattggttggcttgcattt
ctagtacaatataatcaaagagcactttacctcagttacttccttttcaa
aggggtatagctccaatctatccatgagagagtatggaaaaaaacagaat
aggtgaatttataggatatttgaccaggtattaaagttatgaaacacaag
gaaagactaaggacctgttacagcccaaatgcatcttgcgagatcagaca
actacatgtactgaaagaactgtagatggcataagaaacaggtagacatt
gatggggaaaatggaaaaagccaaataaagtctggagttagtagtttatt
attttcagttttttataagtaaaccaaactaatgcaggatagtaactaat
gttagaagggaaaactggatgaaagtaagatgttgtttgcaacttttctg
taagcccaacattattccaaaacataattgttatgaaatatttattagtg
taaagttaaaaaatataattagcaccaactacctttcatccaacttaaga
aaaaattatacatagtcttctatgtgcatctctacagtcttgatatagtt
atttttggaagtaatcattattataaatttgcctacattgtttctctttg
tgtgtatgtatgtgtgcacatgcatggacacggggcatgctggcatataa
tgtgtacttcagtatgttttaatctccttggtaaagtggttttagatttt
catcttataagattgggtaagttcccacctccaataaatttgttccacca
agttatttttacaatgttttaaagtacatggtgagccaaagtctttgtaa
ctcaagaaggttagcagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_24149653_24150703
seq2: B6Ng01-200P22.g_66_1133 (reverse)

seq1  ACTGCTAACCTTCTTGAGTAAC-AAGACTTTGGCTCA-CATGTAC-TTAA  47
      ||||||||||||||||||| || |||||||||||||| ||||||| ||||
seq2  ACTGCTAACCTTCTTGAGTTACAAAGACTTTGGCTCACCATGTACTTTAA  50

seq1  AACATTGTAAAA--TACTT-GTTGAACAAA-TTATTGGA-GTGGG-ACTT  91
      ||||||||||||   |||| || ||||||| |||||||| ||||| ||||
seq2  AACATTGTAAAAATAACTTGGTGGAACAAATTTATTGGAGGTGGGAACTT  100

seq1  A-CCAATCTTAT-AGATG-AAATCTAAAACCACTTTACC-AGGAGA-TAA  136
      | |||||||||| ||||| |||||||||||||||||||| |||||| |||
seq2  ACCCAATCTTATAAGATGAAAATCTAAAACCACTTTACCAAGGAGATTAA  150

seq1  AACATACTGAAGTACACA-TATATGCCAGCATG-CCCGTGTCCATGCATG  184
      |||||||||||||||||| |||||||||||||| ||||||||||||||||
seq2  AACATACTGAAGTACACATTATATGCCAGCATGCCCCGTGTCCATGCATG  200

seq1  TGCACACATACATACACACAAAGAGAAACAATGTAGGCAAATTTATAATA  234
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACACATACATACACACAAAGAGAAACAATGTAGGCAAATTTATAATA  250

seq1  ATGATTACTTCCAAAAATAACTATATCAAGACTGTAGAGATGCACATAGA  284
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTACTTCCAAAAATAACTATATCAAGACTGTAGAGATGCACATAGA  300

seq1  AGACTATGTATAA-TTTTTCTTAAGTTGGATGAAAGGTAGTTGGTGCTAA  333
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  AGACTATGTATAATTTTTTCTTAAGTTGGATGAAAGGTAGTTGGTGCTAA  350

seq1  TTATATTTTTTAACTTTACACTAATAAATATTTCATAACAATTATGTTTT  383
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTTTTTAACTTTACACTAATAAATATTTCATAACAATTATGTTTT  400

seq1  GGAATAATGTTGGGCTTACAGAAAAGTTGCAAACAACATCTTACTTTCAT  433
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATAATGTTGGGCTTACAGAAAAGTTGCAAACAACATCTTACTTTCAT  450

seq1  CCAGTTTTCCCTTCTAACATTAGTTACTATCCTGCATTAGTTTGGTTTAC  483
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTTTCCCTTCTAACATTAGTTACTATCCTGCATTAGTTTGGTTTAC  500

seq1  TTATAAAAAACTGAAAATAATAAACTACTAACTCCAGACTTTATTTGGCT  533
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAAAAACTGAAAATAATAAACTACTAACTCCAGACTTTATTTGGCT  550

seq1  TTTTCCATTTTCCCCATCAATGTCTACCTGTTTCTTATGCCATCTACAGT  583
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCATTTTCCCCATCAATGTCTACCTGTTTCTTATGCCATCTACAGT  600

seq1  TCTTTCAGTACATGTAGTTGTCTGATCTCGCAAGATGCATTTGGGCTGTA  633
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCAGTACATGTAGTTGTCTGATCTCGCAAGATGCATTTGGGCTGTA  650

seq1  ACAGGTCCTTAGTCTTTCCTTGTGTTTCATAACTTTAATACCTGGTCAAA  683
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGTCCTTAGTCTTTCCTTGTGTTTCATAACTTTAATACCTGGTCAAA  700

seq1  TATCCTATAAATTCACCTATTCTGTTTTTTTCCATACTCTCTCATGGATA  733
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTATAAATTCACCTATTCTGTTTTTTTCCATACTCTCTCATGGATA  750

seq1  GATTGGAGCTATACCCCTTTGAAAAGGAAGTAACTGAGGTAAAGTGCTCT  783
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGGAGCTATACCCCTTTGAAAAGGAAGTAACTGAGGTAAAGTGCTCT  800

seq1  TTGATTATATTGTACTAGAAATGCAAGCCAACCAATATGGTGGCATTGGT  833
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTATATTGTACTAGAAATGCAAGCCAACCAATATGGTGGCATTGGT  850

seq1  GCCTGCTGGTGTTCCCATGACTTGGTTAAGGTGTTACTCGCTAGGATTCA  883
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCTGGTGTTCCCATGACTTGGTTAAGGTGTTACTCGCTAGGATTCA  900

seq1  GAACATAAATATACTGTTCTCCCTTCCTTGTTCTAAGCTTTAAAAGTGAA  933
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATAAATATACTGTTCTCCCTTCCTTGTTCTAAGCTTTAAAAGTGAA  950

seq1  TTATTAAGCCTGTCTTGTAACTATCCTGTCAGGAATGAAAATATTATATA  983
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAAGCCTGTCTTGTAACTATCCTGTCAGGAATGAAAATATTATATA  1000

seq1  TAGATATTTGTACCTCTTCCTTTAGCTATCACACTAATAAATCAATTGAC  1033
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATATTTGTACCTCTTCCTTTAGCTATCACACTAATAAATCAATTGAC  1050

seq1  CACAAGAAATTGGAATTC  1051
      ||||||||||||||||||
seq2  CACAAGAAATTGGAATTC  1068


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