BAC Information

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BAC

Clone NameB6Ng01-201M02
Chromosome4 (Build37)
Map Location 18,820,031 - 18,821,020
singlet/doubletsinglet
Overlap geneLOC435772
Upstream geneMmp16, LOC667251
Downstream geneCngb3, LOC623122, Cpne3, LOC100040306, 2410005O16Rik, Wwp1, Slc7a13, Atp6v0d2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-201M02.bB6Ng01-201M02.g
ACCGA022437GA022438
length9921,119
definitionB6Ng01-201M02.b B6Ng01-201M02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattagaggcatgaaaattcctctgagtttgagttttcctcatca
actaccagcatggtaaaatatctctaaagatacaatactggctttgacaa
taccagcatctctctaagtgcacttaaggtctattcaaaagcaaggaatg
tagtcctggtactgaaaatctagctatttacccagggctagagagaacaa
ggtcttataggagaactttattactgccatagccagcatatcttaaggca
aaaggcaagcctattataatcagaaatagaagttttgtgcacttgtacca
atgggagttttgtgagtgggggtccctgactcactgtgtttccttgggtc
agttttcttcctactgtgatgccttaaccagacttgatagcggggtttgt
gtccaacttcgtatgtcacgattgtttgctatccctaggaaccctgatct
tttctgaaggggaacaaagaaggagtagatatggggaacaggataggagg
atacaggtaacttggtggagtggagggaagggagtctgcagtcagaatgt
attttatgagagaagaataaagaaaacataattatagttaagaaagtgtt
ctatcagagcccctacaaccacacaacatatttaacagctgcacacaagc
ttaaagaatggcatgtcaagttaaatatcctaagttaatgttagcaattt
agtgaaattacttaatttctcactttcttacaatcaaaatttttaaaaat
tatttttgtatgaaattgttgtcattaaatataggaaacagttttttcat
taaaaaataaatttctacttcagttaattccttttccgttttatgattac
agcactacctggaacacaaaacacaggggaaaaattaaagaaatataaat
tggcacaattgaagtcaaataatctctattttcagatgatatgtttttat
atagactcaagaatccctgagaaaacttctagaaattatcga

gaattccctatttagctctgaggcccatattttaatgggttatttgattt
tctggagtccaccttcttgagttctttatatatattggatattagtcccc
tatctaatttaggataggcaaaaatcctttcccaatctgttggtggtctt
tttgtcttactgacggtgtcttttgccttacagaagctttgcaattttat
gaggtcctatttgtagattctcgatcttacagcacaagccattgctgttc
tattcaggaatttttcccctgtgcccatatcttcgaggcttttccccact
ttctcctctataattttcagtgtctctggtattatgtggagttccttgat
cctcttagatttgagcttagtacaaggagataggaatgaatcaattcgca
ttcctctacatgataaccggcagttgtgctagcaccatttgttgaaaatg
ctgttttttttttccagtggatggttttagcacccttgtcaaagataaag
tgaccataggtgtgtgggttcatttctgggtcttcaattctattccattg
gtctacttgtctatagctataccagtaccattcagtttttatcatgattg
ctctatatacagctttaggtcaggcatggtgattccaccagatgttcttt
tatcattgagaagagttttttgctatcctagatttttgttcttccaaatg
aatttacaaattgcccattctaatttcttgaagaattgagttggaatttt
gatggggattgcatagaatctgcagattgcttttggcaagatagccattt
ttactatattgatcctgccaacccatgaacatgggtgatctttccatctt
ctgagatcttctttaatttctttcatcagagacttggaagttctcattat
aaggatcttttacttccttagttagagtcatgcaaggtatttttatatat
ttgtgagtattcagatggtgtgtttcctaatttctctctcagctgtttat
cctttgtgtagagaagaccattgactgtttgagtatttaattccagctac
ttcctgagctgttatcagggtagagtctcttgtggaatttttaggttatt
aatggtgacatcatcggta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_18820031_18821020
seq2: B6Ng01-201M02.b_42_1033

seq1  GAATTCATTAGAGGCATGAAAATTCCTCTGAGTTTGAGTTTTCCTCATCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTAGAGGCATGAAAATTCCTCTGAGTTTGAGTTTTCCTCATCA  50

seq1  ACTACCAGCATGGTAAAATATCTCTAAAGATACAATACTGGCTTTGACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACCAGCATGGTAAAATATCTCTAAAGATACAATACTGGCTTTGACAA  100

seq1  TACCAGCATCTCTCTAAGTGCACTTAAGGTCTATTCAAAAGCAAGGAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAGCATCTCTCTAAGTGCACTTAAGGTCTATTCAAAAGCAAGGAATG  150

seq1  TAGTCCTGGTACTGAAAATCTAGCTATTTACCCAGGGCTAGAGAGAACAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCCTGGTACTGAAAATCTAGCTATTTACCCAGGGCTAGAGAGAACAA  200

seq1  GGTCTTATAGGAGAACTTTATTACTGCCATAGCCAGCATATCTTAAGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTTATAGGAGAACTTTATTACTGCCATAGCCAGCATATCTTAAGGCA  250

seq1  AAAGGCAAGCCTATTATAATCAGAAATAGAAGTTTTGTGCACTTGTACCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCAAGCCTATTATAATCAGAAATAGAAGTTTTGTGCACTTGTACCA  300

seq1  ATGGGAGTTTTGTGAGTGGGGGTCCCTGACTCACTGTGTTTCCTTGGGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGAGTTTTGTGAGTGGGGGTCCCTGACTCACTGTGTTTCCTTGGGTC  350

seq1  AGTTTTCTTCCTACTGTGATGCCTTAACCAGACTTGATAGCGGGGTTTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTCTTCCTACTGTGATGCCTTAACCAGACTTGATAGCGGGGTTTGT  400

seq1  GTCCAACTTCGTATGTCACGATTGTTTGCTATCCCTAGGAACCCTGATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAACTTCGTATGTCACGATTGTTTGCTATCCCTAGGAACCCTGATCT  450

seq1  TTTCTGAAGGGGAACAAAGAAGGAGTAGATATGGGGAACAGGATAGGAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGAAGGGGAACAAAGAAGGAGTAGATATGGGGAACAGGATAGGAGG  500

seq1  ATACAGGTAACTTGGTGGAGTGGAGGGAAGGGAGTCTGCAGTCAGAATGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGGTAACTTGGTGGAGTGGAGGGAAGGGAGTCTGCAGTCAGAATGT  550

seq1  ATTTTATGAGAGAAGAATAAAGAAAACATAATTATAGTTAAGAAAGTGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATGAGAGAAGAATAAAGAAAACATAATTATAGTTAAGAAAGTGTT  600

seq1  CTATCAGAGCCCCTACAACCACACAACATA-TTAACAGCTGCACACAAGC  649
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CTATCAGAGCCCCTACAACCACACAACATATTTAACAGCTGCACACAAGC  650

seq1  TTAAAGAATGGCATGTCAAGTTAAATATCCTAAGTTAATGTTAGCAATTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGAATGGCATGTCAAGTTAAATATCCTAAGTTAATGTTAGCAATTT  700

seq1  AGTG-AATTACTTAATTTCTCACTTTCTTACAATCAAAA-TTTTAAAAAT  747
      |||| |||||||||||||||||||||||||||||||||| ||||||||||
seq2  AGTGAAATTACTTAATTTCTCACTTTCTTACAATCAAAATTTTTAAAAAT  750

seq1  TA-TTTTGTATGAAATTGTTGTCATTAAATATAGGAAACAGTTTTTTCAT  796
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTGTATGAAATTGTTGTCATTAAATATAGGAAACAGTTTTTTCAT  800

seq1  TAAAAAATAAATTTCTACTTCAGTTAATTCCTTTTCCGTTTTATGATTAC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAATAAATTTCTACTTCAGTTAATTCCTTTTCCGTTTTATGATTAC  850

seq1  AGCACTACCTGGAACACAAAACACA-GGGAAAAAATAAAGAAATATAAAT  895
      ||||||||||||||||||||||||| |||||||| |||||||||||||||
seq2  AGCACTACCTGGAACACAAAACACAGGGGAAAAATTAAAGAAATATAAAT  900

seq1  TGGCACAATGGAAGTCAAAATATCTCTATTTTCAGATGATATGTTTTTAT  945
      ||||||||| |||||||||  |||||||||||||||||||||||||||||
seq2  TGGCACAATTGAAGTCAAATAATCTCTATTTTCAGATGATATGTTTTTAT  950

seq1  AATAAGAACTCAAAAATTCCTGAGAAAACTTCTAGAAATTATCAA  990
       |||   |||||| ||| ||||||||||||||||||||||||| |
seq2  -ATA--GACTCAAGAATCCCTGAGAAAACTTCTAGAAATTATCGA  992


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