BAC Information

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BAC

Clone NameB6Ng01-201O15
Chromosome4 (Build37)
Map Location 59,793,673 - 59,794,816
singlet/doubletsinglet
Overlap gene1110054O05Rik
Upstream geneOlfr267, AI314180, LOC100041581, Ltb4dh, 2010203O07Rik, Gng10, AI481877, LOC433712, Ugcg, LOC100041535, LOC634731, LOC666719, Rod1, Hsdl2, E130308A19Rik, LOC100041592
Downstream geneSnx30, Slc46a2, LOC100041656, Mup4, LOC620807, LOC100041658, LOC620846, Mup2, LOC620882, LOC100041687, LOC667221, LOC100038948, LOC620997, Mup1, LOC620942, LOC100039008, LOC100039028, LOC620982, LOC100039054, LOC100039063
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-201O15.bB6Ng01-201O15.g
ACCGA022555GA022556
length1,1211,022
definitionB6Ng01-201O15.b B6Ng01-201O15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctaacggcaatgaaagtcaaatgacttaaccaactagttactct
ttaggttttggatgcttcatagtagatctgactatgagccaacaaaaagc
tacactaacaggggttgttcctactgtaattgcagagagaaaagttagaa
tgagataatttatatgtttttattgtgtggctttttttagtatttttttt
ttctttcctaaatggatttctcatagttttcattgtggttcagtttgggc
agaggttggggggtactgaggatcaaatacaaattactttaatctgaacc
tttcaaaagaagttaagagaccataaatacaacctttacctgagatgatg
aatcaaacatacctaaaagtcaaatggttcgggcctgatgtggaaagaga
cctgtttcaattattggcataaaaatacttacaaaatgatagctaatacc
tttaccaggtgtggtggcacatgcttttgattccagcactagggaggcag
gcagagctctatgttggaggccagcctagtctacatagtgtgttccaggc
agccaagactacataccttgtctcaaaaaaaaaaaaaaaaaaaaaaaaaa
aaagaatctggccatacttgtaagcctaagcaattaagaggttgacacaa
gtccaagacatagccctcagaaagctaaaaacacgtgaatacatttttat
ttcaacaaaacattttttaaaaatttccttaacagcaacttgtacctaac
ctgatttgattaaaaacgtaacaggtgaaatgactgaaacttttatagca
atgaagataaaggcatggttattatctgacaacgggttttaaaagcaaga
aaacagatgccagaggatacagtttatgatgtgggctgggggaggtggtt
cagtggttaagcacttgttcccaaaatcatgagaccagggtttagatccc
gagacccacatatatgtagcataatttcagccttgaagcagaagggaact
gtagagaagctgctagcagaagtagcattggcagccctgatttgactgaa
gacctgctcatggattagtgcaaggctgagatgatcctcgatgtacctct
agtctccaatgctagcccacc
gaattctcacctgaggaataccgaatggctgagaagcacctgaaaaaatg
ttcagcatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
ttcatctcacaccagtcagaacggctaagatcaaaaattcaggtgacaga
agatgctggcgaggatgtggaaaaagaggaacactcctccattgttgctg
ggattgcaagcttgtacaaccactctagaaatcaatctggtagttcctca
gaaaattggacatagtactaccggaggatccatcaatacctctcctgggc
atatatccagaagatgtcccaactggtaagaaggacacatgctccactat
gatcatagcagccttatttataatagccagaagctggaaagaacccagat
gtcactctctacatttttgagacaggcttttacactggacctatatagcg
catcattttgacaagactgatccagagagtcccaggatccagtgtgctca
cctcagcaatggattacaggtgagcgccaccacactggctcctgtgtgtg
tgctgagtatccaaactcagctcccatgcttgcaccacaagggctttgcc
cactgagccatttccccagccccaaagagaccacaacattctcatcaaac
ttaaatttgaatcccaccgagcttccccttaatgtagtcactgcccaagg
cagtctgtcacaacagaataaccctgctcaaaacatcaaggtcgagaagc
ttggtaggagacggtctaacatgatcttcagatgagcttgatggatgtgc
acttgaaagtacttcgttgatactgaaatgaagtccttcacgcaaactct
ctcaacacaaatgcactgagtttaaataacatcaaattaataattttaaa
aagaaactatttttctacaattatctctgaagctccaatatctctccaat
atagcagagaacaatcttcctcatttcagacaaccttggcatgtccacag
ttgagctgtgtactggtgttga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_59793673_59794816
seq2: B6Ng01-201O15.b_47_1167

seq1  GAATTCCTAACGGCAATGAAAGTCAAATGACTTAACCAACTAGTTACTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAACGGCAATGAAAGTCAAATGACTTAACCAACTAGTTACTCT  50

seq1  TTAGGTTTTGGATGCTTCATAGTAGATCTGACTATGAGCCAACAAAAAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTTTTGGATGCTTCATAGTAGATCTGACTATGAGCCAACAAAAAGC  100

seq1  TACACTAACAGGGGTTGTTCCTACTGTAATTGCAGAGAGAAAAGTTAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTAACAGGGGTTGTTCCTACTGTAATTGCAGAGAGAAAAGTTAGAA  150

seq1  TGAGATAATTTATATGTTTTTATTGTGTGGCTTTTTTTAGTATTTTTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATAATTTATATGTTTTTATTGTGTGGCTTTTTTTAGTATTTTTTTT  200

seq1  TTCTTTCCTAAATGGATTTCTCATAGTTTTCATTGTGGTTCAGTTTGGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCCTAAATGGATTTCTCATAGTTTTCATTGTGGTTCAGTTTGGGC  250

seq1  AGAGGTTGGGGGGTACTGAGGATCAAATACAAATTACTTTAATCTGAACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTTGGGGGGTACTGAGGATCAAATACAAATTACTTTAATCTGAACC  300

seq1  TTTCAAAAGAAGTTAAGAGACCATAAATACAACCTTTACCTGAGATGATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAAAGAAGTTAAGAGACCATAAATACAACCTTTACCTGAGATGATG  350

seq1  AATCAAACATACCTAAAAGTCAAATGGTTCGGGCCTGATGTGGAAAGAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAACATACCTAAAAGTCAAATGGTTCGGGCCTGATGTGGAAAGAGA  400

seq1  CCTGTTTCAATTATTGGCATAAAAATACTTACAAAATGATAGCTAATACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTTCAATTATTGGCATAAAAATACTTACAAAATGATAGCTAATACC  450

seq1  TTTACCAGGTGTGGTGGCACATGCTTTTGATTCCAGCACTAGGGAGGCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCAGGTGTGGTGGCACATGCTTTTGATTCCAGCACTAGGGAGGCAG  500

seq1  GCAGAGCTCTATGTTGGAGGCCAGCCTAGTCTACATAGTGTGTTCCAGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGCTCTATGTTGGAGGCCAGCCTAGTCTACATAGTGTGTTCCAGGC  550

seq1  AGCCAAGACTACATACCTTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAAGACTACATACCTTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAA  600

seq1  AAAGAATCTGGCCATACTTGTAAGCCTAAGCAATTAAGAGGTTGACACAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAATCTGGCCATACTTGTAAGCCTAAGCAATTAAGAGGTTGACACAA  650

seq1  GTCCAAGACATAGCCCTCAGAAAGCTAAAAACACGTGAATACATTTTTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAAGACATAGCCCTCAGAAAGCTAAAAACACGTGAATACATTTTTAT  700

seq1  TTCAACAAAACATTTTTTAAAAATTTCCTTAACAGCAACTTGTACCTAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACAAAACATTTTTTAAAAATTTCCTTAACAGCAACTTGTACCTAAC  750

seq1  CTGATTTGATTAAAAACGTAACAGGTGAAATGACTGAAACTTTTATAGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTTGATTAAAAACGTAACAGGTGAAATGACTGAAACTTTTATAGCA  800

seq1  ATGAAGATAAAGGCATGGTTATTATCTGACAAC-GGTTTTAAAAGCAAGA  849
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  ATGAAGATAAAGGCATGGTTATTATCTGACAACGGGTTTTAAAAGCAAGA  850

seq1  AAACAGATGCCAGAGGATACAGTTTATGATGTGGGCT-GGGGAGGTGGTT  898
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AAACAGATGCCAGAGGATACAGTTTATGATGTGGGCTGGGGGAGGTGGTT  900

seq1  CAGTGGTTAAGCACTTGTTCCCAAAAATCATGAGGACCAGGGTTTAGATC  948
      |||||||||||||||||||||| |||||||||| ||||||||||||||||
seq2  CAGTGGTTAAGCACTTGTTCCC-AAAATCATGA-GACCAGGGTTTAGATC  948

seq1  CCGAGAACCCACATATATGTAGCATAATTTCAGCCTTGGAAGGCAGAGAG  998
      ||||| ||||||||||||||||||||||||||||||| ||||    ||| 
seq2  CCGAG-ACCCACATATATGTAGCATAATTTCAGCCTT-GAAG---CAGAA  993

seq1  GGGAACGGTAGAGAAAGCTGGCTAGCGAGAGTAGCCAATGGGCAAGCCCT  1048
      |||||| |||||| ||||| ||||||   ||||||  || ||| ||||||
seq2  GGGAACTGTAGAG-AAGCT-GCTAGCAGAAGTAGC--ATTGGC-AGCCCT  1038

seq1  GGATTTGACTGAGAGACCCTGCCTCAATGAATTAGGTGCAAAGTGCTGGA  1098
       ||||||||||| ||| |||| ||| ||| |||| ||||||   ||||  
seq2  -GATTTGACTGA-AGA-CCTG-CTC-ATGGATTA-GTGCAA--GGCTG--  1078

seq1  AGATGATCCTCGATGTTAACCTCTAGTCTCCACATGCACGCCCACC  1144
      ||||||||||||||||  |||||||||||||| ||||  |||||||
seq2  AGATGATCCTCGATGT--ACCTCTAGTCTCCA-ATGCTAGCCCACC  1121