BAC Information

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BAC

Clone NameB6Ng01-201O20
Chromosome4 (Build37)
Map Location 69,538,525 - 69,539,611
singlet/doubletsinglet
Overlap genenone
Upstream geneDbc1, LOC622491, LOC433716
Downstream geneLOC100039888, LOC242497, LOC671064, Cdk5rap2, Megf9
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-201O20.bB6Ng01-201O20.g
ACCGA022565GA022566
length1,0891,191
definitionB6Ng01-201O20.b B6Ng01-201O20.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcctctgtggagaaagaaacttgtttctcaggatcatttgcata
aggttatccactatgttttattcattcattcattgtttcacaaatattta
ccaaacaggcacaatgtgcccagcacggtcttaacttctaaaaatagctg
agctgaagtcaattttttctcctcatgaaaactattttccagaagggaaa
gagaagtaatgagctaagaaataaaaggttcttttagataatgacaagga
caagacaaacatacgtggttgttgaaagggaaagaaaaatgtgatacaag
actcccagcaattgggtaggagagatctctgagagtagatgatgtctgag
ctagatattgtatatgaaaaaaaaaagcaatggaaatgtctcaagtaaga
ccctctagaccacgaaaacagcaagcagaaagctgaggcaagaaggagct
ttctgtccaagtagccagtgagagctgaggaggaaggcaggacagctgag
atcagagagaggaacagtgcctagctatgggaaccacagaagtcatggta
gggttggaatcccatctatgtaaagatctctatccacctggctttaaagc
tcagattggtgtcaccagttactgcgcagcccctccaacaaatacaggat
attcccaaagaagcatcctgagatggcccttgggagtgacttggtgggtg
actcctgatctgtggtttatagatgtctaagagtcaatggaatcagtctt
gagatgctctgtctgcagacagggatacgataccatttatccgaggtcag
aatgccaaggtcaggtcagattttcttaaagacctagaccatgcatgtat
gtatttagtgttcaataaatgttcactctgcttccactctcatgatgcac
aaggtattctctgtacagctgatataggttgaaacatatggtttgcttga
gagtggaagccagcatatgtgattcaagtggctttaatataccatgtata
gagttcattgacctgtgttcttattacataccattaggagcattcctaag
atcttgtccctcttgtcctggttcctcccaataaaacac
gaattccaggaaatgagaatgtgtctggtcatcctccacaaaatggtaat
actgtgaacttcagggcagccctgaaataactgtggctgtgagaaataac
tttgaaaacatgagttcaagaatacttaaatcaatataagaactgttctt
tacagggttttgcaactactcaaaacatatggatgccatatgaattctat
gagaggcctcatgaacctgaaagaacagaggcagctacattcatgcacca
gctttgtcagaaagattttaaggaagaagataaagagatttggggagtag
taatctcagggctaaatatattgtttgtatttgcagttgaataatgaata
gtttgggattctaatctggaatggactacaatccagaaatagagggcata
cttgtgatccatatcctgaggctggaagacatagatattcaatccagatc
ttgaagaatattggccatgaaaagattaggcccaggggtagtggtaatcc
taggagaaaaaggtaaacagattgctgagctcaaggtcatcttgggacaa
agtaggttctaggtgatggaaagcttaggtctaggcatggtggtacatgc
ctttaataccagttttcaggagacagatccatgcagatctctgagttcaa
ggtttgtctacagagccagttccaggacaaccaagcttaggcagcaaagt
attgagaaaacagtgctgatgataatgtaataaaacaaggggagggggaa
tattccagatccagcaagcagcagaatttagcagctttggccatgtggct
ctgtctttagagtcaagagccaaggacttaaaatgatgactcatgggata
accaaaaggaaacctcaggtaaatggatgaaagatctgtaatacctaagg
aagttgctgaggcaaaaatgaagactggggtttggtctgcagagagagct
atttagacagagagatatcttgagcagacacaggagctgtcagcttgtca
tgactctgagtattaatctttccaccttttaagcacacctcttcaggacc
tattggccaagtgtgagcctagccttcagccaggcaccctaagtttatag
ccataaatgaataaggagaaagcaagcgtctaactcctccatgagataaa
tcctgaatgaaatttcccagcggattcatctccgtgtctta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_69538525_69539611
seq2: B6Ng01-201O20.b_47_1135

seq1  GAATTCTCCTCTGTGGAGAAAGAAACTTGTTTCTCAGGATCATTTGCATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTCTGTGGAGAAAGAAACTTGTTTCTCAGGATCATTTGCATA  50

seq1  AGGTTATCCACTATGTTTTATTCATTCATTCATTGTTTCACAAATATTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTATCCACTATGTTTTATTCATTCATTCATTGTTTCACAAATATTTA  100

seq1  CCAAACAGGCACAATGTGCCCAGCACGGTCTTAACTTCTAAAAATAGCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACAGGCACAATGTGCCCAGCACGGTCTTAACTTCTAAAAATAGCTG  150

seq1  AGCTGAAGTCAATTTTTTCTCCTCATGAAAACTATTTTCCAGAAGGGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAAGTCAATTTTTTCTCCTCATGAAAACTATTTTCCAGAAGGGAAA  200

seq1  GAGAAGTAATGAGCTAAGAAATAAAAGGTTCTTTTAGATAATGACAAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGTAATGAGCTAAGAAATAAAAGGTTCTTTTAGATAATGACAAGGA  250

seq1  CAAGACAAACATACGTGGTTGTTGAAAGGGAAAGAAAAATGTGATACAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGACAAACATACGTGGTTGTTGAAAGGGAAAGAAAAATGTGATACAAG  300

seq1  ACTCCCAGCAATTGGGTAGGAGAGATCTCTGAGAGTAGATGATGTCTGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCCAGCAATTGGGTAGGAGAGATCTCTGAGAGTAGATGATGTCTGAG  350

seq1  CTAGATATTGTATATGAAAAAAAAAAGCAATGGAAATGTCTCAAGTAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGATATTGTATATGAAAAAAAAAAGCAATGGAAATGTCTCAAGTAAGA  400

seq1  CCCTCTAGACCACGAAAACAGCAAGCAGAAAGCTGAGGCAAGAAGGAGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTAGACCACGAAAACAGCAAGCAGAAAGCTGAGGCAAGAAGGAGCT  450

seq1  TTCTGTCCAAGTAGCCAGTGAGAGCTGAGGAGGAAGGCAGGACAGCTGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTCCAAGTAGCCAGTGAGAGCTGAGGAGGAAGGCAGGACAGCTGAG  500

seq1  ATCAGAGAGAGGAACAGTGCCTAGCTATGGGAACCACAGAAGTCATGGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAGAGAGGAACAGTGCCTAGCTATGGGAACCACAGAAGTCATGGTA  550

seq1  GGGTTGGAATCCCATCTATGTAAAGATCTCTATCCACCTGGCTTTAAAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTGGAATCCCATCTATGTAAAGATCTCTATCCACCTGGCTTTAAAGC  600

seq1  TCAGATTGGTGTCACCAGTTACTGCGCAGCCCCTCCAACAAATACAGGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATTGGTGTCACCAGTTACTGCGCAGCCCCTCCAACAAATACAGGAT  650

seq1  ATTCCCAAAGAAGCATCCTGAGATGGCCCTTGGGAGTGACTTGGTGGGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCAAAGAAGCATCCTGAGATGGCCCTTGGGAGTGACTTGGTGGGTG  700

seq1  ACTCCTGATCTGTGGTTTATAGATGTCTAAGAGTCAATGGAATCAGTCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTGATCTGTGGTTTATAGATGTCTAAGAGTCAATGGAATCAGTCTT  750

seq1  GAGATGCTCTGTCTGCAGACAGGGATACGATACCATTTATCCGAGGTCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGCTCTGTCTGCAGACAGGGATACGATACCATTTATCCGAGGTCAG  800

seq1  AATGCCAAGGTCAGGTCAGATTTTCTTAAAGACCTAGACCATGCATGTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCCAAGGTCAGGTCAGATTTTCTTAAAGACCTAGACCATGCATGTAT  850

seq1  GTA-TTAGTGTTCAATAAATGTTCACTCTGCTTCCACTCTCATGATGCAC  899
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTAGTGTTCAATAAATGTTCACTCTGCTTCCACTCTCATGATGCAC  900

seq1  AAGGTATTCTCTGTACAGCTGATATAGGTTGAAACATATGGTTTGCTTTG  949
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AAGGTATTCTCTGTACAGCTGATATAGGTTGAAACATATGGTTTGC-TTG  949

seq1  AGAGTGGAAGCCAGCATATGTGATTCAAGTGGC-TTAATATACCATGTAT  998
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AGAGTGGAAGCCAGCATATGTGATTCAAGTGGCTTTAATATACCATGTAT  999

seq1  AGAGTTCATTGACCCTGTGTTCTTATAACATACCA-TAAGAGCATT-CTA  1046
      |||||||||||| ||||||||||||| |||||||| || ||||||| |||
seq2  AGAGTTCATTGA-CCTGTGTTCTTATTACATACCATTAGGAGCATTCCTA  1048

seq1  AGATCCTTTGTCCCTCT--GCCTGG-TCCTCCCAATAAACACAC  1087
      |||||  ||||||||||   ||||| ||||||||||||| ||||
seq2  AGATC--TTGTCCCTCTTGTCCTGGTTCCTCCCAATAAA-ACAC  1089