BAC Information

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BAC

Clone NameB6Ng01-202G20
Chromosome4 (Build37)
Map Location 51,431,834 - 51,432,891
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040979, LOC666681, LOC100040814
Downstream geneLOC384015, LOC100041026, LOC100041038, LOC666724
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-202G20.bB6Ng01-202G20.g
ACCGA022921GA022922
length1,0651,186
definitionB6Ng01-202G20.b B6Ng01-202G20.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagcacagcctgacaaggaggaccctccagtaacttccttggcat
gcagcctaaggcatgtaatgtagcagcatccaacctcctccgtatctcag
aacagaaagcaatctgcagggaagggagttagggaccctgtcttggatgg
agaaccgacaattttctaaaggagtacatgggaccataaacattactgca
accattttcaggaatgacagcctctcacctgtgcacttctctctaagtta
tgtttagatccaggatttatttgatgaataaaaagagagggagcatacag
tcagtcatattctacacaattcattaaaatgctaatttgagcttctcttc
ctcttttctgtttggagagaatcagcaaaaatacacatatccttaaagta
gatagcgtcacatccttatgaattcagggagtcccttatctgttgtttct
ttcataaatttgttattgcttcccagaactttctagtcctcatttccatt
cattttcaccccgtgagaatctcatatatcttacttgtgaagctgcttcc
ttgagaatatctgcatgttaaaaactgaattttagcccagaaagtttttg
tcattgtttgttattttccagaatattctccatttctttactggaaagca
aactattttacttgatgcttgactttctcctcctttcccacatttgtgga
aacatataattcctgtttttgaatgaattaaatgtgataattctaagtgt
atttctgagactgagattactatatatcctgacttcatccccatactaat
ggctgctactaaccacagtcttcctcatgtagaggaggtgagcttactta
catctctacttctcctctgtgtatataaataatgcactcaacagcatcca
aatccttggttaagaattccacaattattgtccaaagtcaaaattgatga
ttattattataaacatgttttttatcatgtccaaatcatgaataagtccc
aacacaacttaaccacacataatcttccacattcttatattcactagttt
taatacaataacaca
gaattcttaacaacaaaagaacatctgggggaatcaccgtccctgacctc
aagttttactacagagcaatagtgataaaaactgaatggtattggtacag
tgacagacacgtttatcaatggaataaaattgaagacccagaaataaaac
tacacatttacagacacatgatctttgaccaagatgccaaaaatatataa
tggaaaaatgaaagcaccttcaataaatggtacttgtctagctggctggc
tgtatggagaaaaatgaaaatagacccatatttgccaccttgcacaaagc
ttaagtgcaagtggaacaagaacctagacataaaaccagatacactgaat
ctaatagaagagaaagtgggaaagagtcttgaactcattgacatagggag
aaatttacaaaacataactccaatagttcatactctaagatcaagagttg
ataaatgggagctcatgaaactggaaagtctctgtaatgtaaagcaccta
atccataagacaaatgcgcaccttcagagtaggaaaaaaagcttcactaa
ccccacacataatagagggctaatatacaaaatatataacaaagtcaaga
agctaaccacccaaaaagccaaacaacccaacaaaaacaaatggagtata
gaactaaagggagaattcacaacagaggaatctagaatggctgagaagaa
atgttcaaagtccttaatgatcagagaaacgtaaatcaaaactaccttga
gattctaccttataacaatcataatggctaagatcaaaacctcagttgat
aacacatgatggatatgatgtggagaaagaacactcctccattgctggtg
gtattgcaaactagtacaaccactctggaagtctatctggagtttcctca
gaaaactggaaatagatctacctgaagatagagctataccactcttggga
gtatacccaaaagatgtcccaccatgccacagtagcacacattccactat
gttcatagaggctgtgtgatagtcagagctggaaaaacccatttgtcatg
aagagatggatacaggaaaatgtgtcattaacacaatgaaatactaactc
agtattaggatggagggagctgggtgtggtgcaatgcctttcatcaagca
cttgggaggcagaagtaagcagaatttctctgaagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_51431834_51432891
seq2: B6Ng01-202G20.b_45_1109

seq1  GAATTCAGCACAGCCTGACAAGGAGGACCCTCCAGTAACTTCCTTGGCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCACAGCCTGACAAGGAGGACCCTCCAGTAACTTCCTTGGCAT  50

seq1  GCAGCCTAAGGCATGTAATGTAGCAGCATCCAACCTCCTCCGTATCTCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCCTAAGGCATGTAATGTAGCAGCATCCAACCTCCTCCGTATCTCAG  100

seq1  AACAGAAAGCAATCTGCAGGGAAGGGAGTTAGGGACCCTGTCTTGGATGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAAAGCAATCTGCAGGGAAGGGAGTTAGGGACCCTGTCTTGGATGG  150

seq1  AGAACCGACAATTTTCTAAAGGAGTACATGGGACCATAAACATTACTGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCGACAATTTTCTAAAGGAGTACATGGGACCATAAACATTACTGCA  200

seq1  ACCATTTTCAGGAATGACAGCCTCTCACCTGTGCACTTCTCTCTAAGTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTTTCAGGAATGACAGCCTCTCACCTGTGCACTTCTCTCTAAGTTA  250

seq1  TGTTTAGATCCAGGATTTATTTGATGAATAAAAAGAGAGGGAGCATACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAGATCCAGGATTTATTTGATGAATAAAAAGAGAGGGAGCATACAG  300

seq1  TCAGTCATATTCTACACAATTCATTAAAATGCTAATTTGAGCTTCTCTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCATATTCTACACAATTCATTAAAATGCTAATTTGAGCTTCTCTTC  350

seq1  CTCTTTTCTGTTTGGAGAGAATCAGCAAAAATACACATATCCTTAAAGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTTCTGTTTGGAGAGAATCAGCAAAAATACACATATCCTTAAAGTA  400

seq1  GATAGCGTCACATCCTTATGAATTCAGGGAGTCCCTTATCTGTTGTTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGCGTCACATCCTTATGAATTCAGGGAGTCCCTTATCTGTTGTTTCT  450

seq1  TTCATAAATTTGTTATTGCTTCCCAGAACTTTCTAGTCCTCATTTCCATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATAAATTTGTTATTGCTTCCCAGAACTTTCTAGTCCTCATTTCCATT  500

seq1  CATTTTCACCCCGTGAGAATCTCATATATCTTACTTGTGAAGCTGCTTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTCACCCCGTGAGAATCTCATATATCTTACTTGTGAAGCTGCTTCC  550

seq1  TTGAGAATATCTGCATGTTAAAAACTGAATTTTAGCCCAGAAAGTTTTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAATATCTGCATGTTAAAAACTGAATTTTAGCCCAGAAAGTTTTTG  600

seq1  TCATTGTTTGTTATTTTCCAGAATATTCTCCATTTCTTTACTGGAAAGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGTTTGTTATTTTCCAGAATATTCTCCATTTCTTTACTGGAAAGCA  650

seq1  AACTATTTTACTTGATGCTTGACTTTCTCCTCCTTTCCCACATTTGTGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATTTTACTTGATGCTTGACTTTCTCCTCCTTTCCCACATTTGTGGA  700

seq1  AACATATAATTCCTGTTTTTGAATGAATTAAATGTGATAATTCTAAGTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATATAATTCCTGTTTTTGAATGAATTAAATGTGATAATTCTAAGTGT  750

seq1  ATTTCTGAGACTGAGATTACTATATATCCTGACTTCATCCCCATACTAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTGAGACTGAGATTACTATATATCCTGACTTCATCCCCATACTAAT  800

seq1  GGCTGCTACTAA-CACAGTCTTCCTCATGTAGA-GAGGTGAGCTTACTTA  848
      |||||||||||| |||||||||||||||||||| ||||||||||||||||
seq2  GGCTGCTACTAACCACAGTCTTCCTCATGTAGAGGAGGTGAGCTTACTTA  850

seq1  CATCTCTACTTCT-CTCTGTGTATAT-AATAATGCACTC-ACAGCATCCA  895
      ||||||||||||| |||||||||||| |||||||||||| ||||||||||
seq2  CATCTCTACTTCTCCTCTGTGTATATAAATAATGCACTCAACAGCATCCA  900

seq1  AATCCTTGGTTAAG-ATTTCACAATTATTGTTCCAAAGTCAAAATTGATG  944
      |||||||||||||| ||| ||||||||||| |||||||||||||||||||
seq2  AATCCTTGGTTAAGAATTCCACAATTATTG-TCCAAAGTCAAAATTGATG  949

seq1  A-TAT--ATATAAACATGTTTTTAATTCAGTGTCCAAATCATG-ATAAGT  990
      | |||   ||||||||||||||| | ||| ||||||||||||| ||||||
seq2  ATTATTATTATAAACATGTTTTTTA-TCA-TGTCCAAATCATGAATAAGT  997

seq1  CACACACA-AACATAAACACACAATATACT-CACATTCTTATATTCACCT  1038
      | || ||| ||| ||| ||||||  ||  | |||||||||||||||| ||
seq2  CCCA-ACACAACTTAACCACACATAATCTTCCACATTCTTATATTCA-CT  1045

seq1  AGTTTTATATCAATAACACA  1058
      |||||||   ||||||||||
seq2  AGTTTTAATACAATAACACA  1065