BAC Information

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BAC

Clone NameB6Ng01-202H20
Chromosome4 (Build37)
Map Location 24,136,027 - 24,137,150
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC625462, LOC383998, LOC100040464, LOC623873
Downstream geneLOC664973, F730047E07Rik, Klhl32, 1110007M04Rik, C230012O17Rik, Gpr63, Fhl5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-202H20.bB6Ng01-202H20.g
ACCGA022969GA022970
length1,1911,109
definitionB6Ng01-202H20.b B6Ng01-202H20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccatttttaatggggttatttgcttt
tctgaagtccaccttcttgagttctttatatatgttggatattagtcccc
tatctgatttaggataggtaaagatcctttcccaatctgttggtggtctc
tttgtcttattgacggtgtcttttgctttgcagaaactttggagtttcat
taggtcccatttgtcaattctcgatcttacagcacaagccattgctgttc
tgttcaggaatttttcccctgttcccatatcttcaaggcttttccccact
ttctcctctataagtttcagtgtctctggttttatgtgaagttctttgat
ccatttagatttgaccttagtacaaggagataagtatggatcgattcgca
ttcttctacacgataacaaccagttgtgccagtaccaattgttgaaaatg
ctgtctttcttccactggatggttttagctcccttgtcgaagatcaagtg
accataggtgtgtggattcatctctgggtcttcaattctattccattggt
ctacttgtctgtctctataccagtaccatgcagtttttaccacaattgct
ctgtagtaaagctttaggtcaggcatggtgattccaccagaggttctttt
atccttgagaagagtttttgctatcctaggttttttgttattccagatga
atttgcaaatttctccttctaattcgttgaagaattgagttggaattttg
atggggattgcattgaatctgtagattgcttttggcaagatagccatttt
tacaatgttgatcctgccaatccatgagcatgggagatctttccatcttc
tgagatcttctttaatttctttcttcagagacttgaagtttttatcatac
agatctttcacttccttagttagagtcactccgagatatttatattattt
gtgactattgagaaggtgttgtttccctaatttctttctcagcctgttat
tctatgtgtagagaaggcattgacttgtttgagttagtttaatatccagc
tacttcgacgaagctgatttatcagtttagagtctctgcttggcaatttt
gttagggtccactactaatactatctatcagctgcaaactggaattggac
ttccgccaatttcaattgaattcccttgaatctcgccccat
gaattcttttatctatgtataatactaagagtagttattcggggaactaa
taacttcattggacatagagccccaaattcaattttatagctcactgtcc
ctgtaaatagaaaaagtctgccaaagctgcctttataaatattagtgatt
tcatgttttaccatatgtattgggctagcaaaatgagaagggaaatttga
tctatttttcccttggacaataaactcttttgttttttttctgcaatgtt
tggttattaatttctatattattcaaatgcatatatctggcattagttat
ttctataaagttcaagagtacttgaaaaaaatatttgcctcttcctcaga
ggagaattcagcctctagaatttgaataggccatcaatcctcattttcta
gtcattgagcagcaagggctacaatgatcttctcttaccatattgttatt
agaagggaatacattgctcactacctggcagtggacttcatttaagattc
ctagttccaatgagaaatttactgaatgaaacacaatgcttaggaaaaaa
aaatacagctagaaagagtaatccgcttcctgcaaagcaagaaactcttt
ttgtgaggaggatgaggccctaatgttgatagttttcaacattatttggt
aatattttccaagaaaaagtatatttattagagattttcatttttattaa
gctgtaacgtaaaagttagtagttttattgaccagatttttttttcatat
aattttttattaggtattttcttcatttacatttcaagtgctatcccaaa
agtcccccataccctcccacccacttccacttcttggctctggcgttccc
ctgtactgaggcatataaagtttgcaagaccaatgggcctctcttttcac
tgatggccaactaggccatcctctgatacatatgtagctagagacacgag
ctccaggggtactggatagttcatatatgtccactatagggttgcagacc
ctttagctctggtactttctctagctcctcatggggccctgtgatccatc
atagctgactgtgagcatcactatgtgtttgctaggacccgacatagtct
cacaagaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_24136027_24137150
seq2: B6Ng01-202H20.g_66_1174 (reverse)

seq1  TCTCTTGTGAGACTATGTCGGGGCCTAGCAAACACATAAGTGGATGCTCA  50
      |||||||||||||||||||||| |||||||||||||| ||| ||||||||
seq2  TCTCTTGTGAGACTATGTCGGGTCCTAGCAAACACAT-AGT-GATGCTCA  48

seq1  CAGTCAGCTATTGGATGGATCACAGGGCCCCCAATGGAGGAGCTAGAGAA  100
      |||||||||||  ||||||||||||||||||  || ||||||||||||||
seq2  CAGTCAGCTAT--GATGGATCACAGGGCCCC--AT-GAGGAGCTAGAGAA  93

seq1  AGTACCCAAGGAGCTAAAGGGGTCTGCAACCCTATAGGTGGAACAATAAT  150
      ||||||    |||||||| ||||||||||||||||| |||| |||   ||
seq2  AGTACC---AGAGCTAAA-GGGTCTGCAACCCTATA-GTGG-ACA--TAT  135

seq1  ATGAACTAACCAGTACCCCTGGAGCTCGTGTCTCTAGCTACATATGTATC  200
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACTATCCAGTACCCCTGGAGCTCGTGTCTCTAGCTACATATGTATC  185

seq1  AGAGGATGGCCTAGTTGGCCATCAGTGAAAAGAGAGGCCCATTGGTCTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGATGGCCTAGTTGGCCATCAGTGAAAAGAGAGGCCCATTGGTCTTG  235

seq1  CAAACTTTATATGCCTCAGTACAGGGGAACGCCAGAGCCAAGAAGTGGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTTTATATGCCTCAGTACAGGGGAACGCCAGAGCCAAGAAGTGGAA  285

seq1  GTGGGTGGGAGGGTATGGGGGACTTTTGGGATAGCACTTGAAATGTAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTGGGAGGGTATGGGGGACTTTTGGGATAGCACTTGAAATGTAAAT  335

seq1  GAAGAAAATACCTAATAAAAAATTATATGAAAAAAAAATCTGGTCAATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAAATACCTAATAAAAAATTATATGAAAAAAAAATCTGGTCAATAA  385

seq1  AACTACTAACTTTTACGTTACAGCTTAATAAAAATGAAAATCTCTAATAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTACTAACTTTTACGTTACAGCTTAATAAAAATGAAAATCTCTAATAA  435

seq1  ATATACTTTTTCTTGGAAAATATTACCAAATAATGTTGAAAACTATCAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACTTTTTCTTGGAAAATATTACCAAATAATGTTGAAAACTATCAAC  485

seq1  ATTAGGGCCTCATCCTCCTCACAAAAAGAGTTTCTTGCTTTGCAGGAAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGGGCCTCATCCTCCTCACAAAAAGAGTTTCTTGCTTTGCAGGAAGC  535

seq1  GGATTACTCTTTCTAGCTGTATTTTTTTTTCCTAAGCATTGTGTTTCATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTACTCTTTCTAGCTGTATTTTTTTTTCCTAAGCATTGTGTTTCATT  585

seq1  CAGTAAATTTCTCATTGGAACTAGGAATCTTAAATGAAGTCCACTGCCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAAATTTCTCATTGGAACTAGGAATCTTAAATGAAGTCCACTGCCAG  635

seq1  GTAGTGAGCAATGTATTCCCTTCTAATAACAATATGGTAAGAGAAGATCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTGAGCAATGTATTCCCTTCTAATAACAATATGGTAAGAGAAGATCA  685

seq1  TTGTAGCCCTTGCTGCTCAATGACTAGAAAATGAGGATTGATGGCCTATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGCCCTTGCTGCTCAATGACTAGAAAATGAGGATTGATGGCCTATT  735

seq1  CAAATTCTAGAGGCTGAATTCTCCTCTGAGGAAGAGGCAAATATTTTTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTCTAGAGGCTGAATTCTCCTCTGAGGAAGAGGCAAATATTTTTTT  785

seq1  CAAGTACTCTTGAACTTTATAGAAATAACTAATGCCAGATATATGCATTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTACTCTTGAACTTTATAGAAATAACTAATGCCAGATATATGCATTT  835

seq1  GAATAATATAGAAATTAATAACCAAACATTGCAGAAAAAAAACAAAAGAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAATATAGAAATTAATAACCAAACATTGCAGAAAAAAAACAAAAGAG  885

seq1  TTTATTGTCCAAGGGAAAAATAGATCAAATTTCCCTTCTCATTTTGCTAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTGTCCAAGGGAAAAATAGATCAAATTTCCCTTCTCATTTTGCTAG  935

seq1  CCCAATACATATGGTAAAACATGAAATCACTAATATTTATAAAGGCAGCT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAATACATATGGTAAAACATGAAATCACTAATATTTATAAAGGCAGCT  985

seq1  TTGGCAGACTTTTTCTATTTACAGGGACAGTGAGCTATAAAATTGAATTT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCAGACTTTTTCTATTTACAGGGACAGTGAGCTATAAAATTGAATTT  1035

seq1  GGGGCTCTATGTCCAATGAAGTTATTAGTTCCCCGAATAACTACTCTTAG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCTCTATGTCCAATGAAGTTATTAGTTCCCCGAATAACTACTCTTAG  1085

seq1  TATTATACATAGATAAAAGAATTC  1124
      ||||||||||||||||||||||||
seq2  TATTATACATAGATAAAAGAATTC  1109