BAC Information

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BAC

Clone NameB6Ng01-204E24
Chromosome4 (Build37)
Map Location 110,795,951 - 110,797,043
singlet/doubletsinglet
Overlap genenone
Upstream geneElavl4
Downstream geneLOC100040381, 2310026E23Rik, Spata6, LOC621612, Slc5a9, LOC639774, C130057D23Rik, LOC639781, 9530098N22Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-204E24.bB6Ng01-204E24.g
ACCGA024290GA024291
length1,096495
definitionB6Ng01-204E24.b B6Ng01-204E24.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatacttcagtaaaatgagggtatgaaatggagtctttgttctga
gtagccatgttctgtctgataattggttataaaggataattgatattgag
ggacagctaaagtctctgccacaggaagcctcaattctgcttccaactct
aacatcacacagcttgtatgttacctttcttggggtgattttcattttat
tataaagcaaaaaaaaattggaattgaacaaagtttcaaattattcttta
agtttctcatagaaaaatgtataagtgttttagattccataagaggcatg
gtagggacatatgagaaggttgtacaaggcctcagtttgttttcagaagt
aaatgtattctatatcttagaatctatacatgcccaaatatattttaaag
catataattaaagatatgaattatttaaagagttagggttcagaataaac
agcatgcagaagataagctgtaacttgtatactgagagatgagtgaggtt
actgaatacaaggctgagaataaggttactcggaaaactgagggccagtt
cattacacagtgatatttagttagatatctggcttgtttggaatagggaa
ttcttggaagattaagatatacaggaatattgaagttaacatcttagaaa
accttcactgtcatattggctatgttctgcttccagatgttggatctttt
tctttatatggacactcctaatttttttctcacagtagctcatggagtag
gaaaaatttctccagggacaaaatgaagctaaaaagtaagttcttttgct
aagttcacgtgtatgagggtcaatactaattaatttaattctaatactct
tccctgcccctctaatagcacattgagactcatgttaaggaagtaatctg
atgaatggtcaaaggtttactgtgccatataaaacagattgggaatgctg
tggggtccattcagtcctcataggttgagcctcaaccagattactaaagt
tttggggggaattctggcatactttctgtaggcaaaacactcttggattg
ggtttacaggtatttaatatggttttgatgtgaagcatccaccata

cgcggaattcctctctctctccctccctccctctcctctctcctctcttc
ctcttttcctctcctcctttcccctcccctcccctcccatcccctctctt
tttttttttcttttcttctcttatttccttttctcattctattctctccc
ctctccttcttcttcttcttcttctttttcttcttcgtcttttttttttt
cttatagaagaggatcaatttaaggtatatgagtttagcctgcagatgtg
ggagttttatgctctggataacatttgtagaaaaggagatggtttagagg
cgacggtattgttgttgaaccagtcctttgcttgggtgcagttatcttct
tataccctattctgtgccctgagccgatggggtcggaagtaaaataaata
ccccaacttatttacttaccgtgttgagatgaaatgactagaccataact
tactcttgaacattaaaagtcatttcgggataaggcaacggatct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_110795951_110797043
seq2: B6Ng01-204E24.b_44_1139

seq1  GAATTCATACTTCAGTAAAATGAGGGTATGAAATGGAGTCTTTGTTCTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATACTTCAGTAAAATGAGGGTATGAAATGGAGTCTTTGTTCTGA  50

seq1  GTAGCCATGTTCTGTCTGATAATTGGTTATAAAGGATAATTGATATTGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCCATGTTCTGTCTGATAATTGGTTATAAAGGATAATTGATATTGAG  100

seq1  GGACAGCTAAAGTCTCTGCCACAGGAAGCCTCAATTCTGCTTCCAACTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGCTAAAGTCTCTGCCACAGGAAGCCTCAATTCTGCTTCCAACTCT  150

seq1  AACATCACACAGCTTGTATGTTACCTTTCTTGGGGTGATTTTCATTTTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCACACAGCTTGTATGTTACCTTTCTTGGGGTGATTTTCATTTTAT  200

seq1  TATAAAGCAAAAAAAAATTGGAATTGAACAAAGTTTCAAATTATTCTTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAGCAAAAAAAAATTGGAATTGAACAAAGTTTCAAATTATTCTTTA  250

seq1  AGTTTCTCATAGAAAAATGTATAAGTGTTTTAGATTCCATAAGAGGCATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCTCATAGAAAAATGTATAAGTGTTTTAGATTCCATAAGAGGCATG  300

seq1  GTAGGGACATATGAGAAGGTTGTACAAGGCCTCAGTTTGTTTTCAGAAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGGACATATGAGAAGGTTGTACAAGGCCTCAGTTTGTTTTCAGAAGT  350

seq1  AAATGTATTCTATATCTTAGAATCTATACATGCCCAAATATATTTTAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTATTCTATATCTTAGAATCTATACATGCCCAAATATATTTTAAAG  400

seq1  CATATAATTAAAGATATGAATTATTTAAAGAGTTAGGGTTCAGAATAAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATAATTAAAGATATGAATTATTTAAAGAGTTAGGGTTCAGAATAAAC  450

seq1  AGCATGCAGAAGATAAGCTGTAACTTGTATACTGAGAGATGAGTGAGGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGCAGAAGATAAGCTGTAACTTGTATACTGAGAGATGAGTGAGGTT  500

seq1  ACTGAATACAAGGCTGAGAATAAGGTTACTCGGAAAACTGAGGGCCAGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAATACAAGGCTGAGAATAAGGTTACTCGGAAAACTGAGGGCCAGTT  550

seq1  CATTACACAGTGATATTTAGTTAGATATCTGGCTTGTTTGGAATAGGGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTACACAGTGATATTTAGTTAGATATCTGGCTTGTTTGGAATAGGGAA  600

seq1  TTCTTGGAAGATTAAGATATACAGGAATATTGAAGTTAACATCTTAGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGGAAGATTAAGATATACAGGAATATTGAAGTTAACATCTTAGAAA  650

seq1  ACCTTCACTGTCATATTGGCTATGTTCTGCTTCCAGATGTTGGATCTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCACTGTCATATTGGCTATGTTCTGCTTCCAGATGTTGGATCTTTT  700

seq1  TCTTTATATGGACACTCCTAATTTTTTTCTCACAGTAGCTCATGGAGTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTATATGGACACTCCTAATTTTTTTCTCACAGTAGCTCATGGAGTAG  750

seq1  GAAAAATTTCTCCAGGGACAAAATGAAGCTAAAAAGTAAGTTCTTTTGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAATTTCTCCAGGGACAAAATGAAGCTAAAAAGTAAGTTCTTTTGCT  800

seq1  AAGTTCACGTGTATGAGGGTCAATACTAATTAATTTAATTCTAATACTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCACGTGTATGAGGGTCAATACTAATTAATTTAATTCTAATACTCT  850

seq1  TCCCTGCCCCTCTAATAGCACATTGAGACTCATGTTAAGGAAGTAAATCT  900
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TCCCTGCCCCTCTAATAGCACATTGAGACTCATGTTAAGGAAGT-AATCT  899

seq1  GATGAATGGTC-AAGGTTTACTGTGCCATATAAAACAGATTGGGGAATGC  949
      ||||||||||| ||||||||||||||||||||||||||||| ||||||||
seq2  GATGAATGGTCAAAGGTTTACTGTGCCATATAAAACAGATT-GGGAATGC  948

seq1  TGT-GGGTCCATTCAGTCCTCATA-GTTGAGCCTCAAACCAGA-TACTAA  996
      ||| |||||||||||||||||||| |||||||||| ||||||| ||||||
seq2  TGTGGGGTCCATTCAGTCCTCATAGGTTGAGCCTC-AACCAGATTACTAA  997

seq1  AGTTTT-GGGGGAATTCTGGCATAC-TTCTGTAGGCAAAACAACTCTTGG  1044
      |||||| |||||||||||||||||| ||||||||||||||| ||||||||
seq2  AGTTTTGGGGGGAATTCTGGCATACTTTCTGTAGGCAAAAC-ACTCTTGG  1046

seq1  TTTGGG-TTACAGGGTATTTAATATGGTTTGTATGTGAAGCAT-CACCAT  1092
       ||||| ||||| |||||||||||||||||  ||||||||||| ||||||
seq2  ATTGGGTTTACA-GGTATTTAATATGGTTTTGATGTGAAGCATCCACCAT  1095

seq1  A  1093
      |
seq2  A  1096


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