BAC Information

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BAC

Clone NameB6Ng01-205G12
Chromosome4 (Build37)4 (Build37)
Map Location 146,364,571 - 146,365,413145,589,751 - 145,590,838
singlet/doubletsingletsinglet
Overlap genenone
Upstream gene1700029I01Rik, LOC236069, LOC384084, LOC666386, LOC666390, LOC100041433, LOC433790, LOC433791, Rex2, LOC100043012, LOC100041461, LOC630093, OTTMUSG00000010105, LOC666445, MGC117846, OTTMUSG00000010694, LOC626480, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498
Downstream geneLOC100043034, LOC666514, LOC100041561, LOC100041570, OTTMUSG00000010657, LOC384087, LOC666546, LOC666557, LOC545716, LOC666574, LOC666581, EG666588, LOC627701, OTTMUSG00000010671, LOC545718, OTTMUSG00000010673, 2610305D13Rik, LOC666618, LOC100043100, LOC666640, LOC194189, LOC666652, LOC100041677, LOC277692, MGC67181, D4Wsu114e, Fv1, Mfn2, Plod1, 2510039O18Rik, Nppb
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-205G12.bB6Ng01-205G12.g
ACCGA025094GA025095
length1,1781,090
definitionB6Ng01-205G12.b B6Ng01-205G12.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(146,364,571 - 146,365,413)(145,589,751 - 145,590,838)
sequence
gaattcatacaagagagaaaccttacaaatgcagtgaatgtgacaaatgc
tttaccaaacaatccaaacttagtattcatcagagaattcatacaggaga
gaaaccttacaaatgcagtgaatgtgacaaatgctttaccaaacaatcca
aacttagtattcatcagagaattcatacaggagagaaaccttacaaatgc
agtgaatgtgacaaatgctttaatgaaaaaaacagtctgaaaattcatca
gagaattcatacaggagagagaccttacaaatgtagtgaatgtgacaaat
gcttttcccgaaaattctatcttggtattcatcagagaattcatacagga
aagaaaccttacaaatgtagtgaatgtgacaaatgctttacccaaaaatc
ctgtcttaatattcatcagagaattcatgcaggagagaaaccttacaaat
gcagtgaatgtgacaaatgctttactacaaaaggcaatctgataattcat
cagagaattcatacaggagagaaaccttacaaatgtagtgaatgtgacaa
atgctttacccagaaatcccatcttagtattcatcagaaaattcatacag
gagagaaaccttacaaatagattgtatgtgacaaatacaatactcacaat
gtcagtcttagaaatcatcagttatttcatacagtagagaatctttataa
atgaagtgaatgagacaatcctttaccaagatatatcatctcaaaattca
ttagagaatacttagagaagacaaacttttcaaatatattgtaggtatga
atccttttccttttggcctagttcctagactgtaacagtgaatacttaca
ggctagaaacttaactcatgcattgtatgaagaaatagctttgacttcat
ttcaggtcagagaggaacatctaaggatcttttttagggtaaagtatttc
tgttagggaaaatgttgttattcttgacaacactggaggctccacactag
agaattagtatgattatgaaaatccttgtcaaaactttcatgtcaatgtt
caattctagataatgtttacttattttatgtttgggagaacttctggaat
atggtgaaatgtagaaagcttttcatgaccctttttaactttgtcaccct
cacgttaaggatgaagaataggttagga
gaattctaaaagagatggagttccagttgatcttgtcttttcaactgtgt
tacatcaaaaaagttgctagccaaagtggtttcataaaaatatccaaaga
ctgctggccactgacaacaaaaggggttgcttttcacaaactgacaataa
gtcttcattgctaaagacagggctgacacaaaacactgtatatgaaaagg
gcaaactggtgcctgcaagaacattgactcttatgttccagtgtcctcct
tatggaaggtgctttgaaaggtacacaaagtgaaatatatacatagaacc
aaccaaaaagacgttgatctataatttttcctttcagcaaaatatgctta
gggcaatgatgtcatgaatttactgagaataaccaatcaatgtctaattt
gacttaaataccaaaagcactctggttaaatgttatatatctatatacac
aagggtgcttggtcatgagtgtactgggagtgtttgtggacacaccagtg
ttataagtaatgaaaaggtttctatatactataaagcataaaactttcat
tggagcagtctcccagctatcagatttaagacaattcaagcctatgacct
catacatagatacctcttaacctctctcctgctccgttctcatctatctg
ttctcttctctgtctcccactaaatctcctacatctgcattctcctctct
acatctcttttaatattcagaaattcggccctccaattcttgtaccagga
attggatgtcaggttttttcttagaagcaatcaggtgtgaaacatcacca
gaactttctctggattgcctcaaggcttagagagctgctttgctattcat
ttatctcagcaggggtgagaggagtatttacaaatgttaaagctggtgat
gggccatagaaatgacaatatcaagattcctgctagttctctgccataaa
aatttgaaaattacagacacactcactgaaaagattgaaatttcaccttc
aatacatgttggagaaatctcagcaagccagaagaggcaatttggggcca
acaggttggaatgtcacttgatgtagaactagtctgacct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_146364571_146365413
seq2: B6Ng01-205G12.b_377_1228

seq1  ATTCATCAGAGAATTCATACAGGAGAGAGACCTTACAAATGTCGTGAATG  50
      |||||||||||||||||||||||| ||| ||||||||||||| |||||||
seq2  ATTCATCAGAGAATTCATACAGGAAAGAAACCTTACAAATGTAGTGAATG  50

seq1  TGACAAATGCTTTTCCCGAAAATTCCATCTTGGTATTCATCAGAGAATTC  100
      ||||||||||||| ||| ||||| |  ||||  |||||||||||||||||
seq2  TGACAAATGCTTTACCCAAAAATCCTGTCTTAATATTCATCAGAGAATTC  100

seq1  ATACAGGAAAGAAACCTTACAAATGTAGTGAATGTGACAAATGCTTTACT  150
      || ||||| |||||||||||||||| ||||||||||||||||||||||||
seq2  ATGCAGGAGAGAAACCTTACAAATGCAGTGAATGTGACAAATGCTTTACT  150

seq1  ACAAAAGGCAATCTGATAATTCATCAGAGAATTCATACAAGAGAGAAACC  200
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  ACAAAAGGCAATCTGATAATTCATCAGAGAATTCATACAGGAGAGAAACC  200

seq1  TCACAAATGTAGTGAATGTGACAAATGCTTTACCCAGAAATCCCATCTTA  250
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAATGTAGTGAATGTGACAAATGCTTTACCCAGAAATCCCATCTTA  250

seq1  GTATTCATCAGAAAATTCATACAGGAGAGAAACCTTACAAATAGATTGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTCATCAGAAAATTCATACAGGAGAGAAACCTTACAAATAGATTGTA  300

seq1  TGTGACAAATACAATACTCACAATGTCAGTCTTAGAAATCATCAGTTATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACAAATACAATACTCACAATGTCAGTCTTAGAAATCATCAGTTATT  350

seq1  TCATACAGTAGAGAATCTTTATAAATGAAGTGAACGAGACAATCCTTTAC  400
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TCATACAGTAGAGAATCTTTATAAATGAAGTGAATGAGACAATCCTTTAC  400

seq1  CAAGATATATCATCTCAAAATTCATTAGAGAATACTTAGAGAAGACAAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATATATCATCTCAAAATTCATTAGAGAATACTTAGAGAAGACAAAC  450

seq1  TTTTCAAATATATTGTAGGTATGAATCC-TTTCCTTTTGGCCTATTTCCT  499
      |||||||||||||||||||||||||||| ||||||||||||||| |||||
seq2  TTTTCAAATATATTGTAGGTATGAATCCTTTTCCTTTTGGCCTAGTTCCT  500

seq1  AGACTGTAACAGTGAATACTTACAGGCTAGAAACTTAACTCATGCATTGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGTAACAGTGAATACTTACAGGCTAGAAACTTAACTCATGCATTGT  550

seq1  ATGAAGAAATATCTTTGACTTCATTTCAGGTCAGAGA-GAACATCTAAGA  598
      ||||||||||| ||||||||||||||||||||||||| ||||||||||| 
seq2  ATGAAGAAATAGCTTTGACTTCATTTCAGGTCAGAGAGGAACATCTAAGG  600

seq1  A--CTTTTTAGGGTAAAGAATTT-TGTTGGGGAAAATGTTG-TATTCTTG  644
      |   |||||||||||||| |||| |||| |||||||||||| ||||||||
seq2  ATCTTTTTTAGGGTAAAGTATTTCTGTTAGGGAAAATGTTGTTATTCTTG  650

seq1  ACAACACTTGAGGCTCCACACTAGAGAATTAGTATGATTATGAAAAT-CT  693
      |||||||| |||||||||||||||||||||||||||||||||||||| ||
seq2  ACAACACTGGAGGCTCCACACTAGAGAATTAGTATGATTATGAAAATCCT  700

seq1  TGTGAAAATATTCATG-CAATGTTCAAATCTTAGATAATGTCAACT--AT  740
      ||| ||||  |||||| |||||||||| || ||||||||||  |||   |
seq2  TGTCAAAACTTTCATGTCAATGTTCAATTC-TAGATAATGTTTACTTATT  749

seq1  TTATG-TTGGGAGAAACTCT-GAAAATGTGAAAATGTAGAAAGCTTTTCA  788
      ||||| |||||||||  ||| ||| |||   |||||||||||||||||||
seq2  TTATGTTTGGGAGAACTTCTGGAATATGGTGAAATGTAGAAAGCTTTTCA  799

seq1  TGACACCTTTTTACTTGTTCACCCTCAAACGTTATAAGATGAAG-ATAAG  837
      |||| | |||| ||||  ||||||||  |||||| | ||||||| ||| |
seq2  TGACCCTTTTTAACTTTGTCACCCTC--ACGTTA-AGGATGAAGAATAGG  846

seq1  TTAGGA  843
      ||||||
seq2  TTAGGA  852

seq1: chr4_145589751_145590838
seq2: B6Ng01-205G12.g_69_1158

seq1  GAATTCTGAAAGAGATGGAGTTCCAGTTGATCTTGTCTTTTCCACTGTGT  50
      ||||||| |||||||||||||||||||||||||||||||||| |||||||
seq2  GAATTCTAAAAGAGATGGAGTTCCAGTTGATCTTGTCTTTTCAACTGTGT  50

seq1  TACATCAAGAAAGTTGCTAGCCAAAGTGGTTTCATAAAAATATCCAAAGA  100
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TACATCAAAAAAGTTGCTAGCCAAAGTGGTTTCATAAAAATATCCAAAGA  100

seq1  CTGCTGGCCACTGACAACAAAAGGGGTTGCTTTTAACAAACTGACAATAA  150
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CTGCTGGCCACTGACAACAAAAGGGGTTGCTTTTCACAAACTGACAATAA  150

seq1  GTCTTCATTGCTAAAGACAGGGCTGACACAAAACACTGTATATGAAAAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCATTGCTAAAGACAGGGCTGACACAAAACACTGTATATGAAAAGG  200

seq1  GCAAACTGGTGCCTGCAAGAACATTGACTCTTATGTTCCAGTGTCCTCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAACTGGTGCCTGCAAGAACATTGACTCTTATGTTCCAGTGTCCTCCT  250

seq1  TATGGAAGGTGCTTTGAAAGGTACACAAAGTGAAATATATACACAGAACC  300
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TATGGAAGGTGCTTTGAAAGGTACACAAAGTGAAATATATACATAGAACC  300

seq1  AACCAAAAAGACGTTGATCTATAATTTTTCCTTTCAGCAAAATATGCTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAAAAGACGTTGATCTATAATTTTTCCTTTCAGCAAAATATGCTTA  350

seq1  GGGCAATGATGTCATGAATTTACTGGGAATAACCAATCAATGTCTAATTT  400
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GGGCAATGATGTCATGAATTTACTGAGAATAACCAATCAATGTCTAATTT  400

seq1  GACTTAAATACCAAAAGCACTCTGGTTAAATGTAATATATCTATACACAC  450
      ||||||||||||||||||||||||||||||||| ||||||||||| ||||
seq2  GACTTAAATACCAAAAGCACTCTGGTTAAATGTTATATATCTATATACAC  450

seq1  AAGGGTGCTTGGTCATGAGTGTACTGGGAGTGTTTGTGGACACACCAGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGTGCTTGGTCATGAGTGTACTGGGAGTGTTTGTGGACACACCAGTG  500

seq1  TTATAAGTAATGAAAAGGTTTCTATATACTATAAAGCATAAAACTTTCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAGTAATGAAAAGGTTTCTATATACTATAAAGCATAAAACTTTCAT  550

seq1  TGGAGCAGTCTCCCAGCTATCATTTAGATTTAAGACAATTCAAGCCTATG  600
      |||||||||||||||||||||    |||||||||||||||||||||||||
seq2  TGGAGCAGTCTCCCAGCTATC----AGATTTAAGACAATTCAAGCCTATG  596

seq1  ACCTCATACATAGATACCTCTTAACCTCTCTCCCGCTCCGTTCTCATCTA  650
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  ACCTCATACATAGATACCTCTTAACCTCTCTCCTGCTCCGTTCTCATCTA  646

seq1  TCTGTTATCTTCTCTGTCTCCCACTAAATCTCCTACATCTGCATTCTCCT  700
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTCTCTTCTCTGTCTCCCACTAAATCTCCTACATCTGCATTCTCCT  696

seq1  CTCTACATCTCTTTTAATATCCAGAAATTCGGCCCTCCAATTCTTGTCCC  750
      |||||||||||||||||||| |||||||||||||||||||||||||| ||
seq2  CTCTACATCTCTTTTAATATTCAGAAATTCGGCCCTCCAATTCTTGTACC  746

seq1  AGGAATTGGATGTCAGGTTTTTTTCTTAGAAGCAATCAGGTGTGAAACAT  800
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AGGAATTGGATGTCAGG-TTTTTTCTTAGAAGCAATCAGGTGTGAAACAT  795

seq1  CACCAGAAC-TTCTCTGGATTGCCTTTAGGTATAGAGAGCTGC-TTGCCA  848
      ||||||||| |||||||||||||||  |||  ||||||||||| |||| |
seq2  CACCAGAACTTTCTCTGGATTGCCTCAAGGCTTAGAGAGCTGCTTTGCTA  845

seq1  TTCAAGTATCTCAGCAGGGGTGGGAGGAGTATTTACAAATG-TAAAGCTG  897
      ||||  |||||||||||||||| |||||||||||||||||| ||||||||
seq2  TTCATTTATCTCAGCAGGGGTGAGAGGAGTATTTACAAATGTTAAAGCTG  895

seq1  GTGATGGGCCATAGAAATGACAATATCAAGA-TCCTGCTAGTTCTCTGCC  946
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GTGATGGGCCATAGAAATGACAATATCAAGATTCCTGCTAGTTCTCTGCC  945

seq1  AATAAAAATTTGAAAA-TACAGACACACCCACTGAAAAGGTTAGGAAATT  995
       ||||||||||||||| ||||||||||| |||||||||| || | || ||
seq2  -ATAAAAATTTGAAAATTACAGACACACTCACTGAAAAGATT-GAAATTT  993

seq1  CACC-TCCATACATG-TGGAG-AATCCAAGTAGGCCAGAAGAGG-AAATT  1041
      |||| || ||||||| ||||| ||||  || | ||||||||||| || ||
seq2  CACCTTCAATACATGTTGGAGAAATCTCAGCAAGCCAGAAGAGGCAATTT  1043

seq1  GGGGCCCACAGGTTGGAATGTCACTTTGATGTAG-ACTAGTCTGACCT  1088
      |||||| ||||||||||||||||| ||||||||| |||||||||||||
seq2  GGGGCCAACAGGTTGGAATGTCAC-TTGATGTAGAACTAGTCTGACCT  1090