BAC Information

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BAC

Clone NameB6Ng01-205M18
Chromosome4 (Build37)
Map Location 110,406,731 - 110,407,764
singlet/doubletsinglet
Overlap genenone
Upstream geneFaf1, Dmrta2, Elavl4
Downstream geneLOC100040381, 2310026E23Rik, Spata6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-205M18.bB6Ng01-205M18.g
ACCGA025381GA025382
length1,2191,108
definitionB6Ng01-205M18.b B6Ng01-205M18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcaactgaggaattcgaatggatgagaagcacctgaaaaaaatg
ttcaatgtccttaatcatcagggaaatgcaaattaaaaccaccctgagat
ttcacctcacaccagtcagaatggctaagatcaaaaattcagttgacagc
agatgctggtgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctgccggttcctca
gaaaattggacatagtactactggaagatccagcaatacctctcctgggc
atatacccagaaaatgttccaacttgtaataaacacgcatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccgatg
tccctcaacagaggaatggattcagaaaatgtaatacatttacacaatgg
agtattactcagcaattaaaaacaatgaatttatgaaattcttgggcaaa
tggattgatctggtggatatcattctgagtgaggtaacccaatcacaaaa
gaacacacataatatgcactcactgataagtggatattaacccagaaact
tagaatgcctgagatacaatttacaaaatacataaaactcaagaagaagg
aagaccaaagtgtggatgcatttggcctaatgtcttaactttgaagagga
agaaacacagattttttctgttttcgttttcagcttttctcatttctaga
tttgtcttttacatcctatctttttaaccacaatcttggttcatattcat
cgtgtgtgttgcttttctctttggtttcccttcctagtttaatcccatcc
cctgccactttctagcttagttccttctacccaagacatttcatctctgt
caaggatttactattgtaatgtaattttgttttcctaaatataagggtta
agcattaaattcttttacatatcctcctatgttcttctatgactttcctt
gaaatccttctttaggaactatcctgccactttacatttctcggcatgct
tgtcttcctgggtgattcatctttgcctgtcacacggtaatgcaccacac
acttaccaatgccaggtgaatcttgtgctgaataggacacatatttaatt
acgagatttagccaaaagtaattaagctttctgtaactggactgaaacag
agttttacaaagtgtttgc

gaattctgttagaggctagaaaaattatccagggagctgacagtcagtct
atatgagattccctttgactcaccccagttgggactacaacatgccagaa
ggtagggagagcttgaaaatctattgccaggctctggtggcgggtctccg
aggtgcctcaacacagtccactaatttgtctaaggtaagagaaggtataa
tacaagagggagagagttacatgatctagtgaaggaggcagaagagagag
agtggcaggaagcagaagaaagagacaggacctagacagatagggaacct
gggcaacagaagacgaatctgcttaacagaattaggtgagttggggtact
tagcctcagctaaaaaagactcagctgtgtcagactgaagttacttattt
ggggatacaccctttgatatggacggtggctaaaagaacccccccccaaa
aaaaagactaactcagatccccaccccaactacaccaaggcaagtagact
tcttgggcactgctggcttatgcaggctctggatacctgggtttgcaacc
atagctgccccattgaaccccctaaccaaggaaggggaggtgtttgtgtg
gaccccagaaagcctttaaagaaattaaaaaggccctactaatggcccta
gccttggccttgcctgacctaagactttgggaccttggaaaaggccagtg
gcttaagttagaccctgttgccagcaggtggttttcttgcctgaaagcta
ttgctgccatagctctactcgtcaaggatgctgataaagatcagccttgg
cctgggagtctgagctggtacacagatggcagttaacttcatggttgaaa
gtaagcggaaggcggggtcagcagtggtggacagaagcaagtgatctggg
ccagcagcctccctaaagggacatcaagcccagaaaacaaacttgtggct
ttgaataaagtaaaaactttgcattactggggactattgatgcctggtta
gttggagctagaaatggagtagtgattaagaagaagaccagcatcattga
gggtgaactcgttctgggtagtggttttctgagaaccacagaaggccatg
gtttccca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_110406731_110407764
seq2: B6Ng01-205M18.b_221_1267

seq1  AAAGAGGAACACTCCTCCATTGTTGGTGGGATTGCAAGCTTGTACAACCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGGAACACTCCTCCATTGTTGGTGGGATTGCAAGCTTGTACAACCA  50

seq1  CTCTGGAAATCAGTCTGCCGGTTCCTCAGAAAATTGGACATAGTACTACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGAAATCAGTCTGCCGGTTCCTCAGAAAATTGGACATAGTACTACT  100

seq1  GGAAGATCCAGCAATACCTCTCCTGGGCATATACCCAGAAAATGTTCCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGATCCAGCAATACCTCTCCTGGGCATATACCCAGAAAATGTTCCAA  150

seq1  CTTGTAATAAACACGCATGCTCCACTATGTTCATAGCAGCCTTATTTATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTAATAAACACGCATGCTCCACTATGTTCATAGCAGCCTTATTTATA  200

seq1  ATAGCCAGAAGCTGGAAAGAACCCGATGTCCCTCAACAGAGGAATGGATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCCAGAAGCTGGAAAGAACCCGATGTCCCTCAACAGAGGAATGGATT  250

seq1  CAGAAAATGTAATACATTTACACAATGGAGTATTACTCAGCAATTAAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAATGTAATACATTTACACAATGGAGTATTACTCAGCAATTAAAAA  300

seq1  CAATGAATTTATGAAATTCTTGGGCAAATGGATTGATCTGGTGGATATCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGAATTTATGAAATTCTTGGGCAAATGGATTGATCTGGTGGATATCA  350

seq1  TTCTGAGTGAGGTAACCCAATCACAAAAGAACACACATAATATGCACTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAGTGAGGTAACCCAATCACAAAAGAACACACATAATATGCACTCA  400

seq1  CTGATAAGTGGATATTAACCCAGAAACTTAGAATGCCTGAGATACAATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATAAGTGGATATTAACCCAGAAACTTAGAATGCCTGAGATACAATTT  450

seq1  ACAAAATACATAAAACTCAAGAAGAAGGAAGACCAAAGTGTGGATGCATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAATACATAAAACTCAAGAAGAAGGAAGACCAAAGTGTGGATGCATT  500

seq1  TGGCCTAATGTCTTAACTTTGAAGAGGAAGAAACACAGATTTTTTCTGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTAATGTCTTAACTTTGAAGAGGAAGAAACACAGATTTTTTCTGTT  550

seq1  TTCGTTTTCAGCTTTTCTCATTTCTAGATTTGTCTTTTACATCCTATCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGTTTTCAGCTTTTCTCATTTCTAGATTTGTCTTTTACATCCTATCTT  600

seq1  TTTAACCACAATCTTGGTTCATATTCATCGTGTGTGTTGCTTTTCTCTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACCACAATCTTGGTTCATATTCATCGTGTGTGTTGCTTTTCTCTTT  650

seq1  GGTTT-CCTTCCTAGTTTAATCCCATCCCCTGCCACTTTCTAGCTTAGTT  699
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTCCCTTCCTAGTTTAATCCCATCCCCTGCCACTTTCTAGCTTAGTT  700

seq1  CCTTCTACCCAAGACATTTCATCTCTGTC-AGGATTTACTATTGT-ATGT  747
      ||||||||||||||||||||||||||||| ||||||||||||||| ||||
seq2  CCTTCTACCCAAGACATTTCATCTCTGTCAAGGATTTACTATTGTAATGT  750

seq1  AATTTTGTTTTCCT-AATATAA-GGTTTAGCA-TAAATTCTTTTACATAT  794
      |||||||||||||| ||||||| |||| |||| |||||||||||||||||
seq2  AATTTTGTTTTCCTAAATATAAGGGTTAAGCATTAAATTCTTTTACATAT  800

seq1  CCTCCTATGTTCTTCTATGACTTTCCTTTGAAATCC-TCTTTAGGAACTA  843
      |||||||||||||||||||||||||| ||||||||| |||||||||||||
seq2  CCTCCTATGTTCTTCTATGACTTTCC-TTGAAATCCTTCTTTAGGAACTA  849

seq1  TCCTGCCACTTTACATTTCTCGGCATGC-TGTCT--CTGGGTGATTCATC  890
      |||||||||||||||||||||||||||| |||||  ||||||||||||||
seq2  TCCTGCCACTTTACATTTCTCGGCATGCTTGTCTTCCTGGGTGATTCATC  899

seq1  TTTGCCTGTCACACGGGTATGCACACCAACACCTACACATG-CAGGTGAA  939
      ||||||||||||||||  |||||| |  |||| |||  ||| ||||||||
seq2  TTTGCCTGTCACACGGTAATGCAC-CACACACTTACCAATGCCAGGTGAA  948

seq1  TC-TGTGCTG---ATGACATAT-TTTAATTAC-AGATTTAGTCAGAAGTA  983
      || |||||||   | |||| || ||||||||| |||||||| || |||||
seq2  TCTTGTGCTGAATAGGACACATATTTAATTACGAGATTTAGCCAAAAGTA  998

seq1  ATTAAGTCTTTCTGTAACATGGACTGGAACAGAGTTTTTAAAAATGTTTG  1033
      |||||| ||||||||||| ||||||| |||||||||||  ||| ||||||
seq2  ATTAAG-CTTTCTGTAAC-TGGACTGAAACAGAGTTTTACAAAGTGTTTG  1046

seq1  C  1034
      |
seq2  C  1047


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