BAC Information

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BAC

Clone NameB6Ng01-206P12
Chromosome4 (Build37)
Map Location 68,701,503 - 68,716,096
singlet/doubletdoublet
Overlap genenone
Upstream geneTcp1-ps1, Dbc1
Downstream geneLOC622491, LOC433716, LOC100039888, LOC242497, LOC671064
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-206P12.bB6Ng01-206P12.g
ACCGA026244GA026245
length9951,127
definitionB6Ng01-206P12.b B6Ng01-206P12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(68,701,503 - 68,702,492)(68,714,960 - 68,716,096)
sequence
gaattctctacatttatcatttctttttcttccaaggtgttgtactattc
tgagcaccttgtatttacttcaagctttaaaatcatgtcaatctctaaag
caatcaagtaggatatatatttgttttaacttctagaaggccatgattat
tgtctttaatttattcttcattttagtagttttaatcctctccttttaaa
ataatttttaaaaatttgttcatcaattcaaagagctaaatattttcttt
gcttaattttactaatttttattttgtatttcatttgttccctctgtaat
cattgctatattcccacttctattactttggattacgtttatttatgtcg
gagggtttatagttacgtggcttatttactgtgaattacttatttacaga
caccaacataataattattatttacatactaataccactcttattgaaca
cctattggattagaaatttacatacattattactaaattcctgagaagct
ctaatgataaacatacttatcttcattttatatatgagaaaatcaagatt
ttgaattagtcaaggtgccatagaatatatatgaatttcatgcagttctt
tgtgatcaaaattggagctgcatctattcctgcagagaagggtcaagtaa
agactatgaaattgtgagtcacatatttgactaaatgaaacaaacaaaca
aaaaagggggggggggagagagcgagagcgagagagagagagagagagag
agagagagagagagagagagagagaactatctaaactatctaaacctcag
cttcctcatttcaggatagccagttctaactcctagggttgtttttctgt
cactattttgggagcattttctgaaccattctcttaaagggaaaactttt
cctcatccaccttagtcctcagacttcatcaaatctaatcactaagcatg
tttgtttaatctgccaccctatacttgcttattatagaccaggtt

gaattctttgctcaatgctgacagaaagacctattttacttgcactcttt
tcaatgatgcagtctgcttgtaattgttattaagattgctgttatggttt
taaaactggcaaaatataaacatcacagagcaaatgctcattgtattcct
tccctcctttttctagtaccattgcaagctccatgcctccttaaagagtc
ttagctcttcttgttccttgcctctcattgtcttgataacctgatgagct
tctctgtaacaaagaacaacccagtcatcaagccccctttccctttcaat
tcaatggctccggctctcatttttattgtcttgaattcttacctccttgg
gcccaacaattgcttggttgaaagtatattctccattattccctaagcca
ttgcattttctttatgaaaactctgtacaaataaaggattcattttggtt
gatctcacctaaacagtggaccgaagtgaaacaaatacaactaaatctgg
aaagagttcttaagaagaagaggaaggccagattaaaaggtcaaaatgtg
ctacactgagctagaatgtccacctaagttaaatgatcttctgggcttct
agaagcaccttgtatctttttaaaatttatttttcattacccactatgta
gttttttatttaatggctccaaaatagctgcttctctctaggtattttat
accacctcccaacttcagtatgaatgctgaaatcagattcaaacaaatat
agccaggttaactgtgattactgtttccccaacatttagataacatcgtg
gcacaatgtcagagtgatcagcatttccactgtttgtttgtttgtttgtt
tgtttgtttgtttgtttgacaaaatgttcaaattcttagagcaagacaca
tgacttaacatataaatatttataaatctaataccattgatgtctaaata
tgaataatatgtaatgtgagtgttcttgccttaaaaactagtaatttaag
tggtgaagttcccttatgtttattgccaaatagccaatcacatgaaaaat
gcagtgtagtatgataaaaatggagatatgtcagataatcaaggttatga
tatatgaatccattcaattgccttgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_68701503_68702492
seq2: B6Ng01-206P12.b_44_1038

seq1  GAATTCTCTACATTTATCATTTCTTTTTCTTCCAAGGTGTTGTACTATTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTACATTTATCATTTCTTTTTCTTCCAAGGTGTTGTACTATTC  50

seq1  TGAGCACCTTGTATTTACTTCAAGCTTTAAAATCATGTCAATCTCTAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCACCTTGTATTTACTTCAAGCTTTAAAATCATGTCAATCTCTAAAG  100

seq1  CAATCAAGTAGGATATATATTTGTTTTAACTTCTAGAAGGCCATGATTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCAAGTAGGATATATATTTGTTTTAACTTCTAGAAGGCCATGATTAT  150

seq1  TGTCTTTAATTTATTCTTCATTTTAGTAGTTTTAATCCTCTCCTTTTAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTTAATTTATTCTTCATTTTAGTAGTTTTAATCCTCTCCTTTTAAA  200

seq1  ATAATTTTTAAAAATTTGTTCATCAATTCAAAGAGCTAAATATTTTCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTTTTAAAAATTTGTTCATCAATTCAAAGAGCTAAATATTTTCTTT  250

seq1  GCTTAATTTTACTAATTTTTATTTTGTATTTCATTTGTTCCCTCTGTAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAATTTTACTAATTTTTATTTTGTATTTCATTTGTTCCCTCTGTAAT  300

seq1  CATTGCTATATTCCCACTTCTATTACTTTGGATTACGTTTATTTATGTCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCTATATTCCCACTTCTATTACTTTGGATTACGTTTATTTATGTCG  350

seq1  GAGGGTTTATAGTTACGTGGCTTATTTACTGTGAATTACTTATTTACAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGTTTATAGTTACGTGGCTTATTTACTGTGAATTACTTATTTACAGA  400

seq1  CACCAACATAATAATTATTATTTACATACTAATACCACTCTTATTGAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAACATAATAATTATTATTTACATACTAATACCACTCTTATTGAACA  450

seq1  CCTATTGGATTAGAAATTTACATACATTATTACTAAATTCCTGAGAAGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTGGATTAGAAATTTACATACATTATTACTAAATTCCTGAGAAGCT  500

seq1  CTAATGATAAACATACTTATCTTCATTTTATATATGAGAAAATCAAGATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGATAAACATACTTATCTTCATTTTATATATGAGAAAATCAAGATT  550

seq1  TTGAATTAGTCAAGGTGCCATAGAATATATATGAATTTCATGCAGTTCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATTAGTCAAGGTGCCATAGAATATATATGAATTTCATGCAGTTCTT  600

seq1  TGTGATCAAAATTGGAGCTGCATCTATTCCTGCAGAGAAGGGTCAAGTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATCAAAATTGGAGCTGCATCTATTCCTGCAGAGAAGGGTCAAGTAA  650

seq1  AGACTATGAAATTGTGAGTCACATATTTGACTAAATGAAACAAACAAACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTATGAAATTGTGAGTCACATATTTGACTAAATGAAACAAACAAACA  700

seq1  AAAAAGGGGGGGGGGGAGAGAGCGAGAGCGAGAGAGAGAGAGAGAGAGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGGGGGGGGGGGAGAGAGCGAGAGCGAGAGAGAGAGAGAGAGAGAG  750

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAACTATCTAAACTATCTAAACCTCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAACTATCTAAACTATCTAAACCTCAG  800

seq1  CTTCCTCATTTCAGGATAGCCAGTTCTAACTCCTAGGGTTG-GTTTCTGT  849
      |||||||||||||||||||||||||||||||||||||||||  |||||||
seq2  CTTCCTCATTTCAGGATAGCCAGTTCTAACTCCTAGGGTTGTTTTTCTGT  850

seq1  CACTATTTTGGGAGCATTTTCTGAA-CATTCTTCTTAAGGGAAAAC-TTT  897
      ||||||||||||||||||||||||| ||||||  | |||||||||| |||
seq2  CACTATTTTGGGAGCATTTTCTGAACCATTCTCTTAAAGGGAAAACTTTT  900

seq1  CCTCAT-CACCTTAGTCCTCAGACTCCATCAAATCTAATCACTTAGCATG  946
      |||||| |||||||||||||||||| ||||||||||||||||| ||||||
seq2  CCTCATCCACCTTAGTCCTCAGACTTCATCAAATCTAATCACTAAGCATG  950

seq1  TTTG-TTAATCTGCTACCATATACTTGCTTATTTATAGA-CAGGTT  990
      |||| ||||||||| ||| |||||||||||| ||||||| ||||||
seq2  TTTGTTTAATCTGCCACCCTATACTTGCTTA-TTATAGACCAGGTT  995


seq1: chr4_68714960_68716096
seq2: B6Ng01-206P12.g_68_1194 (reverse)

seq1  TGCAAGCAAATTGAATGTGATTCATATATCATAACCTTTGATTTATCCCT  50
      ||||||  ||||||||| |||||||||||||||||| |||| ||||  ||
seq2  TGCAAGGCAATTGAATG-GATTCATATATCATAACC-TTGA-TTAT--CT  45

seq1  GACATAATTCTTCCCATTTTTATCATACTACACTGCATTTTTTCATGTGA  100
      ||||||  |||  |||||||||||||||||||||||| ||||||||||||
seq2  GACATA--TCT--CCATTTTTATCATACTACACTGCA-TTTTTCATGTGA  90

seq1  TTTGGCTATTTTGCAATAAACATAA-GGAACTTCA-CAC-TAAATTACTA  147
       |||||||||| ||||||||||||| ||||||||| ||| ||||||||||
seq2  -TTGGCTATTTGGCAATAAACATAAGGGAACTTCACCACTTAAATTACTA  139

seq1  GTTTTTAAGGCAAGAACACTCACATTACATATTATTCATATTTTAGACAT  197
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GTTTTTAAGGCAAGAACACTCACATTACATATTATTCATA-TTTAGACAT  188

seq1  CAATGGTATTAGATTTATAAATATTTATATGTTAAGTCATGTGTCTTGCT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGTATTAGATTTATAAATATTTATATGTTAAGTCATGTGTCTTGCT  238

seq1  CTAAGAATTTGAACATTTTGTCAAAACAAACAAACAAACAAACAAACAAA  297
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CTAAGAATTTGAACATTTTGTC-AAACAAACAAACAAACAAACAAACAAA  287

seq1  CAAACAAACAGTGGAAATGCTGATCACTCTGACATTGTGCCACGATGTTA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAAACAGTGGAAATGCTGATCACTCTGACATTGTGCCACGATGTTA  337

seq1  TCTAAATGTTGGGGAAACAGTAATCACAGTTAACCTGGCTATATTTGTTT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAATGTTGGGGAAACAGTAATCACAGTTAACCTGGCTATATTTGTTT  387

seq1  GAATCTGATTTCAGCATTCATACTGAAGTTGGGAGGTGGTATAAAATACC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTGATTTCAGCATTCATACTGAAGTTGGGAGGTGGTATAAAATACC  437

seq1  TAGAGAGAAGCAGCTATTTTGGAGCCATTAAATAAAAAACTACATAGTGG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGAGAAGCAGCTATTTTGGAGCCATTAAATAAAAAACTACATAGTGG  487

seq1  GTAATGAAAAATAAATTTTAAAAAGATACAAGGTGCTTCTAGAAGCCCAG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATGAAAAATAAATTTTAAAAAGATACAAGGTGCTTCTAGAAGCCCAG  537

seq1  AAGATCATTTAACTTAGGTGGACATTCTAGCTCAGTGTAGCACATTTTGA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATCATTTAACTTAGGTGGACATTCTAGCTCAGTGTAGCACATTTTGA  587

seq1  CCTTTTAATCTGGCCTTCCTCTTCTTCTTAAGAACTCTTTCCAGATTTAG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTAATCTGGCCTTCCTCTTCTTCTTAAGAACTCTTTCCAGATTTAG  637

seq1  TTGTATTTGTTTCACTTCGGTCCACTGTTTAGGTGAGATCAACCAAAATG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATTTGTTTCACTTCGGTCCACTGTTTAGGTGAGATCAACCAAAATG  687

seq1  AATCCTTTATTTGTACAGAGTTTTCATAAAGAAAATGCAATGGCTTAGGG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTTTATTTGTACAGAGTTTTCATAAAGAAAATGCAATGGCTTAGGG  737

seq1  AATAATGGAGAATATACTTTCAACCAAGCAATTGTTGGGCCCAAGGAGGT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATGGAGAATATACTTTCAACCAAGCAATTGTTGGGCCCAAGGAGGT  787

seq1  AAGAATTCAAGACAATAAAAATGAGAGCCGGAGCCATTGAATTGAAAGGG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATTCAAGACAATAAAAATGAGAGCCGGAGCCATTGAATTGAAAGGG  837

seq1  AAAGGGGGCTTGATGACTGGGTTGTTCTTTGTTACAGAGAAGCTCATCAG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGGGCTTGATGACTGGGTTGTTCTTTGTTACAGAGAAGCTCATCAG  887

seq1  GTTATCAAGACAATGAGAGGCAAGGAACAAGAAGAGCTAAGACTCTTTAA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATCAAGACAATGAGAGGCAAGGAACAAGAAGAGCTAAGACTCTTTAA  937

seq1  GGAGGCATGGAGCTTGCAATGGTACTAGAAAAAGGAGGGAAGGAATACAA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCATGGAGCTTGCAATGGTACTAGAAAAAGGAGGGAAGGAATACAA  987

seq1  TGAGCATTTGCTCTGTGATGTTTATATTTTGCCAGTTTTAAAACCATAAC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCATTTGCTCTGTGATGTTTATATTTTGCCAGTTTTAAAACCATAAC  1037

seq1  AGCAATCTTAATAACAATTACAAGCAGACTGCATCATTGAAAAGAGTGCA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATCTTAATAACAATTACAAGCAGACTGCATCATTGAAAAGAGTGCA  1087

seq1  AGTAAAATAGGTCTTTCTGTCAGCATTGAGCAAAGAATTC  1137
      ||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAAATAGGTCTTTCTGTCAGCATTGAGCAAAGAATTC  1127


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