BAC Information

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BAC

Clone NameB6Ng01-207D21
Chromosome4 (Build37)
Map Location 7,460,007 - 7,569,967
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100039414, Tox, LOC100039421, LOC666700
Downstream geneCar8, LOC100039494, LOC100039505, LOC100039478, Rab2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-207D21.bB6Ng01-207D21.g
ACCGA026451GA026452
length1,209923
definitionB6Ng01-207D21.b B6Ng01-207D21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,568,770 - 7,569,967)(7,460,007 - 7,460,927)
sequence
gaattcaaaattgtgttcttattaattcagtgatgcagcactaaacaagt
gcctattgtcatgagattttacttttaggaaatgcattttaatcttttga
aaaaacatatcaagatttttgttctgcacatgtttctcttcattgatttg
agtagttctttatggattgtattaaacaatccagttctatgtgtagcact
catttaatttggtgcagacatatacttgttcttttgggttttcatttaaa
aacatcatggttttcaacaaatataactatatatatatcaaaatgtgctt
ttcttcctttaatctttgctcatttatcattataatttgcacaatgaaac
tatttaacttgattttgctagagcagaaattacaactagaatgaatgagt
gttatttaaaaactatctttacttctcttatgtttccttgttctttaata
taggaaaaagaaaaggacgctttcccaacaactcctgtttgctagaattc
tttcttgtacaaaagactgaatagtttagatcttagtgtctcccaaatgg
cctgtgtgttcatgggctaactttcagatttttatcatagaaatgtaaaa
aatgtagggtgctaaaagtgctaaaagtgtagggtaaaacctcaggtatg
gtcttgtggtcattgtggagataccctttataggtatggtaggaccctgg
aactgcttctctctctctcttgaagctaatagatttcctccactaaacac
cttggactatgatgcacagccacagcacagaccaaccactggccaaattg
tccaaacctatgaaaaaaaaaataaacatctccctttatctacctccttg
taaatttacattttaaaaatattttgttatattaacagaaacccaaaaca
aagtttaattcttttctttttacattagatgcaaaaaaaaaaaaatccct
gaaaatacgttttgataaaattttgaagatctttcaaatgataatttgat
gagttgggaaaagaagaatatgatttctggttttacattttttctcactt
tgagctccttggagcatcgagcacggtcagctctctcctagtgtgctgca
tttctttacctctatctgccctaataccttacctcttcaggtgccaccag
aacactgccgtttactgatgatgagacaggtcctagaaaagatgcccaga
aatttttaa

gaattccaggaacctagacaaagataaataagggagttatatattggtgt
tattactaccctcaaatttaggaaagaggagaaatgtatagagcttttca
gacatagtgatagaaaaaatgtgtggtttcagtcatgtatatcaacagaa
atatagttcttgctataaatcattttataatttctgagagtactggaaaa
ttgcaaaccctgctttctttatatgtcaccaaaatgccataattaagatt
aagtttctgctagggctgggagtacaagggcttcatggaagtacttgagg
tggagggaaagagggagggaagacagagttatggctttatttcactcaaa
agcatcaatgccacatgccatgctgtaacaatgtagtgtcccatcaagca
tcattgtttgggcaagattaatcctccaaatactggtgttgattctatat
tggatatttataatttatgctagttatttactacatgaaaatataaatat
ttagcgctgttgtggcatgggtaaatacaagagtttttgtggacaagtgt
ggaattttggccttattatacttttttctctaggaatcatctaatctttt
ttcaaactgtggcatgcttacttgttcaataaagataatcacaacctact
tcttatagtttgtgtcaaaaggaaaacagaattctttgtgtgaccattga
ttttgttattggtgagttacaaggtcacaaaatggccaaaagaatattta
taggcaaaaaggggtttttcactttttaaatgtggaaaggttctatttaa
agtgtagatacaaaaatatgaaaagctcttggtgatatcattgtaataac
acgtttttttccaaatgagtctggaaaaattataatgggggccattttat
ggccctatggaacttgtcctgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_7568770_7569967
seq2: B6Ng01-207D21.b_47_1255 (reverse)

seq1  TTAAAAA-TACTGTGCAATCTTTTCTAGGA-CTGTCTCATACATCAAGTA  48
      ||||||| | ||| || ||||||||||||| ||||||||| |||| ||||
seq2  TTAAAAATTTCTGGGC-ATCTTTTCTAGGACCTGTCTCAT-CATC-AGTA  47

seq1  AA-GGCAGTG-TCTGGTGGCA-CTGAAGA-GTAA-GTA-TAGGACAAGAT  92
      || ||||||| |||||||||| ||||||| |||| ||| |||| | ||||
seq2  AACGGCAGTGTTCTGGTGGCACCTGAAGAGGTAAGGTATTAGGGC-AGAT  96

seq1  AAGGAGGTAAAGAAATACAGCACACTA-GAGAGCCTTGA-CGTGCTCGAT  140
      |  ||||||||||||| |||||||||| |||||   ||| ||||||||||
seq2  A--GAGGTAAAGAAATGCAGCACACTAGGAGAGAGCTGACCGTGCTCGAT  144

seq1  GCTC--AGGAGCTCAAAGTGAAGAAAAATGTAAAA-CAGAAATCATATTC  187
      ||||  |||||||||||||||  |||||||||||| ||||||||||||||
seq2  GCTCCAAGGAGCTCAAAGTGAGAAAAAATGTAAAACCAGAAATCATATTC  194

seq1  -TCTTTTTCCAACTCATCAAAATTATCATTTGAAAGATC-TCAAAATTTT  235
       |||||| |||||||||| |||||||||||||||||||| ||||||||||
seq2  TTCTTTTCCCAACTCATC-AAATTATCATTTGAAAGATCTTCAAAATTTT  243

seq1  ATCAAAACGTATTTTCAGGGA-TTTTTTTTTTTTGCATCTAATGTAAAA-  283
      ||||||||||||||||||||| ||||||||||||||||||||||||||| 
seq2  ATCAAAACGTATTTTCAGGGATTTTTTTTTTTTTGCATCTAATGTAAAAA  293

seq1  -GAAAGAATTAAACTTTGTTTTGGGTTTCTGTTAATATAACAAAATATTT  332
        ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGAATTAAACTTTGTTTTGGGTTTCTGTTAATATAACAAAATATTT  343

seq1  TTAAAATGTAAATTTACAAGGAGGTAGATAAAGGGAGATGTTTATTTTTT  382
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATGTAAATTTACAAGGAGGTAGATAAAGGGAGATGTTTATTTTTT  393

seq1  TTTTCATAGGTTTGGACAATTTGGCCAGTGGTTGGTCTGTGCTGTGGCTG  432
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATAGGTTTGGACAATTTGGCCAGTGGTTGGTCTGTGCTGTGGCTG  443

seq1  TGCATCATAGTCCAAGGTGTTTAGTGGAGGAAATCTATTAGCTTCAAGAG  482
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCATAGTCCAAGGTGTTTAGTGGAGGAAATCTATTAGCTTCAAGAG  493

seq1  AGAGAGAGAAGCAGTTCCAGGGTCCTACCATACCTATAAAGGGTATCTCC  532
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAAGCAGTTCCAGGGTCCTACCATACCTATAAAGGGTATCTCC  543

seq1  ACAATGACCACAAGACCATACCTGAGGTTTTACCCTACACTTTTAGCACT  582
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGACCACAAGACCATACCTGAGGTTTTACCCTACACTTTTAGCACT  593

seq1  TTTAGCACCCTACATTTTTTACATTTCTATGATAAAAATCTGAAAGTTAG  632
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCACCCTACATTTTTTACATTTCTATGATAAAAATCTGAAAGTTAG  643

seq1  CCCATGAACACACAGGCCATTTGGGAGACACTAAGATCTAAACTATTCAG  682
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGAACACACAGGCCATTTGGGAGACACTAAGATCTAAACTATTCAG  693

seq1  TCTTTTGTACAAGAAAGAATTCTAGCAAACAGGAGTTGTTGGGAAAGCGT  732
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTGTACAAGAAAGAATTCTAGCAAACAGGAGTTGTTGGGAAAGCGT  743

seq1  CCTTTTCTTTTTCCTATATTAAAGAACAAGGAAACATAAGAGAAGTAAAG  782
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTCTTTTTCCTATATTAAAGAACAAGGAAACATAAGAGAAGTAAAG  793

seq1  ATAGTTTTTAAATAACACTCATTCATTCTAGTTGTAATTTCTGCTCTAGC  832
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTTTTAAATAACACTCATTCATTCTAGTTGTAATTTCTGCTCTAGC  843

seq1  AAAATCAAGTTAAATAGTTTCATTGTGCAAATTATAATGATAAATGAGCA  882
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCAAGTTAAATAGTTTCATTGTGCAAATTATAATGATAAATGAGCA  893

seq1  AAGATTAAAGGAAGAAAAGCACATTTTGATATATATATAGTTATATTTGT  932
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTAAAGGAAGAAAAGCACATTTTGATATATATATAGTTATATTTGT  943

seq1  TGAAAACCATGATGTTTTTAAATGAAAACCCAAAAGAACAAGTATATGTC  982
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAACCATGATGTTTTTAAATGAAAACCCAAAAGAACAAGTATATGTC  993

seq1  TGCACCAAATTAAATGAGTGCTACACATAGAACTGGATTGTTTAATACAA  1032
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACCAAATTAAATGAGTGCTACACATAGAACTGGATTGTTTAATACAA  1043

seq1  TCCATAAAGAACTACTCAAATCAATGAAGAGAAACATGTGCAGAACAAAA  1082
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATAAAGAACTACTCAAATCAATGAAGAGAAACATGTGCAGAACAAAA  1093

seq1  ATCTTGATATGTTTTTTCAAAAGATTAAAATGCATTTCCTAAAAGTAAAA  1132
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGATATGTTTTTTCAAAAGATTAAAATGCATTTCCTAAAAGTAAAA  1143

seq1  TCTCATGACAATAGGCACTTGTTTAGTGCTGCATCACTGAATTAATAAGA  1182
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATGACAATAGGCACTTGTTTAGTGCTGCATCACTGAATTAATAAGA  1193

seq1  ACACAATTTTGAATTC  1198
      ||||||||||||||||
seq2  ACACAATTTTGAATTC  1209


seq1: chr4_7460007_7460927
seq2: B6Ng01-207D21.g_63_985

seq1  GAATTCCAGGAACCTAGACAAAGATAAATAAGGGAGTTATATATTGGTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGAACCTAGACAAAGATAAATAAGGGAGTTATATATTGGTGT  50

seq1  TATTACTACCCTCAAATTTAGGAAAGAGGAGAAATGTATAGAGCTTTTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTACTACCCTCAAATTTAGGAAAGAGGAGAAATGTATAGAGCTTTTCA  100

seq1  GACATAGTGATAGAAAAAATGTGTGGTTTCAGTCATGTATATCAACAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATAGTGATAGAAAAAATGTGTGGTTTCAGTCATGTATATCAACAGAA  150

seq1  ATATAGTTCTTGCTATAAATCATTTTATAATTTCTGAGAGTACTGGAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGTTCTTGCTATAAATCATTTTATAATTTCTGAGAGTACTGGAAAA  200

seq1  TTGCAAACCCTGCTTTCTTTATATGTCACCAAAATGCCATAATTAAGATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAAACCCTGCTTTCTTTATATGTCACCAAAATGCCATAATTAAGATT  250

seq1  AAGTTTCTGCTAGGGCTGGGAGTACAAGGGCTTCATGGAAGTACTTGAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTCTGCTAGGGCTGGGAGTACAAGGGCTTCATGGAAGTACTTGAGG  300

seq1  TGGAGGGAAAGAGGGAGGGAAGACAGAGTTATGGCTTTATTTCACTCAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGGAAAGAGGGAGGGAAGACAGAGTTATGGCTTTATTTCACTCAAA  350

seq1  AGCATCAATGCCACATGCCATGCTGTAACAATGTAGTGTCCCATCAAGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCAATGCCACATGCCATGCTGTAACAATGTAGTGTCCCATCAAGCA  400

seq1  TCATTGTTTGGGCAAGATTAATCCTCCAAATACTGGTGTTGATTCTATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGTTTGGGCAAGATTAATCCTCCAAATACTGGTGTTGATTCTATAT  450

seq1  TGGATATTTATAATTTATGCTAGTTATTTACTACATGAAAATATAAATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATATTTATAATTTATGCTAGTTATTTACTACATGAAAATATAAATAT  500

seq1  TTAGCGCTGTTGTGGCATGGGTAAATACAAGAGTTTTTGTGGACAAGTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCGCTGTTGTGGCATGGGTAAATACAAGAGTTTTTGTGGACAAGTGT  550

seq1  GGAATTTTGGCCTTATTATACTTTTTTCTCTAGGAATCATCTAATCTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTTTGGCCTTATTATACTTTTTTCTCTAGGAATCATCTAATCTTTT  600

seq1  TTCAAACTGTGGCATGCTTACTTGTTCAATAAAGATAATCACAACCTACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAACTGTGGCATGCTTACTTGTTCAATAAAGATAATCACAACCTACT  650

seq1  TCTTATAGTTTGTGTCAAAAGGAAAACAGAATTCTTTGTGTGACCATTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATAGTTTGTGTCAAAAGGAAAACAGAATTCTTTGTGTGACCATTGA  700

seq1  TTTTGTTATTGGTGAGTTACAAGGTCACAAAATGGCCAAAAGAATA-TTA  749
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TTTTGTTATTGGTGAGTTACAAGGTCACAAAATGGCCAAAAGAATATTTA  750

seq1  TAGGCAAAAAGGGGTTTTTCAC-TTTTAAATGTGG-AAGGTTCTATTTAA  797
      |||||||||||||||||||||| |||||||||||| ||||||||||||||
seq2  TAGGCAAAAAGGGGTTTTTCACTTTTTAAATGTGGAAAGGTTCTATTTAA  800

seq1  AGTGTAGATACAAAAATATGAAAAGCTCTTGGTGATATCATTGTAATAAC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTAGATACAAAAATATGAAAAGCTCTTGGTGATATCATTGTAATAAC  850

seq1  ACG-TTTTTTCCAAATGAGTCTGGGAAAAATTATAATGGGGGCCATTTTA  896
      ||| |||||||||||||||||| |||||||||||||||||||||||||||
seq2  ACGTTTTTTTCCAAATGAGTCT-GGAAAAATTATAATGGGGGCCATTTTA  899

seq1  TGGCCCTATTGGAACTTGTCCTGAT  921
      |||||||| ||||||||||||||||
seq2  TGGCCCTA-TGGAACTTGTCCTGAT  923


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