BAC Information

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BAC

Clone NameB6Ng01-207H01
Chromosome4 (Build37)
Map Location 25,618,344 - 25,618,774
singlet/doubletsinglet
Overlap geneFut9
Upstream geneKlhl32, 1110007M04Rik, C230012O17Rik, Gpr63, Fhl5, 1810074P20Rik, Prdx6-rs2, LOC665019, LOC625732
Downstream geneLOC100040780, Hn1-ps1, Manea, Bhmt-ps1, LOC665079, Gng2-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-207H01.bB6Ng01-207H01.g
ACCGA026590GA026591
length4111,138
definitionB6Ng01-207H01.b B6Ng01-207H01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
tactgtagagaatatatcatataggtgtgtcttcagtatcttttcacagc
gaggctgtgacagtagaaaaatatagtttgacagtctgtcaacacaggag
ccatttaagccatttgaacttttgtatgatttagtgatttggacataatc
atttcttttatgattaaatactttattctaagtcttatagtactttaata
gaagttgtgctaaaatttaaaagttctattttaattttcatgagaaatct
taataacattgtaaagcagaattcaatgaggaaaattccattttcagact
actgttgtaaaattcaagacaaattccaaaagatcattttgtttggttta
gggtacttttcactgtgagggtgtgtgtgtgtgtatatgtgtgtgtgtgt
gtgtgggtgtg

gaattcaaggcccatacctaaacatgataaaaagcaatctacagcaatcc
agtagccaacatcaaagtaaatggtgagaacctggaagcaataccactaa
aatcagggactacataagggtgcccactctctccctacctattcaacatt
gtacttgaagtcctagccagagcaatttgacaacaaaaggagataaaggg
gataaaaaatggcaaggaagaagacaaaatatcactttttgcacatgata
tgatagtatatataagtgacccaaaaaattcccccagagaactcctaaac
ccgataaacaggttcaatgaagtagctggatataaaattaactcaaataa
gtcaatggcctttctctacacaaaggataaacaggctgaaaaaaaattag
ggaaacaacacccttctcaatagtcacaaataatataaaataccttggtg
tgactctaactaaggaagtgaaacttctgtatgataagaacttcaagtct
ctgaagaaagaaattaaagaagatctcagaagatggaaagatctcccatg
ctcatggattggcaggattgatagagtcaaaataatagctatcttgccaa
aggcaatctacagattaaatgcaatccccatcaaaattccaactcaattc
ttcaatgcattagaaagggcaatctccaaattcatctggaataacaaaaa
atctaggatttaaaaaactcttctcaaggatgaaagtacctctggtggaa
tcatcatgcctgacctaaagctgaactacagagcaattgtgataaaaact
gcatggtactggtatagtgacagacaagtagaccaatggaatagaattga
agacacagaaatgaacccacacacttatggtcacttgatcttcgacaagg
gagcgaaaaccatccagtggaaaaaagacagcatttcaacaagtggtgct
ggcacaactgggtggttatcatgtagaagaatgtgaatcgatcatctatc
tctgtactaggtcaagtctagtgatcagactcacaataaaacagagacac
tcaaactatgagagaagtgggaaaggctcgagatttggccagaatcctga
atgacgcatgctggtctgtagattcgagaatgcgtcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_25618344_25618774
seq2: B6Ng01-207H01.b_31_447 (reverse)

seq1  CACACCCACACACACACACACACACACACACACACACACACACACACACA  50
                    ||||| |||||||||||||||||| | |||||||||
seq2  --------------CACACCCACACACACACACACACATATACACACACA  36

seq1  CACACCCTCACAGTGAAAAGTACCCTAAACCAAACAAAATGATCTTTTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCCTCACAGTGAAAAGTACCCTAAACCAAACAAAATGATCTTTTGG  86

seq1  AATTTGTCTTGAATTTTACAACAGTAGTCTGAAAATGGAATTTTCCTCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGTCTTGAATTTTACAACAGTAGTCTGAAAATGGAATTTTCCTCAT  136

seq1  TGAATTCTGCTTTACAATGTTATTAAGATTTCTCATGAAAATTAAAATAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTCTGCTTTACAATGTTATTAAGATTTCTCATGAAAATTAAAATAG  186

seq1  AACTTTTAAATTTTAGCACAACTTCTATTAAAGTACTATAAGACTTAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTTAAATTTTAGCACAACTTCTATTAAAGTACTATAAGACTTAGAA  236

seq1  TAAAGTATTTAATCATAAAAGAAATGATTATGTCCAAATCACTAAATCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTATTTAATCATAAAAGAAATGATTATGTCCAAATCACTAAATCAT  286

seq1  ACAAAAGTTCAAATGGCTTAAATGGCTCCTGTGTTGACAGACTGTCAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAGTTCAAATGGCTTAAATGGCTCCTGTGTTGACAGACTGTCAAAC  336

seq1  TATATTTTTCTACTGTCACAGCCTCGCTGTGAAAAGATACTGAAGACACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTTTCTACTGTCACAGCCTCGCTGTGAAAAGATACTGAAGACACA  386

seq1  CCTATATGATATATTCTCTACAGTAGAATTC  431
      |||||||||||||||||||||||||||||||
seq2  CCTATATGATATATTCTCTACAGTAGAATTC  417


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