BAC Information

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BAC

Clone NameB6Ng01-207H15
Chromosome4 (Build37)
Map Location 93,720,809 - 93,903,505
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC620269, LOC384125, Tusc1
Downstream gene5830433M19Rik, Plaa, LOC667250, Lrrc19, Ift74, Tek, 4930579C15Rik, LOC100039252, Mysm1, LOC100039265, LOC665029, Jun
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-207H15.bB6Ng01-207H15.g
ACCGA026616GA026617
length1,152832
definitionB6Ng01-207H15.b B6Ng01-207H15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(93,720,809 - 93,721,949)(93,902,976 - 93,903,505)
sequence
gaattctatgatccattgatccctgtgattttctgtggttctctcttctt
tggtgagggggtagtattcatacttatctgtgggaataatgacaagattt
agtaggtagtaaggtagtgtgttgataaatcaatgtaggggttttctatg
gtctgagatgtctctggttccaagaagctggctatgtttccagtactagg
acagagagaagaggcataaatgatattatttgataaaccttcaaggaatt
acagtactttgcatttacctaatattatacactatatatatttacacatg
gcatatacatatcttaaaggaagtttagcacttgggctgataatgttccc
cacaagaaccatagacaaacaaaaactcctgtaccagacacaagaaacct
cctttcaaagggtttgttagactagtctaagtgactcccaaaacaatata
gatgactgagatagctcctggttccttatcatggattgaggctgggtccc
tatttctaaagacactacacacttggcacacagtttgagttatatctggc
ctgaaagcttctttcttttccaaagcctaccttccatggttcctgaaaat
attatgtaagattagaagggaaggagtgaataaaacagacctgcccagct
gcagcccttacaaatgacagttgctgccagcatgggaagatatgcataaa
ggtacaagagtggcatcctgtgtcactgccaacaaatgctgtctaactga
acttgagacccacttaatatgagaaaactcaagctagatttatcttgaac
ttcattcatgtgactctccttcccatattacctacctatcaagaagtatc
aatcaccaagaaatttcatgttttctaaagatggaaaaaaaaccaattct
tttccatcaagcccctcctttttctaaattgtttacaagctcactctgta
caaatgctactgatacttatatcagcaatttgacgctttaaaaaaaattt
ccgaagattaacgtctagaagcatgttttgttgtgggctcgtagcttcta
agtctataagtcagattatgccatcaatattaaagggcagggaatgagag
aacagaaagacatcagggctagagaatatgtgttcctaggcagctgcttc
tt
gaattcattacataaaagactttttaggtgcttttttcgctgttatttat
tcttttccctctgatgtgtgtatattcccatgtaaatatttaatatgtat
atgtgggggcgtttgtgcttttgcacatgaaggccagagaccaattttca
attttgttctttaagcaacaatcacttcgttatttctaattttaattttt
atacaagtagccatttcagaaaatttaattacaaagagatatcatgcatg
agtattgtatttacagtgtttccactttttcttctttccactgcaattcc
tccatgcaccctgctactccctatcaaatccatgacctccttttacacac
acacacatacacacccaccatgtatgtatatatatgtgtgtgtgtatata
atatgacatatatgatacatacatatgatatatctatacatactattaat
tcatctataaataagagtagggccgaccacttggtattggatgacctata
agggaatttttcctgtaaatggtgattcttcctctctcagaagccattaa
ttgccctgtagctcttcatctaggagtgacaccttatgagacactccccc
ctcaacaaccatgtttggcatgccaactggtgttctcattgctcaggttt
gttttagatgaccataatgttcacatttcatgggtacaaccttcctttca
tatctagaagacactatctcacagcatacattcttcacgttgtggagatt
aagtcttttctagccctctccctgtgattattcgcaggacttttaggtat
aaggaattgctgattgttagcatttattctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_93720809_93721949
seq2: B6Ng01-207H15.b_45_1196

seq1  GAATTCTATGATCCATTGATCCCTGTGATTTTCTGTGGTTCTCTCTTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATGATCCATTGATCCCTGTGATTTTCTGTGGTTCTCTCTTCTT  50

seq1  TGGTGAGGGGGTAGTATTCATACTTATCTGTGGGAATAATGACAAGATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGAGGGGGTAGTATTCATACTTATCTGTGGGAATAATGACAAGATTT  100

seq1  AGTAGGTAGTAAGGTAGTGTGTTGATAAATCAATGTAGGGGTTTTCTATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGGTAGTAAGGTAGTGTGTTGATAAATCAATGTAGGGGTTTTCTATG  150

seq1  GTCTGAGATGTCTCTGGTTCCAAGAAGCTGGCTATGTTTCCAGTACTAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGAGATGTCTCTGGTTCCAAGAAGCTGGCTATGTTTCCAGTACTAGG  200

seq1  ACAGAGAGAAGAGGCATAAATGATATTATTTGATAAACCTTCAAGGAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGAGAAGAGGCATAAATGATATTATTTGATAAACCTTCAAGGAATT  250

seq1  ACAGTACTTTGCATTTACCTAATATTATACACTATATATATTTACACATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTACTTTGCATTTACCTAATATTATACACTATATATATTTACACATG  300

seq1  GCATATACATATCTTAAAGGAAGTTTAGCACTTGGGCTGATAATGTTCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATACATATCTTAAAGGAAGTTTAGCACTTGGGCTGATAATGTTCCC  350

seq1  CACAAGAACCATAGACAAACAAAAACTCCTGTACCAGACACAAGAAACCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGAACCATAGACAAACAAAAACTCCTGTACCAGACACAAGAAACCT  400

seq1  CCTTTCAAAGGGTTTGTTAGACTAGTCTAAGTGACTCCCAAAACAATATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCAAAGGGTTTGTTAGACTAGTCTAAGTGACTCCCAAAACAATATA  450

seq1  GATGACTGAGATAGCTCCTGGTTCCTTATCATGGATTGAGGCTGGGTCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGACTGAGATAGCTCCTGGTTCCTTATCATGGATTGAGGCTGGGTCCC  500

seq1  TATTTCTAAAGACACTACACACTTGGCACACAGTTTGAGTTATATCTGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTAAAGACACTACACACTTGGCACACAGTTTGAGTTATATCTGGC  550

seq1  CTGAAAGCTTCTTTCTTTTCCAAAGCCTACCTTCCATGGTTCCTGAAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAGCTTCTTTCTTTTCCAAAGCCTACCTTCCATGGTTCCTGAAAAT  600

seq1  ATTATGTAAGATTAGAAGGGAAGGAGTGAATAAAACAGACCTGCCCAGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGTAAGATTAGAAGGGAAGGAGTGAATAAAACAGACCTGCCCAGCT  650

seq1  GCAGCCCTTACAAATGACAGTTGCTGCCAGCATGGGAAGATATGCATAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCCCTTACAAATGACAGTTGCTGCCAGCATGGGAAGATATGCATAAA  700

seq1  GGTACAAGAGTGGCATCCTGTGTCACTGCCAACAAATGCTGTCTAACTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACAAGAGTGGCATCCTGTGTCACTGCCAACAAATGCTGTCTAACTGA  750

seq1  ACTTGAGACCCACTTAATATGAGAAAACTCAAGCTAGATTTATCTTGAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGAGACCCACTTAATATGAGAAAACTCAAGCTAGATTTATCTTGAAC  800

seq1  TTCATTCATGTGACTCTCCTTCCCATATTACCTACCTATCAAGAAGTATC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTCATGTGACTCTCCTTCCCATATTACCTACCTATCAAGAAGTATC  850

seq1  AATCACCAAG-AATTTCATGTTTTCTAAAGATGGAAAAAAAACCAATTC-  898
      |||||||||| |||||||||||||||||||||||||||||||||||||| 
seq2  AATCACCAAGAAATTTCATGTTTTCTAAAGATGGAAAAAAAACCAATTCT  900

seq1  TTTCCATCAAGCCCCTCCTTTTTCT-AATTGTTTACAAGCTCACTCTGTA  947
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TTTCCATCAAGCCCCTCCTTTTTCTAAATTGTTTACAAGCTCACTCTGTA  950

seq1  CAAATGCTACTGATACTTATATCAGCATTTTGACGCTTTAAAAAAAA-TT  996
      ||||||||||||||||||||||||||| ||||||||||||||||||| ||
seq2  CAAATGCTACTGATACTTATATCAGCAATTTGACGCTTTAAAAAAAATTT  1000

seq1  CCG-AGA-TAACGTCTAGAAGGCATGTTTTG-TGTGGGCTCGTAGCTCTA  1043
      ||| ||| |||||||||||| |||||||||| |||||||||||||||   
seq2  CCGAAGATTAACGTCTAGAA-GCATGTTTTGTTGTGGGCTCGTAGCTTCT  1049

seq1  AAGTCTAT-AGTCAGTTTAATGCCATCAATATTAAAGGCCAGGG-ATGAG  1091
      |||||||| |||||| || ||||||||||||||||||| ||||| |||||
seq2  AAGTCTATAAGTCAGATT-ATGCCATCAATATTAAAGGGCAGGGAATGAG  1098

seq1  ---ACAGAAAGAACATCAGGGC-AGAGAATGTG---TCCTAAAGCAAGCT  1134
         |||||||| |||||||||| ||||||| ||   ||||  ||  ||||
seq2  AGAACAGAAAG-ACATCAGGGCTAGAGAATATGTGTTCCT--AGGCAGCT  1145

seq1  GCTTCTT  1141
      |||||||
seq2  GCTTCTT  1152

seq1: chr4_93902976_93903505
seq2: B6Ng01-207H15.g_67_596 (reverse)

seq1  AAGAATCACCATTTACAGGAAAAATTCCCTTATAGGTCATCCAATACCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATCACCATTTACAGGAAAAATTCCCTTATAGGTCATCCAATACCAA  50

seq1  GTGGTCGGCCCTACTCTTATTTATAGATGAATTAATAGTATGTATAGATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTCGGCCCTACTCTTATTTATAGATGAATTAATAGTATGTATAGATA  100

seq1  TATCATATGTATGTATCATATATGTCATATTATATACACACACACATATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATATGTATGTATCATATATGTCATATTATATACACACACACATATA  150

seq1  TATACATACATGGTGGGTGTGTATGTGTGTGTGTGTAAAAGGAGGTCATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACATACATGGTGGGTGTGTATGTGTGTGTGTGTAAAAGGAGGTCATG  200

seq1  GATTTGATAGGGAGTAGCAGGGTGCATGGAGGAATTGCAGTGGAAAGAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGATAGGGAGTAGCAGGGTGCATGGAGGAATTGCAGTGGAAAGAAG  250

seq1  AAAAAGTGGAAACACTGTAAATACAATACTCATGCATGATATCTCTTTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGTGGAAACACTGTAAATACAATACTCATGCATGATATCTCTTTGT  300

seq1  AATTAAATTTTCTGAAATGGCTACTTGTATAAAAATTAAAATTAGAAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAATTTTCTGAAATGGCTACTTGTATAAAAATTAAAATTAGAAATA  350

seq1  ACGAAGTGATTGTTGCTTAAAGAACAAAATTGAAAATTGGTCTCTGGCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAAGTGATTGTTGCTTAAAGAACAAAATTGAAAATTGGTCTCTGGCCT  400

seq1  TCATGTGCAAAAGCACAAACGCCCCCACATATACATATTAAATATTTACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTGCAAAAGCACAAACGCCCCCACATATACATATTAAATATTTACA  450

seq1  TGGGAATATACACACATCAGAGGGAAAAGAATAAATAACAGCGAAAAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAATATACACACATCAGAGGGAAAAGAATAAATAACAGCGAAAAAAG  500

seq1  CACCTAAAAAGTCTTTTATGTAATGAATTC  530
      ||||||||||||||||||||||||||||||
seq2  CACCTAAAAAGTCTTTTATGTAATGAATTC  530