BAC Information

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BAC

Clone NameB6Ng01-207K19
Chromosome4 (Build37)
Map Location 71,709,274 - 71,853,367
singlet/doubletdoublet
Overlap geneTle1
Upstream geneLOC100039565, LOC100039979, LOC667638, EG667649
Downstream geneAldoa-ps2, EG384113, LOC667713, LOC100039698
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-207K19.bB6Ng01-207K19.g
ACCGA026759GA026760
length9311,180
definitionB6Ng01-207K19.b B6Ng01-207K19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(71,852,451 - 71,853,367)(71,709,274 - 71,710,436)
sequence
gaattctctattagtgtatagtacaatacttctgtggaaaaccactcccc
gcaaccccacatccatgccttgaaactttgtagtacttgggatggaaccc
aaggcctcacacattcttaggcaagtattttacatacccagcccaactcg
ttattttaaagattgctggggtatgtgtgttaggaggctaagggtaggtg
ggtgcataagtaggagaaaggttttctgttttttctggggcagggtttga
taggattttcaaatattgtttatagaacttttcattgtgttttgtatgta
ataacagaaaaaaactacaaagagtgatagtttcataatttctcagctta
tgcacttttgatgtctttttaaaatgatgctacaattacctagtaacctg
tgttttagcacaattatttcaaattttaacgtttaaaatatgagttgttt
tattaatttgacctactttgaagcaaccacaggatcattagcgttgactt
ctttcccatgtatattttcatagtggttttcttaggttagggtcagtggt
actttggcatttttgacaaagattgggtactgatcctttttgatatagga
aaaaatatagaaaattcctaattttttattaatgaaactttgttaagaac
tgcggaaacagccccacccaggaacagtataacttatcggaggatgctat
gtttgatttatcctttagaggaggtaagagcagctcgtgctaatgtgtta
cacagctcatgctattctgtttagctcgtgggagcgcatgccagtatttt
gactggggttcgctttatcagcattatggattccagcccaggtatttaca
cgaagccttggtgcatcctggtcacctaggaagtttgaagtacaaatcac
tgggagtcatttcctacctactttgcagttc

gaattcttggggagtcagcaagacaggaggaattatgcagagatgactac
aacactaaaattcagcatcaatagtaacttcaattttaccatttttaatt
tatgtgtgaattcaagtttgtgtgtaccgaaatgtgttcaggtccacaca
gaagctagaagagagtgtcaggtaccaaggagctagaagtataaataatt
gtgagtttacctcctcttctcctctattcctaatattagtgctgggaacc
aaacttatgtcctcttggaagagcagaaagtactcttaaatatttgagcc
atcattctagccccgaaaaataacttttaaaaataatgtattattgactg
atccaagcatgattctgtcttgatttttttaaaagagtgaggactttgtt
tgaatgaataaacatgcatttttaaatgtatgggaatgcaattatctaaa
aattcttccacttcgtatgaatatttattcatagtaaccaataagtgtag
tcttctctgtttaactgcagacctcagctggacatgaatttggatatagc
ttggccataataacctcttctttctttcctcatttctccacctacttcta
tctcagtcccaagcatcatccgagtaaatctgccctgctttatattctat
gcctcgtgctctaagaatactagtcattcaataagtattgtggagcagtt
tctgaataataaatccaacttcactgaaaacattcttattcttatgcaca
catggttccagtcctcacaaaatttctttcccattttatttagaaatctt
catcttacttttgaaatactatatgtcatgttttacttttctaatttaat
ttattaagatcaggacatatgtccatatttatatatgttacttccattgt
ctttaaggtaatggatgctcaataactcatgcttgggttggttgaaagtt
caagaaaaaatactgataataatattgccttttttgttttcaaaattggt
gacatttcgtatgttattgaggtggacagccttcttcaaatctttaccag
aataacccttcaaattgtttttgaaggaccagttgttttaaatcaatata
ttctcttatatgaaactagggaggtatacgatggtaaccttagcattata
ttgaacagttcttactgcttaaactctgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_71852451_71853367
seq2: B6Ng01-207K19.b_42_972 (reverse)

seq1  GGACTGC-AAGTAGGTAGAAAATGACT-CCAGTGATTTGTGC-TCAAACT  47
      | ||||| |||||||||| |||||||| |||||||||||| | |||||||
seq2  GAACTGCAAAGTAGGTAGGAAATGACTCCCAGTGATTTGTACTTCAAACT  50

seq1  TCCTA-GTGACCAGGATGCA-CAAGGCATCGTGTAAATACCCTGGCTGG-  94
      ||||| |||||||||||||| |||||| |||||||||||||  |||||| 
seq2  TCCTAGGTGACCAGGATGCACCAAGGCTTCGTGTAAATACCTGGGCTGGA  100

seq1  ATCCAT-ATGCTGCTAAAGCGAA-CCCAGTC-AAATACT-GCATGCGCTC  140
      |||||| |||||| ||||||||| ||||||| ||||||| ||||||||||
seq2  ATCCATAATGCTGATAAAGCGAACCCCAGTCAAAATACTGGCATGCGCTC  150

seq1  CCACGAGCT-AACAGAATAGCATG-GCTGTGT-ACACATTAGCACGAGCT  187
      ||||||||| |||||||||||||| ||||||| |||||||||||||||||
seq2  CCACGAGCTAAACAGAATAGCATGAGCTGTGTAACACATTAGCACGAGCT  200

seq1  GCTCTTACCTCCTCTAAAGGAT-AATCAAACATAGCATCCTCCGATAAGT  236
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GCTCTTACCTCCTCTAAAGGATAAATCAAACATAGCATCCTCCGATAAGT  250

seq1  TATACTGTTCCTGGGTGGGGCTGTTTCCGCAGTTCTTAACAAAGTTTCAT  286
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTGTTCCTGGGTGGGGCTGTTTCCGCAGTTCTTAACAAAGTTTCAT  300

seq1  TAATAAAAAATTAGGAATTTTCTATATTTTTTCCTATATCAAAAAGGATC  336
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAAAAATTAGGAATTTTCTATATTTTTTCCTATATCAAAAAGGATC  350

seq1  AGTACCCAATCTTTGTCAAAAATGCCAAAGTACCACTGACCCTAACCTAA  386
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACCCAATCTTTGTCAAAAATGCCAAAGTACCACTGACCCTAACCTAA  400

seq1  GAAAACCACTATGAAAATATACATGGGAAAGAAGTCAACGCTAATGATCC  436
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACCACTATGAAAATATACATGGGAAAGAAGTCAACGCTAATGATCC  450

seq1  TGTGGTTGCTTCAAAGTAGGTCAAATTAATAAAACAACTCATATTTTAAA  486
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTTGCTTCAAAGTAGGTCAAATTAATAAAACAACTCATATTTTAAA  500

seq1  CGTTAAAATTTGAAATAATTGTGCTAAAACACAGGTTACTAGGTAATTGT  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTAAAATTTGAAATAATTGTGCTAAAACACAGGTTACTAGGTAATTGT  550

seq1  AGCATCATTTTAAAAAGACATCAAAAGTGCATAAGCTGAGAAATTATGAA  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCATTTTAAAAAGACATCAAAAGTGCATAAGCTGAGAAATTATGAA  600

seq1  ACTATCACTCTTTGTAGTTTTTTTCTGTTATTACATACAAAACACAATGA  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATCACTCTTTGTAGTTTTTTTCTGTTATTACATACAAAACACAATGA  650

seq1  AAAGTTCTATAAACAATATTTGAAAATCCTATCAAACCCTGCCCCAGAAA  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTCTATAAACAATATTTGAAAATCCTATCAAACCCTGCCCCAGAAA  700

seq1  AAACAGAAAACCTTTCTCCTACTTATGCACCCACCTACCCTTAGCCTCCT  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGAAAACCTTTCTCCTACTTATGCACCCACCTACCCTTAGCCTCCT  750

seq1  AACACACATACCCCAGCAATCTTTAAAATAACGAGTTGGGCTGGGTATGT  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACACATACCCCAGCAATCTTTAAAATAACGAGTTGGGCTGGGTATGT  800

seq1  AAAATACTTGCCTAAGAATGTGTGAGGCCTTGGGTTCCATCCCAAGTACT  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATACTTGCCTAAGAATGTGTGAGGCCTTGGGTTCCATCCCAAGTACT  850

seq1  ACAAAGTTTCAAGGCATGGATGTGGGGTTGCGGGGAGTGGTTTTCCACAG  886
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGTTTCAAGGCATGGATGTGGGGTTGCGGGGAGTGGTTTTCCACAG  900

seq1  AAGTATTGTACTATACACTAATAGAGAATTC  917
      |||||||||||||||||||||||||||||||
seq2  AAGTATTGTACTATACACTAATAGAGAATTC  931


seq1: chr4_71709274_71710436
seq2: B6Ng01-207K19.g_66_1245

seq1  GAATTCTTGGGGAGTCAGCAAGACAGGAGGAATTATGCAGAGATGACTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGGGGAGTCAGCAAGACAGGAGGAATTATGCAGAGATGACTAC  50

seq1  AACACTAAAATTCAGCATCAATAGTAACTTCAATTTTACCATTTTTAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTAAAATTCAGCATCAATAGTAACTTCAATTTTACCATTTTTAATT  100

seq1  TATGTGTGAATTCAAGTTTGTGTGTACCGAAATGTGTTCAGGTCCACACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGTGAATTCAAGTTTGTGTGTACCGAAATGTGTTCAGGTCCACACA  150

seq1  GAAGCTAGAAGAGAGTGTCAGGTACCAAGGAGCTAGAAGTATAAATAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTAGAAGAGAGTGTCAGGTACCAAGGAGCTAGAAGTATAAATAATT  200

seq1  GTGAGTTTACCTCCTCTTCTCCTCTATTCCTAATATTAGTGCTGGGAACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTTTACCTCCTCTTCTCCTCTATTCCTAATATTAGTGCTGGGAACC  250

seq1  AAACTTATGTCCTCTTGGAAGAGCAGAAAGTACTCTTAAATATTTGAGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTATGTCCTCTTGGAAGAGCAGAAAGTACTCTTAAATATTTGAGCC  300

seq1  ATCATTCTAGCCCCGAAAAATAACTTTTAAAAATAATGTATTATTGACTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTCTAGCCCCGAAAAATAACTTTTAAAAATAATGTATTATTGACTG  350

seq1  ATCCAAGCATGATTCTGTCTTGATTTTTTTAAAAGAGTGAGGACTTTGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAAGCATGATTCTGTCTTGATTTTTTTAAAAGAGTGAGGACTTTGTT  400

seq1  TGAATGAATAAACATGCATTTTTAAATGTATGGGAATGCAATTATCTAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGAATAAACATGCATTTTTAAATGTATGGGAATGCAATTATCTAAA  450

seq1  AATTCTTCCACTTCGTATGAATATTTATTCATAGTAACCAATAAGTGTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTTCCACTTCGTATGAATATTTATTCATAGTAACCAATAAGTGTAG  500

seq1  TCTTCTCTGTTTAACTGCAGACCTCAGCTGGACATGAATTTGGATATAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTCTGTTTAACTGCAGACCTCAGCTGGACATGAATTTGGATATAGC  550

seq1  TTGGCCATAATAACCTCTTCTTTCTTTCCTCATTTCTCCACCTACTTCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCCATAATAACCTCTTCTTTCTTTCCTCATTTCTCCACCTACTTCTA  600

seq1  TCTCAGTCCCAAGCATCATCCGAGTAAATCTGCCCTGCTTTATATTCTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGTCCCAAGCATCATCCGAGTAAATCTGCCCTGCTTTATATTCTAT  650

seq1  GCCTCGTGCTCTAAGAATACTAGTCATTCAATAAGTATTGTGGAGCAGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCGTGCTCTAAGAATACTAGTCATTCAATAAGTATTGTGGAGCAGTT  700

seq1  TCTGAATAATAAATCCAACTTCACTGAAAACATTCTTATTCTTATGCACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAATAATAAATCCAACTTCACTGAAAACATTCTTATTCTTATGCACA  750

seq1  CATGGTTCCAGTCCTCACAAAATTTCTTTCCCATTTTATTTAGAAATCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTTCCAGTCCTCACAAAATTTCTTTCCCATTTTATTTAGAAATCTT  800

seq1  CATCTTACTTTTGAAATACTATATGTCATGTTTTACTTTTCTAATTTAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTACTTTTGAAATACTATATGTCATGTTTTACTTTTCTAATTTAAT  850

seq1  TTATTAAGATCAGGACATATGTCCATATTTATATATGTTACTTCCATTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAAGATCAGGACATATGTCCATATTTATATATGTTACTTCCATTGT  900

seq1  CTTTAAGGTAATGGATGCTCAATAACTCATGCTT-GGTTGGTTGAAAGTT  949
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CTTTAAGGTAATGGATGCTCAATAACTCATGCTTGGGTTGGTTGAAAGTT  950

seq1  CAAG-AAAAATACTGATAAT-ATA-TGCCTTTT---GTTTCAAAAT--GT  991
      |||| ||||||||||||||| ||| ||||||||    |||||||||  ||
seq2  CAAGAAAAAATACTGATAATAATATTGCCTTTTTTGTTTTCAAAATTGGT  1000

seq1  GACA-TTCGTAATGTTATTGA-GTGGACAG-CTTCTCAAAATC-TTACCA  1037
      |||| ||||| |||||||||| |||||||| |||||  ||||| ||||||
seq2  GACATTTCGT-ATGTTATTGAGGTGGACAGCCTTCTTCAAATCTTTACCA  1049

seq1  G-ATAAACCTTCAAA-TGTTTT--GAGGAACAG-TGTTTTAAATCAATAT  1082
      | |||| |||||||| ||||||   |||| ||| ||||||||||||||||
seq2  GAATAACCCTTCAAATTGTTTTTGAAGGACCAGTTGTTTTAAATCAATAT  1099

seq1  A-TCTC-TATATGAAATTAGGGAAGTTATAGGATGTTAACCCTTAGCATT  1130
      | |||| ||||||||| ||||| || |||| |||| ||| ||||||||| 
seq2  ATTCTCTTATATGAAACTAGGG-AGGTATACGATGGTAA-CCTTAGCAT-  1146

seq1  TATATTTTAGACAG-TCTTACTGCTT--ACTCTGTA  1163
        ||| ||  |||| |||||||||||  ||||||||
seq2  --TATATTGAACAGTTCTTACTGCTTAAACTCTGTA  1180


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