BAC Information

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BAC

Clone NameB6Ng01-208E15
Chromosome4 (Build37)
Map Location 38,216,931 - 38,373,660
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC277771, LOC100039448
Downstream geneLOC665520, LOC100039487
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-208E15.bB6Ng01-208E15.g
ACCGA027210GA027211
length1,1811,151
definitionB6Ng01-208E15.b B6Ng01-208E15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(38,216,931 - 38,217,706)(38,372,512 - 38,373,660)
sequence
gaattctcacctgaggaataccaaatggctgagaagcacctgaaaaaatg
ttcagcatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatgctaagatctaaaattcaggtgacagga
gatgctggtgaggatgtggagaaagaggaatactcctccattgttggtga
aattgcaagcttgtacaaccactctggaaatcagtctggtggttcctcag
aaaattggacttagtactaccagaggatcccgcaatacctctcctgggca
tatatcaagaagatcttccaactggtaagaaggacacatgctctactatg
ttcatagcagacttatttataatagccagaagctggaaagaacccagatg
cccctcaacagaggaatggatacagaaaatgtggtacatttacacaatgg
attactactcagctattaaaaagaatgaatttatgaaattcctaggcaaa
tggatggaccaggagggcatcatcttgagtgaggtaacccaatcacaaaa
gaactcaaatgctttctaaaggtgatagttatttttaataatgtacatct
caaagttctttcctagcttgtagattgcatcatgaatctgctccagcagc
aatgttgaaagatatcaaagattagtattgtgccagagatactgcacagt
gagatgttggagttttcattcacttctgaaactaaggacaatgtgaagac
aaaatgcagaacaaaactccacaccagcattaagtcttcagaacacatag
tcctcatgccacacatattcgacgcatacccattgtggctgtgctagcca
gtgggctgaattccatgtagtctaaagtcacttgttcttcctacattgtc
cttggcaaatacatttaccaggagcggaaaaaacccacaagctgggtaga
tttcagcaattcaaataagtgttttaaaacatttctggagtcattgatgt
ccaagatcagatttagcacctgtgttttgctccttttcatcatagatatg
tttttctgagaataacatcctttgttgttatggagctaacatgtgaaagg
gcattcaaggctcaattgataatttctttgtagtaacaatctcatccatc
atgaagatgttagtcatgtccatgggacaaa

gaattcatcagatatgggaagcagtttagacaactatgtaagaatggatg
ctgcagatgatgtacgttaaatctaagtacaggctccagttgaattcttt
cattaccatagaatccacattgttgactttgtcttggaggcctgttaatg
attggaaatggatttcatattacagaaacatcttctgttacttcaaattg
tgctctttcaaatttaaccctatcttaaataatttccattgatcttgact
attatgcatgtgtctaggtgtagtggcttagccaagatgacacataaatt
atccttcacagtggtttaggattttacttgatcactagaatttttatctt
cttatatagtttatttatttatcaatttcaataatattaaggaagaaaaa
attaaaatataaagactattctgagtatattagaagaaaattgtcacatt
tatgtttcactattcatttagagatttttatacataattaaatttgtgag
gaaaattatcacctattatgtaaactaaatatttttattatttacgaact
cttaatcatctcagttatttttgaggaataaatgaactgtaccgcataag
ctttagtgtttgaacacttagtcctcaaattgtggaactaacttgcaaag
aaacagagccattagaatgtgatccctggtggagggatgtctctaagagt
agttcttaaagctttaatagactgccctccttgccatgtcttttccccac
catcctttcttttgttcttcgttttctcccaccttcctatcttctaccct
tccttgctctctccttccctcatccctctatcctttctttcaccagtccc
tccttcccttccttccttccttccttccttaccttccttccttccttcct
tccttctttttttccccttttctcattttaggtatatgagtattatgaaa
cccttgtgaactggagttacagatagttgtgagcttcatgtgcgtcctgg
aatttaacctgttgtgctctggaagacagcctgttacttcttaacactga
cctccctcctctagctcttatccatgtcaatcacattactttatatttgc
aatctggttctttttatgccagtgaatgtgtcttggtccatccatcttct
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_38216931_38217706
seq2: B6Ng01-208E15.b_452_1225

seq1  ACAGAGGAATGGATACAGAAAATGTGGTACATTTACACAATGGATTACTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGGAATGGATACAGAAAATGTGGTACATTTACACAATGGATTACTA  50

seq1  CTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGGCAAATGGATGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGGCAAATGGATGG  100

seq1  ACCAGGAGGGCATCATCTTGAGTGAGGTAACCCAATCACAAAAGAACTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGAGGGCATCATCTTGAGTGAGGTAACCCAATCACAAAAGAACTCA  150

seq1  AATGCTTTCTAAAGGTGATAGTTATTTTTAATAATGTACATCTCAAAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTTTCTAAAGGTGATAGTTATTTTTAATAATGTACATCTCAAAGTT  200

seq1  CTTTCCTAGCTTGTAGATTGCATCATGAATCTGCTCCAGCAGCAATGTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCTAGCTTGTAGATTGCATCATGAATCTGCTCCAGCAGCAATGTTG  250

seq1  AAAGATATCAAAGATTAGTATTGTGCCAGAGATACTGCACAGTGAGATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATATCAAAGATTAGTATTGTGCCAGAGATACTGCACAGTGAGATGT  300

seq1  TGGAGTTTTCATTCACTTCTGAAACTAAGGACAATGTGAAGACAAAATGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTTTTCATTCACTTCTGAAACTAAGGACAATGTGAAGACAAAATGC  350

seq1  AGAACAAAACTCCACACCAGCATTAAGTCTTCAGAACACATAGTCCTCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAAAACTCCACACCAGCATTAAGTCTTCAGAACACATAGTCCTCAT  400

seq1  GCCACACATATTCGACGCATACCCATTGTGGCTGTGCTAGCCAGTGGGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACACATATTCGACGCATACCCATTGTGGCTGTGCTAGCCAGTGGGCT  450

seq1  GAATTCCATGTAGTCTAAAGTCACTTGTTCTTCCTACATTGTCCTTGGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGTAGTCTAAAGTCACTTGTTCTTCCTACATTGTCCTTGGCA  500

seq1  AATACATTTACCAGGAGCGGAAAAAACCCACAAGCTGGGTAGATTTCAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACATTTACCAGGAGCGGAAAAAACCCACAAGCTGGGTAGATTTCAGC  550

seq1  AATTCAAATAAGTGTTTTAAAACATTTCTGGAGTCATTGATGTCCAAGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAAATAAGTGTTTTAAAACATTTCTGGAGTCATTGATGTCCAAGAT  600

seq1  CAAGATTTAGCACCTGTG-TGTGCTCCTTTTCATCATAGATATG-TTTTC  648
      | |||||||||||||||| | ||||||||||||||||||||||| |||||
seq2  C-AGATTTAGCACCTGTGTTTTGCTCCTTTTCATCATAGATATGTTTTTC  649

seq1  TGAG-ATAACATCCTTTG-TGTTAT-GAGCTAACATGGTGAAAGGGGCAT  695
      |||| ||||||||||||| |||||| |||||||||| |||||| ||||||
seq2  TGAGAATAACATCCTTTGTTGTTATGGAGCTAACAT-GTGAAA-GGGCAT  697

seq1  TCAA-GCTCCATTG--AATATCTTTGTAAGGTTAACAATCTCATCCATCT  742
      |||| |||| ||||  ||| ||||||||    ||||||||||||||||| 
seq2  TCAAGGCTCAATTGATAATTTCTTTGTA---GTAACAATCTCATCCATC-  743

seq1  ATGAGGATAGTTTAGTCATGGTCCAATGGACAAA  776
      |||| |||   |||||||| |||||  |||||||
seq2  ATGAAGAT--GTTAGTCAT-GTCCATGGGACAAA  774


seq1: chr4_38372512_38373660
seq2: B6Ng01-208E15.g_64_1214 (reverse)

seq1  AAGAAGATAGAAGGGACCAAGACACATTTCACTGGCA-ATAAAGAAACAG  49
      |||||||| | | ||||||||||||| |||||||||| | |||||| |||
seq2  AAGAAGAT-GGATGGACCAAGACACA-TTCACTGGCATAAAAAGAACCAG  48

seq1  AATGGAAATA-AAAGTAAAAGTGATGGACATGGATAAGAGCTAGA-GAGG  97
      | || ||||| ||||| || ||||| ||||||||||||||||||| ||||
seq2  ATTGCAAATATAAAGT-AATGTGATTGACATGGATAAGAGCTAGAGGAGG  97

seq1  GAGGTCAGTTGTTAAG-AGT-ACAGGCTGTCCTTCCAGAGCAC-ACAGGT  144
      |||||||| ||||||| ||| ||||||||| |||||||||||| ||||||
seq2  GAGGTCAG-TGTTAAGAAGTAACAGGCTGT-CTTCCAGAGCACAACAGGT  145

seq1  TAAATTCCCAGGACGCACATTGAAGCTCACAACTATCTGTAACTCCAGTT  194
      |||||| |||||||||||| ||||||||||||||||||||||||||||||
seq2  TAAATT-CCAGGACGCACA-TGAAGCTCACAACTATCTGTAACTCCAGTT  193

seq1  CACAA-GGTTTCATAATACTCATATACCTAAAATGAG-AAAGGGGAAAAA  242
      ||||| ||||||||||||||||||||||||||||||| ||||||||||||
seq2  CACAAGGGTTTCATAATACTCATATACCTAAAATGAGAAAAGGGGAAAAA  243

seq1  AAGAAGGAAGGAAGGAAGGAAGGAAGG-AAGGAAGGAAGGAAGGAAGGAA  291
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AAGAAGGAAGGAAGGAAGGAAGGAAGGTAAGGAAGGAAGGAAGGAAGGAA  293

seq1  GGGAAGGAGGGACTGGTGAAAGAAAGGATAGAGGGATGAGGGAAGGAGAG  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGGAGGGACTGGTGAAAGAAAGGATAGAGGGATGAGGGAAGGAGAG  343

seq1  AGCAAGGAAGGGTAGAAGATAGGAAGGTGGGAGAAAACGAAGAACAAAAG  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGGAAGGGTAGAAGATAGGAAGGTGGGAGAAAACGAAGAACAAAAG  393

seq1  AAAGGATGGTGGGGAAAAGACATGGCAAGGAGGGCAGTCTATTAAAGCTT  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGATGGTGGGGAAAAGACATGGCAAGGAGGGCAGTCTATTAAAGCTT  443

seq1  TAAGAACTACTCTTAGAGACATCCCTCCACCAGGGATCACATTCTAATGG  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAACTACTCTTAGAGACATCCCTCCACCAGGGATCACATTCTAATGG  493

seq1  CTCTGTTTCTTTGCAAGTTAGTTCCACAATTTGAGGACTAAGTGTTCAAA  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTTTCTTTGCAAGTTAGTTCCACAATTTGAGGACTAAGTGTTCAAA  543

seq1  CACTAAAGCTTATGCGGTACAGTTCATTTATTCCTCAAAAATAACTGAGA  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAAAGCTTATGCGGTACAGTTCATTTATTCCTCAAAAATAACTGAGA  593

seq1  TGATTAAGAGTTCGTAAATAATAAAAATATTTAGTTTACATAATAGGTGA  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTAAGAGTTCGTAAATAATAAAAATATTTAGTTTACATAATAGGTGA  643

seq1  TAATTTTCCTCACAAATTTAATTATGTATAAAAATCTCTAAATGAATAGT  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTTCCTCACAAATTTAATTATGTATAAAAATCTCTAAATGAATAGT  693

seq1  GAAACATAAATGTGACAATTTTCTTCTAATATACTCAGAATAGTCTTTAT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACATAAATGTGACAATTTTCTTCTAATATACTCAGAATAGTCTTTAT  743

seq1  ATTTTAATTTTTTCTTCCTTAATATTATTGAAATTGATAAATAAATAAAC  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAATTTTTTCTTCCTTAATATTATTGAAATTGATAAATAAATAAAC  793

seq1  TATATAAGAAGATAAAAATTCTAGTGATCAAGTAAAATCCTAAACCACTG  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAAGAAGATAAAAATTCTAGTGATCAAGTAAAATCCTAAACCACTG  843

seq1  TGAAGGATAATTTATGTGTCATCTTGGCTAAGCCACTACACCTAGACACA  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGATAATTTATGTGTCATCTTGGCTAAGCCACTACACCTAGACACA  893

seq1  TGCATAATAGTCAAGATCAATGGAAATTATTTAAGATAGGGTTAAATTTG  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATAATAGTCAAGATCAATGGAAATTATTTAAGATAGGGTTAAATTTG  943

seq1  AAAGAGCACAATTTGAAGTAACAGAAGATGTTTCTGTAATATGAAATCCA  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGCACAATTTGAAGTAACAGAAGATGTTTCTGTAATATGAAATCCA  993

seq1  TTTCCAATCATTAACAGGCCTCCAAGACAAAGTCAACAATGTGGATTCTA  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAATCATTAACAGGCCTCCAAGACAAAGTCAACAATGTGGATTCTA  1043

seq1  TGGTAATGAAAGAATTCAACTGGAGCCTGTACTTAGATTTAACGTACATC  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAATGAAAGAATTCAACTGGAGCCTGTACTTAGATTTAACGTACATC  1093

seq1  ATCTGCAGCATCCATTCTTACATAGTTGTCTAAACTGCTTCCCATATCTG  1141
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCAGCATCCATTCTTACATAGTTGTCTAAACTGCTTCCCATATCTG  1143

seq1  ATGAATTC  1149
      ||||||||
seq2  ATGAATTC  1151


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