BAC Information

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BAC

Clone NameB6Ng01-208G17
Chromosome4 (Build37)
Map Location 64,079,247 - 64,258,675
singlet/doubletdoublet
Overlap genenone
Upstream geneWhrn, Atp6v1g1, 6330416G13Rik, LOC670833, 1700018C11Rik, LOC667451, Tnfsf15, Tnfsf8, Rpl17-ps, Tnc
Downstream genePappa, Astn2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-208G17.bB6Ng01-208G17.g
ACCGA027306GA027307
length272325
definitionB6Ng01-208G17.b B6Ng01-208G17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(64,079,247 - 64,079,518)(64,258,351 - 64,258,675)
sequence
ttatatacttttcagctcttgtttggtgcatacacactttaaatacaatg
tctgattggtagtttgatgcttttcttcctgaaataatcccatctagggt
acctactttatttcacattaataaaaaaaaaaccactatctcaaggcaaa
agtgatgaaggagggaatccaaagtcatgctttggcctccacttatgaat
gagcacaggtatgcaacagcctatttatagacacatagacctacagagag
agaggtgggaggggaggggttg
atttgcttagaaaaagtatttcttctagactgacactctaaaataatttg
catataaacaagatgtaagtattccaaactttagtagctttgtcttttct
acccaaacatggttatgctttcaaactattgaggagcttaatagacctgt
gactccagctgcatatgtagcagaggatggccttgtctggaatcaatagg
aggagaggcccttggtccttgaaggctctatgtcccagtgtaggggaatt
tgaggatggagagacaggagttggtggatgggtgggggaacaccctcata
gaaacaggggaggggagcggatagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_64079247_64079518
seq2: B6Ng01-208G17.b_52_323

seq1  TTATATACTTTTCAGCTCTTGTTTGGTGCATACACACTTTAAATACAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATACTTTTCAGCTCTTGTTTGGTGCATACACACTTTAAATACAATG  50

seq1  TCTGATTGGTAGTTTGATGCTTTTCTTCCTGAAATAATCCCATCTAGGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATTGGTAGTTTGATGCTTTTCTTCCTGAAATAATCCCATCTAGGGT  100

seq1  ACCTACTTTATTTCACATTAATAAAAAAAAAACCACTATCTCAAGGCAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTACTTTATTTCACATTAATAAAAAAAAAACCACTATCTCAAGGCAAA  150

seq1  AGTGATGAAGGAGGGAATCCAAAGTCATGCTTTGGCCTCCACTTATGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATGAAGGAGGGAATCCAAAGTCATGCTTTGGCCTCCACTTATGAAT  200

seq1  GAGCACAGGTATGCAACAGCCTATTTATAGACACATAGACCTACAGAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCACAGGTATGCAACAGCCTATTTATAGACACATAGACCTACAGAGAG  250

seq1  AGAGGTGGGAGGGGAGGGGTTG  272
      ||||||||||||||||||||||
seq2  AGAGGTGGGAGGGGAGGGGTTG  272

seq1: chr4_64258351_64258675
seq2: B6Ng01-208G17.g_71_395 (reverse)

seq1  CCTATCCCCTCCCCTCCCCTGTTTCTATGAGGGTGTTCCCCCACCCATCC  50
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATCCGCTCCCCTCCCCTGTTTCTATGAGGGTGTTCCCCCACCCATCC  50

seq1  ACCAACTCCTGTCTCTCCATCCTCAAATTCCCCTACACTGGGACATAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAACTCCTGTCTCTCCATCCTCAAATTCCCCTACACTGGGACATAGAG  100

seq1  CCTTCAAGGACCAAGGGCCTCTCCTCCTATTGATTCCAGACAAGGCCATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCAAGGACCAAGGGCCTCTCCTCCTATTGATTCCAGACAAGGCCATC  150

seq1  CTCTGCTACATATGCAGCTGGAGTCACAGGTCTATTAAGCTCCTCAATAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCTACATATGCAGCTGGAGTCACAGGTCTATTAAGCTCCTCAATAG  200

seq1  TTTGAAAGCATAACCATGTTTGGGTAGAAAAGACAAAGCTACTAAAGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAAGCATAACCATGTTTGGGTAGAAAAGACAAAGCTACTAAAGTTT  250

seq1  GGAATACTTACATCTTGTTTATATGCAAATTATTTTAGAGTGTCAGTCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATACTTACATCTTGTTTATATGCAAATTATTTTAGAGTGTCAGTCTA  300

seq1  GAAGAAATACTTTTTCTAAGCAAAT  325
      |||||||||||||||||||||||||
seq2  GAAGAAATACTTTTTCTAAGCAAAT  325