BAC Information

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BAC

Clone NameB6Ng01-209A14
Chromosome4 (Build37)
Map Location 118,006,440 - 118,112,883
singlet/doubletdoublet
Overlap geneHyi, BC059842, Med8, Elovl1, Cdc20
Upstream gene4931406I20Rik, LOC100041093, Prnpip1, Dmap1, LOC433749, Klf17, Ppia-ps4_1138.1, Slc6a9, B4galt2, Atp6v0b, Dph2, Ipo13, Artn, St3gal3, Jmjd2a, Ptprf
Downstream geneMpl, Tie1, LOC545675, LOC666596, 2610528J11Rik, 6330530A05Rik, 1110020C03Rik, Ebna1bp2, LOC100041290, Olfr62, Olfr1343-ps1, Olfr1342, Olfr1341, Olfr1340, Olfr1339, Olfr1338, Olfr1524-ps1, Olfr1337, Olfr219-ps1, GA_x5J8B7W3BSW-40181-41086, Olfr1335, Olfr1333, GA_x5J8B7TQTH0-2-774, Olfr1332-ps1, Olfr1331, Olfr1330, Olfr1329, Olfr1519, Lao1, LOC666703, OTTMUSG00000008833, Slc2a1, Zfp691, Ermap, Ccdc23, 4930538K18Rik, AU022252, Lepre1, Cldn19, Ybx1, Ppih, 1700041C02Rik, Ldha-ps2, LOC100041471, Ppcs, Zmynd12
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-209A14.bB6Ng01-209A14.g
ACCGA027758GA027759
length591169
definitionB6Ng01-209A14.b B6Ng01-209A14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(118,112,299 - 118,112,883)(118,006,440 - 118,006,608)
sequence
gaattctaggatatacagagaaatatagccagggctatacagagaaaccc
tgtctcaaaaaaccaaaaaaaaaaaaaaaaaaaaaaaagaaaaggaaaaa
aaaaaagaaagaaagggaagaaagacaagtgtagtttcagagaaactaca
gtgagtgtggctaacagctgaagaccctgccgtcatcagagttcatctta
ggctaaggactgagcgtcttccaactccttactaggcagcatattgctgt
gactacaatgctgtgcctttgttaacatctcttacctcattcggacccaa
tttctttctgtttgttttttgaaacggggtccctctattacatagcccta
cctgtcctggaactcacagagaaccacctgccactgcctcccaagtgttg
ggattacgtaaaattaaggcagtttgctatctgccttgagatcagtaaac
ttgccagatgtggtgacacacacctttaatcccagcactccgaaggcaga
cacatttgagttcgaggtcagcctggtttacacagtgagttataggacaa
ccagtgctacacaaaaccttgtctctaagataaaaaaaaaa
catggactcgacaaatgcagatgctggagctgtggtgccgtgcaggttgg
ggaagaaagatactgaagtcactataacataaacaagtttgtgcgcgtgt
gcttgtgcgtgtgcatgtgtgtgtgcatgtgcgtgtgtgtgtgtgtgtgt
gtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_118112299_118112883
seq2: B6Ng01-209A14.b_51_641 (reverse)

seq1  TTTTTTTTTT------GAGACAAGGTTTTGTGTAGCACTGGTTGTCCTAT  44
      ||||||||||      ||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTATCTTAGAGACAAGGTTTTGTGTAGCACTGGTTGTCCTAT  50

seq1  AACTCACTGTGTAAACCAGGCTGACCTCGAACTCAAATGTGTCTGCCTTC  94
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCACTGTGTAAACCAGGCTGACCTCGAACTCAAATGTGTCTGCCTTC  100

seq1  GGAGTGCTGGGATTAAAGGTGTGTGTCACCACATCTGGCAAGTTTACTGA  144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTGCTGGGATTAAAGGTGTGTGTCACCACATCTGGCAAGTTTACTGA  150

seq1  TCTCAAGGCAGATAGCAAACTGCCTTAATTTTACGTAATCCCAACACTTG  194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAGGCAGATAGCAAACTGCCTTAATTTTACGTAATCCCAACACTTG  200

seq1  GGAGGCAGTGGCAGGTGGTTCTCTGTGAGTTCCAGGACAGGTAGGGCTAT  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCAGTGGCAGGTGGTTCTCTGTGAGTTCCAGGACAGGTAGGGCTAT  250

seq1  GTAATAGAGGGACCCCGTTTCAAAAAACAAACAGAAAGAAATTGGGTCCG  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATAGAGGGACCCCGTTTCAAAAAACAAACAGAAAGAAATTGGGTCCG  300

seq1  AATGAGGTAAGAGATGTTAACAAAGGCACAGCATTGTAGTCACAGCAATA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGGTAAGAGATGTTAACAAAGGCACAGCATTGTAGTCACAGCAATA  350

seq1  TGCTGCCTAGTAAGGAGTTGGAAGACGCTCAGTCCTTAGCCTAAGATGAA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCCTAGTAAGGAGTTGGAAGACGCTCAGTCCTTAGCCTAAGATGAA  400

seq1  CTCTGATGACGGCAGGGTCTTCAGCTGTTAGCCACACTCACTGTAGTTTC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGATGACGGCAGGGTCTTCAGCTGTTAGCCACACTCACTGTAGTTTC  450

seq1  TCTGAAACTACACTTGTCTTTCTTCCCTTTCTTTCTTTTTTTTTTTCCTT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAACTACACTTGTCTTTCTTCCCTTTCTTTCTTTTTTTTTTTCCTT  500

seq1  TTCTTTTTTTTTTTTTTTTTTTTTTTTGGTTTTTTGAGACAGGGTTTCTC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTTTTTTTTTTTTTTTTTTTTTGGTTTTTTGAGACAGGGTTTCTC  550

seq1  TGTATAGCCCTGGCTATATTTCTCTGTATATCCTAGAATTC  585
      |||||||||||||||||||||||||||||||||||||||||
seq2  TGTATAGCCCTGGCTATATTTCTCTGTATATCCTAGAATTC  591

seq1: chr4_118006440_118006608
seq2: B6Ng01-209A14.g_68_236

seq1  CATGGACTCGACAAATGCAGATGCTGGAGCTGTGGTGCCGTGCAGGTTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGACTCGACAAATGCAGATGCTGGAGCTGTGGTGCCGTGCAGGTTGG  50

seq1  GGAAGAAAGATACTGAAGTCACTATAACATAAACAAGTTTGTGCGCGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAAAGATACTGAAGTCACTATAACATAAACAAGTTTGTGCGCGTGT  100

seq1  GCTTGTGCGTGTGCATGTGTGTGTGCATGTGCGTGTGTGTGTGTGTGTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTGCGTGTGCATGTGTGTGTGCATGTGCGTGTGTGTGTGTGTGTGT  150

seq1  GTGTGTGTGTGTGTGTGTG  169
      |||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTG  169