BAC Information

Click to search

BAC

Clone NameB6Ng01-210H10
Chromosome4 (Build37)
Map Location 151,375,394 - 151,498,859
singlet/doubletdoublet
Overlap geneKlhl21, Zbtb48, Tas1r1, Nol9, EG666980, Plekhg5, Tnfrsf25, Espn
Upstream geneUts2, Per3, Vamp3, Camta1, LOC100041960, Dnajc11, Thap3, Phf13
Downstream geneLOC100043284, Hes2, Acot7, Gpr153, Hes3, Icmt, Rnf207, Rpl22, Chd5, Kcnab2, LOC100042028, Nphp4, LOC667039, Gm833
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-210H10.bB6Ng01-210H10.g
ACCGA028795GA028796
length955863
definitionB6Ng01-210H10.b B6Ng01-210H10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(151,497,911 - 151,498,859)(151,375,394 - 151,376,244)
sequence
gaattcagtaatgaggccatttgccgctatattgaccgcagcttctcctt
ttggaaggagaaggaggcagaactctttgacatttgacagcaaatgtaga
gtttagttttgtccctggatgcctgtctgacatcgagaggccagaatcag
acagaaagacgggttttttgttttttgttttttttagaagtctgcttctt
tgggacctttgaggtccctaggagggaggaagtgaggcattcgttcatga
gcttgagggggcagggcaggtgtttctctctgtgaagccagacagcagaa
gctttctgagttaagggactctgggttccctgaggcagtgggcttccatc
tcaccatctctggggtttgctacctccgtggtcacctgtggaatgttctg
tgtgatgtgtgatgtgcacagaccccccttctcttctgtaacatcgaagg
aataaaacactgttgtaggctgtgttgctacccctctccccatgtcatta
tagcctcatagttgtgaaacatcccagtgccactaagaagcgagcaagcg
tgggtcagtgggtcccccacaggggagacagaggcagcctggtcttcctg
agctgagcacatatgtggtccaagcctacatctgcccagaaacgtggagc
catctgggcacctgctttgtgggaaatcaggacccagctactttttctgt
ctttcgcttttacctcctctgatctatgtggctccacctgtagcaaactg
gttagggtcactggggagcaggaggtcccgcctacatagtctgtcaccaa
gattgcaccgtaggaaggccattaaaaagggggtctttccttgcaaagac
atctatgttctgctgtccctgaattctgcacatcccctgggttgggtttg
caggccttccaactctgggattctcgggccaagcttgttcctgagcttgt
ggtca
gaattcactttgtagactaggttgccctcaaattcagaaatctgcctgcc
tctaccaaccaagtgctgggattaaaggcgtgtgccaccactgccccgct
ataaaattaagtttttaaaatgtttttgttggggctggagagatggctcc
gtggttaagagcactgactgctctttcagaggtcctgatttcaatcccca
gcaaccacatggtaactcacaaccatatatagtgtaatgccctcttctgg
catgcaggcatacatgcaggtagagtgtttatatacattaaataaataag
taaaaatgtttttattgtatgtgtatttacagatattgtgtctgtgtata
tctgtataccacatgtgtgcttggggcatctggagtccagaagaaaggta
tcagatctcctgaaactggacttaggaaaggttgtgtgcggccatgtggg
tgctggcaatcaaacccaggttctcaagtccatgctgttaaccactgagc
aatctctgcagctgtttaaaaaaaaaaaagggctgtcctgggctggaggc
agtgcacacctttagtcccagcactcaggacacaggcaggtggatcgaca
tgagtttgaagccagcctggtctgcagagtgagctctagggcagccgcag
ctatatggagagaccccctctcgaagaaaaaaacactgagacaaaaaccc
aaggggacagtttttcacaacgattccaggttaccctcgtgcctatctaa
aaatcagaatttgaacaccaaatgaagtgccttatctttctttttaaccc
agggatcacccatgcaagcagcttggagtgaaagttaatttgtgttatgg
ggtagtctttgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_151497911_151498859
seq2: B6Ng01-210H10.b_43_997 (reverse)

seq1  TGACCACAGCTTCAGG-ACCAGCTTGGCCCGAGATTCCCAG-GTTGGAAG  48
      ||||||||   ||||| || |||||||||||||| |||||| ||||||||
seq2  TGACCACAAGCTCAGGAACAAGCTTGGCCCGAGAATCCCAGAGTTGGAAG  50

seq1  GCCTGCAAACCCAACCCAGGGGATGTGCAGAATTCAGGGACAGCAGAACA  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCAAACCCAACCCAGGGGATGTGCAGAATTCAGGGACAGCAGAACA  100

seq1  TAGATGTCTTTGCAAGGAAAGA-CCCCTTTTTAATGGCC-TCCTACGGTG  146
      |||||||||||||||||||||| |||||||||||||||| ||||||||||
seq2  TAGATGTCTTTGCAAGGAAAGACCCCCTTTTTAATGGCCTTCCTACGGTG  150

seq1  CAATCTTGGTGACAGACTATGTAGGCGGGACCTCCTGCTCCCCAGTGACC  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTTGGTGACAGACTATGTAGGCGGGACCTCCTGCTCCCCAGTGACC  200

seq1  CTAACCAGTTTGCTACAGGTGGAGCCACATAGATCAGAGGAGGTAAAAGC  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACCAGTTTGCTACAGGTGGAGCCACATAGATCAGAGGAGGTAAAAGC  250

seq1  G-AAGACAG-AAAAGTAGCTGGGTCCTGATTTCCCACAAAGCAGGTGCCC  294
      | ||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGACAGAAAAAGTAGCTGGGTCCTGATTTCCCACAAAGCAGGTGCCC  300

seq1  AGATGGCTCCACGTTTCTGGGCAGATGTAGGCTTGGACCACATATGTGCT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGCTCCACGTTTCTGGGCAGATGTAGGCTTGGACCACATATGTGCT  350

seq1  CAGCTCAGGAAGACCAGGCTGCCTCTGTCTCCCCTGTGGGGGACCCACTG  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCAGGAAGACCAGGCTGCCTCTGTCTCCCCTGTGGGGGACCCACTG  400

seq1  ACCCACGCTTGCTCGCTTCTTAGTGGCACTGGGATGTTTCACAACTATGA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACGCTTGCTCGCTTCTTAGTGGCACTGGGATGTTTCACAACTATGA  450

seq1  GGCTATAATGACATGGGGAGAGGGGTAGCAACACAGCCTACAACAGTGTT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTATAATGACATGGGGAGAGGGGTAGCAACACAGCCTACAACAGTGTT  500

seq1  TTATTCCTTCGATGTTACAGAAGAGAAGGGGGGTCTGTGCACATCACACA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCCTTCGATGTTACAGAAGAGAAGGGGGGTCTGTGCACATCACACA  550

seq1  TCACACAGAACATTCCACAGGTGACCACGGAGGTAGCAAACCCCAGAGAT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACAGAACATTCCACAGGTGACCACGGAGGTAGCAAACCCCAGAGAT  600

seq1  GGTGAGATGGAAGCCCACTGCCTCAGGGAACCCAGAGTCCCTTAACTCAG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAGATGGAAGCCCACTGCCTCAGGGAACCCAGAGTCCCTTAACTCAG  650

seq1  AAAGCTTCTGCTGTCTGGCTTCACAGAGAGAAACACCTGCCCTGCCCCCT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTTCTGCTGTCTGGCTTCACAGAGAGAAACACCTGCCCTGCCCCCT  700

seq1  CAAGCTCATGAACGAATGCCTCACTTCCTCCCTCCTAGGGACCTCAAAGG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTCATGAACGAATGCCTCACTTCCTCCCTCCTAGGGACCTCAAAGG  750

seq1  TCCCAAAGAAGCAGACTTCTAAAAAAAACAAAAAACAAAAAACCCGTCTT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAAGAAGCAGACTTCTAAAAAAAACAAAAAACAAAAAACCCGTCTT  800

seq1  TCTGTCTGATTCTGGCCTCTCGATGTCAGACAGGCATCCAGGGACAAAAC  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTGATTCTGGCCTCTCGATGTCAGACAGGCATCCAGGGACAAAAC  850

seq1  TAAACTCTACATTTGCTGTCAAATGTCAAAGAGTTCTGCCTCCTTCTCCT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTCTACATTTGCTGTCAAATGTCAAAGAGTTCTGCCTCCTTCTCCT  900

seq1  TCCAAAAGGAGAAGCTGCGGTCAATATAGCGGCAAATGGCCTCATTACTG  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAAAGGAGAAGCTGCGGTCAATATAGCGGCAAATGGCCTCATTACTG  950

seq1  AATTC  949
      |||||
seq2  AATTC  955

seq1: chr4_151375394_151376244
seq2: B6Ng01-210H10.g_66_928

seq1  GAATTCACTTTGTAGACTAGGTTGCCCTCAAATTCAGAAATCTGCCTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTTGTAGACTAGGTTGCCCTCAAATTCAGAAATCTGCCTGCC  50

seq1  TCTACCAACCAAGTGCTGGGATTAAAGGCGTGTGCCACCACTGCCCCGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACCAACCAAGTGCTGGGATTAAAGGCGTGTGCCACCACTGCCCCGCT  100

seq1  ATAAAATTAAGTTTTTAAAATGTTTTTGTTGGGGCTGGAGAGATGGCTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATTAAGTTTTTAAAATGTTTTTGTTGGGGCTGGAGAGATGGCTCC  150

seq1  GTGGTTAAGAGCACTGACTGCTCTTTCAGAGGTCCTGATTTCAATCCCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTAAGAGCACTGACTGCTCTTTCAGAGGTCCTGATTTCAATCCCCA  200

seq1  GCAACCACATGGTAACTCACAACCATATATAGTGTAATGCCCTCTTCTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACCACATGGTAACTCACAACCATATATAGTGTAATGCCCTCTTCTGG  250

seq1  CATGCAGGCATACATGCAGGTAGAGTGTTTATATACATTAAATAAATAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCAGGCATACATGCAGGTAGAGTGTTTATATACATTAAATAAATAAG  300

seq1  TAAAAATGTTTTTATTGTATGTGTATTTACAGATATTGTGTCTGTGTATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATGTTTTTATTGTATGTGTATTTACAGATATTGTGTCTGTGTATA  350

seq1  TCTGTATACCACATGTGTGCTTGGGGCATCTGGAGTCCAGAAGAAAGGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTATACCACATGTGTGCTTGGGGCATCTGGAGTCCAGAAGAAAGGTA  400

seq1  TCAGATCTCCTGAAACTGGACTTAGGAAAGGTTGTGTGCGGCCATGTGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATCTCCTGAAACTGGACTTAGGAAAGGTTGTGTGCGGCCATGTGGG  450

seq1  TGCTGGCAATCAAACCCAGGTTCTCAAGTCCATGCTGTTAACCACTGAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGCAATCAAACCCAGGTTCTCAAGTCCATGCTGTTAACCACTGAGC  500

seq1  AATCTCTGCAGCTGTTTAAAAAAAAAAAAGGGCTGTCCTGGGCTGGAGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCTGCAGCTGTTTAAAAAAAAAAAAGGGCTGTCCTGGGCTGGAGGC  550

seq1  AGTGCACACCTTTAGTCCCAGCACTCAGGACACAGGCAGGTGGATCGACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCACACCTTTAGTCCCAGCACTCAGGACACAGGCAGGTGGATCGACA  600

seq1  TGAGTTTGAAGCCAGCCTGGTCTGCAGAGTGAGCTCTAGGGCAGCCGCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTTGAAGCCAGCCTGGTCTGCAGAGTGAGCTCTAGGGCAGCCGCAG  650

seq1  CTATATGGAGAGACCCCCTCTCGAAG-AAAAAACACTGAGAC-AAAACCC  698
      |||||||||||||||||||||||||| ||||||||||||||| |||||||
seq2  CTATATGGAGAGACCCCCTCTCGAAGAAAAAAACACTGAGACAAAAACCC  700

seq1  AAGGGGACAG-TTTTCACAACGA-TCCAGGTTA-CCTCGTGCCTATCT-A  744
      |||||||||| |||||||||||| ||||||||| |||||||||||||| |
seq2  AAGGGGACAGTTTTTCACAACGATTCCAGGTTACCCTCGTGCCTATCTAA  750

seq1  AAATCAGAATTTGAACACCAAATGAAGTGCCTTATCTTTCTTTT--AACC  792
      ||||||||||||||||||||||||||||||||||||||||||||  | ||
seq2  AAATCAGAATTTGAACACCAAATGAAGTGCCTTATCTTTCTTTTTAACCC  800

seq1  AGGGATCA-CCAGGCAAGCAGCTTGGAGTGTAAGTTAA-TTGTGTTA-GG  839
      |||||||| ||| ||||||||||||||||| ||||||| |||||||| ||
seq2  AGGGATCACCCATGCAAGCAGCTTGGAGTGAAAGTTAATTTGTGTTATGG  850

seq1  GGTAGT-TTTGCT  851
      |||||| |||| |
seq2  GGTAGTCTTTGTT  863