BAC Information

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BAC

Clone NameB6Ng01-211C15
Chromosome4 (Build37)
Map Location 47,736,335 - 47,838,367
singlet/doubletdoublet
Overlap genenone
Upstream geneGabbr2, Anks6, LOC435781, Galnt12, Col15a1, Tgfbr1, LOC666236, LOC666473, Alg2, Sec61b
Downstream geneLOC100040788, Nr4a3, Stx17, Txndc4, Invs, Tex10, 5730528L13Rik, Tmeff1, 2310039E09Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-211C15.bB6Ng01-211C15.g
ACCGA029315GA029316
length1,161222
definitionB6Ng01-211C15.b B6Ng01-211C15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(47,837,198 - 47,838,367)(47,736,335 - 47,736,556)
sequence
gaattctcacttgatcctatgtgagaatcctgtatgctctcttagcacag
atgtttagatggaaatggtagctggggagtatcgggagttgtcagttttt
gactcatgcaccctggcttatccctctgccgctctgtatgagtttcctat
aattgtgataagtaattgccacaactactgtggcttaaaaatatgacacc
gtccatttctaaacatctcacatccaaaatggctctcattaggctaatag
caaactggcaacatggccgcattccttccaaggactctagaaggatctac
ttgctatttctagttgctgtgtcccatttctttccctattctaaaaccag
agactttgtgtgatgtcctccccatcttgtcggcgctttcttctctgcat
tgatcttccatgtttaagcacctttgtgcaatgagctcttctaaatttct
ggtttttaatcatacagccagatactgcaacccatacacagtcaacattt
gaccaagaccgtgctagtgcaccatgcagaaatgaagcggccgtgagtcc
tgctgctgttagttctgggcttgggcaaatctgttctatttctttccatt
tgactggtatttgaagtgtgcctgggacgtgtccagtcctagaacacatg
gtgatggacacgaggagcgaaataaatcactgctctcaaataaccttcaa
cgtgtacctctcttaaactttaggcttcttctacaaaatagcaacacgaa
ttatatagatcccaaaaggacatgcaagtgaattgtaaaaagcaattcaa
atgtgagaactttgctattttaagtgttaacagttttcctaaaaagataa
gcagccgaggaagacgatgcatctttgtgaactttcctttcatcctgtaa
gtacagtttatgatatgaccacacctttgccaaagaaactcttcctttct
gtttctagatgttccctcagatccagggaggtaattatacccctgtcttt
gcagggggtatccactttccaaagccgagctaatggatatttctagtctg
gtgaactggcaatacgattccttgatccattcgcccagtgcggaccattt
attatttggattcattgcatctgagaaaatatcactggaatgcagcttct
ctgagcctaat
ttcgctggcagacttctgagcatctaggttctaaatttttaaaatatgtc
ttcctagtgctttgggataaaagacttcccatgtcaccaaacaaaggctt
cactattccctaagaggtctgcatagctcacaaagctagaaagcatctct
taagggaaaacttggacagcaataggctaaattgtgtgtgtgtgtgtgtg
tgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_47837198_47838367
seq2: B6Ng01-211C15.b_46_1206 (reverse)

seq1  ATTA-GCTCAGAGAAGACCCTGGCACT-CAGTGATATTTCTTCAAGATGG  48
      |||| |||||||||||   || ||| | |||||||||||  || ||||| 
seq2  ATTAGGCTCAGAGAAG---CT-GCATTCCAGTGATATTTTCTC-AGATGC  45

seq1  CATGAAATTCCAAAT-ATAAATTGGGTCCGCACTGGGCG-ATGATTCAAG  96
       |||||  ||||||| ||||||  ||||||||||||||| |||  |||||
seq2  AATGAA--TCCAAATAATAAAT--GGTCCGCACTGGGCGAATGGATCAAG  91

seq1  AAATCGTATTGGCCAGTTCACAAGACTAGAAATATCCATTAGCTCGGCTT  146
       ||||||||| |||||||||| ||||||||||||||||||||||||||||
seq2  GAATCGTATT-GCCAGTTCACCAGACTAGAAATATCCATTAGCTCGGCTT  140

seq1  TGGAAAGTGGATTACCCCCTGCAAAGACAGGGGTATAATTACCTCCCTGG  196
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAGTGGA-TACCCCCTGCAAAGACAGGGGTATAATTACCTCCCTGG  189

seq1  ATCCTGAGGGAACATCTAGAAACAGAAAGGAAGAGTTTCTTTGGCAAAGG  246
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AT-CTGAGGGAACATCTAGAAACAGAAAGGAAGAGTTTCTTTGGCAAAGG  238

seq1  TGTGGTCATATCATAAACTGTACTTACAGGATGAAAGGAAAGTTCACAAA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTCATATCATAAACTGTACTTACAGGATGAAAGGAAAGTTCACAAA  288

seq1  GATGCATCGTCTTCCTCGGCTGCCTTATCTTTTTAGGAAAACTGTTAACA  346
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GATGCATCGTCTTCCTCGGCTG-CTTATCTTTTTAGGAAAACTGTTAACA  337

seq1  CTTAAAATAGCAAAGTTCTCACATTTGAATTGCTTTTTACAATTCACTTG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAATAGCAAAGTTCTCACATTTGAATTGCTTTTTACAATTCACTTG  387

seq1  CATGTCCTTTTGGGATCTATATAATTCGTGTTGCTATTTTGTAGAAGAAG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTCCTTTTGGGATCTATATAATTCGTGTTGCTATTTTGTAGAAGAAG  437

seq1  CCTAAAGTTTAAGAGAGGTACACGTTGAAGGTTATTTGAGAGCAGTGATT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAAGTTTAAGAGAGGTACACGTTGAAGGTTATTTGAGAGCAGTGATT  487

seq1  TATTTCGCTCCTCGTGTCCATCACCATGTGTTCTAGGACTGGACACGTCC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCGCTCCTCGTGTCCATCACCATGTGTTCTAGGACTGGACACGTCC  537

seq1  CAGGCACACTTCAAATACCAGTCAAATGGAAAGAAATAGAACAGATTTGC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCACACTTCAAATACCAGTCAAATGGAAAGAAATAGAACAGATTTGC  587

seq1  CCAAGCCCAGAACTAACAGCAGCAGGACTCACGGCCGCTTCATTTCTGCA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGCCCAGAACTAACAGCAGCAGGACTCACGGCCGCTTCATTTCTGCA  637

seq1  TGGTGCACTAGCACGGTCTTGGTCAAATGTTGACTGTGTATGGGTTGCAG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGCACTAGCACGGTCTTGGTCAAATGTTGACTGTGTATGGGTTGCAG  687

seq1  TATCTGGCTGTATGATTAAAAACCAGAAATTTAGAAGAGCTCATTGCACA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGGCTGTATGATTAAAAACCAGAAATTTAGAAGAGCTCATTGCACA  737

seq1  AAGGTGCTTAAACATGGAAGATCAATGCAGAGAAGAAAGCGCCGACAAGA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTGCTTAAACATGGAAGATCAATGCAGAGAAGAAAGCGCCGACAAGA  787

seq1  TGGGGAGGACATCACACAAAGTCTCTGGTTTTAGAATAGGGAAAGAAATG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGAGGACATCACACAAAGTCTCTGGTTTTAGAATAGGGAAAGAAATG  837

seq1  GGACACAGCAACTAGAAATAGCAAGTAGATCCTTCTAGAGTCCTTGGAAG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACACAGCAACTAGAAATAGCAAGTAGATCCTTCTAGAGTCCTTGGAAG  887

seq1  GAATGCGGCCATGTTGCCAGTTTGCTATTAGCCTAATGAGAGCCATTTTG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGCGGCCATGTTGCCAGTTTGCTATTAGCCTAATGAGAGCCATTTTG  937

seq1  GATGTGAGATGTTTAGAAATGGACGGTGTCATATTTTTAAGCCACAGTAG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGAGATGTTTAGAAATGGACGGTGTCATATTTTTAAGCCACAGTAG  987

seq1  TTGTGGCAATTACTTATCACAATTATAGGAAACTCATACAGAGCGGCAGA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGGCAATTACTTATCACAATTATAGGAAACTCATACAGAGCGGCAGA  1037

seq1  GGGATAAGCCAGGGTGCATGAGTCAAAAACTGACAACTCCCGATACTCCC  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATAAGCCAGGGTGCATGAGTCAAAAACTGACAACTCCCGATACTCCC  1087

seq1  CAGCTACCATTTCCATCTAAACATCTGTGCTAAGAGAGCATACAGGATTC  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTACCATTTCCATCTAAACATCTGTGCTAAGAGAGCATACAGGATTC  1137

seq1  TCACATAGGATCAAGTGAGAATTC  1170
      ||||||||||||||||||||||||
seq2  TCACATAGGATCAAGTGAGAATTC  1161

seq1: chr4_47736335_47736556
seq2: B6Ng01-211C15.g_71_292

seq1  TTCGCTGGCAGACTTCTGAGCATCTAGGTTCTAAATTTTTAAAATATGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGCTGGCAGACTTCTGAGCATCTAGGTTCTAAATTTTTAAAATATGTC  50

seq1  TTCCTAGTGCTTTGGGATAAAAGACTTCCCATGTCACCAAACAAAGGCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAGTGCTTTGGGATAAAAGACTTCCCATGTCACCAAACAAAGGCTT  100

seq1  CACTATTCCCTAAGAGGTCTGCATAGCTCACAAAGCTAGAAAGCATCTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTATTCCCTAAGAGGTCTGCATAGCTCACAAAGCTAGAAAGCATCTCT  150

seq1  TAAGGGAAAACTTGGACAGCAATAGGCTAAATTGTGTGTGTGTGTGTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGGAAAACTTGGACAGCAATAGGCTAAATTGTGTGTGTGTGTGTGTG  200

seq1  TGTGTGTGTGTGTGTGTGTGTG  222
      ||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTG  222