BAC Information

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BAC

Clone NameB6Ng01-211M20
Chromosome4 (Build37)7 (Build37)
Map Location 35,610,406 - 35,610,7427,381,789 - 7,382,522
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSlc35a1, 1700003M02Rik, Gm136, 1810030N24Rik, Zfp292, Cga, Mobkl2b, Ifnk, 3110043O21Rik, LOC620559, LOC621227
Downstream geneLingo2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-211M20.bB6Ng01-211M20.g
ACCGA029762GA029763
length781735
definitionB6Ng01-211M20.b B6Ng01-211M20.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(35,610,406 - 35,610,742)(7,381,789 - 7,382,522)
sequence
gaattcaaggcccatacctaaacaagataaaagcaatctacagcaaacca
atagccaacagataagtaaatggtgagaagctggaagcaatcccactaaa
atcagggactagacaaggcttcccactttctctctacctattcaacattg
tactagccagagcaatttgacaacaaaaggagatcaaggggatacaaatt
ggaaaagaagttaagttatcactttttgcagatgatatgataatatatat
aagtgacactaaaaatttcaccagagaactcctaaacctgataaatagct
tcagtgaaggagctggatataaaattaactcaaacaagtcaatggtcttt
ctctacacaaagaataaacaggctgagaaagaaattagggaaaccacacg
ctactcaattgtcacaaataatataaaatactttggcatgactctaacta
aggaaatgaaagatctgtatgataagaacttcaagtctctgatgaaagaa
attaaagaaggtctcagaagaaggaaagttctcccatctcatggattgcc
tagctcaacattgtaaaaatggctatcttgccaaaagcaatctacagatt
cagtgcaatccccatcaaaattccaactcaattcttcaaggaatttgaaa
gagcaattttttttttttttttttaatggtacaaaaagttgttttattga
gatctagagtcacacagtcaactttatgctgttagagttgaagtttcttc
ctaaagcgggacctagtctatagccatataa

gaattcacagattagcaatgaaaatgtgtggttttatacagagcacacaa
atatctattagcatgccccttccaatattggatataaacagtctttcctc
attaattttctccatgattagaagatgagtttatatttatatttctcaat
tatatggaaatcatttggaggaattattttcattagtgtttccagtgatt
ttgccaagagtgtaggctttggagaacattctggtttttctgagagtaac
taaacaagaaatagtgttggtatccttttctgtctgtatatgtgtttata
aatgtgaatgtatgcttctcactgagtatatgtatattttctactcttat
gtgtatctgcgtttatatttgtgttactttcaacatatatgtttatctct
ctgtatgaaagtagaagtgagcaaaaattttttctatgtaggaatttctt
tctataagtgtttgtttatatgtgtgcatgtttctttgaggttttgtcag
agtaggtttcattgtgtagaaagtatgtatttttaagtgtttttaagtac
ttatatatatttgtacctgctttactaagtatgtgtctgcctatttcttt
gtacttgtcaaggcctctggctttctttttgtctttaggtgtgagtataa
aaatctctgtgtgtcaatattacctctccccgtgttttttctgtcagtct
ctctctctctctctctctctctctctctctctctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_35610406_35610742
seq2: B6Ng01-211M20.b_149_473 (reverse)

seq1  ATTATTTGTGACTATTGAGAAGGGTGTTGTTTCCCTAATTTCTTTCTCAG  50
      |||||||||||| |||||| || |||| ||||||||||||||||||||||
seq2  ATTATTTGTGACAATTGAGTAGCGTGTGGTTTCCCTAATTTCTTTCTCAG  50

seq1  CCTGTTTATTCTTTGTGTAGAGAAAGGCCATTGACTTGTTTGAGTTAATT  100
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CCTGTTTATTCTTTGTGTAGAGAAAGACCATTGACTTGTTTGAGTTAATT  100

seq1  TTATATCCAGCTACTTCACTGAAGCTGTTTATCAGGTTTAGGAGTTCTCT  150
      |||||||||||| ||||||||||||| |||||||||||||||||||||||
seq2  TTATATCCAGCTCCTTCACTGAAGCTATTTATCAGGTTTAGGAGTTCTCT  150

seq1  GGTAGAATTTTTAGGGTCACTTATATATACTATCATATCATCTGCAAAAA  200
      |||  ||||||||| |||||||||||||| ||||||||||||||||||||
seq2  GGTGAAATTTTTAGTGTCACTTATATATATTATCATATCATCTGCAAAAA  200

seq1  GTTATATTTTGACTTCATCTTTTCCAATTTGTATCCCCTTGATCCCCTTT  250
      || |||  || |||   ||||||||||||||||||||||||||| |||||
seq2  GTGATAACTTAACT---TCTTTTCCAATTTGTATCCCCTTGATCTCCTTT  247

seq1  TGTTGTCAAATTGCTCTGGCTAGGACTTCAAGTACAATGTTGAATAGATA  300
      |||||||||||||||||||||         ||||||||||||||||| ||
seq2  TGTTGTCAAATTGCTCTGGCT---------AGTACAATGTTGAATAGGTA  288

seq1  GGGAGAAAGTGGGCAGCCTTGTCTAGTCCCTGATTTT  337
      | ||||||||||| |||||||||||||||||||||||
seq2  GAGAGAAAGTGGGAAGCCTTGTCTAGTCCCTGATTTT  325


seq1: chr7_7381789_7382522
seq2: B6Ng01-211M20.g_69_803 (reverse)

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACTGACAG-AAAA  49
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACTGACAGAAAAA  50

seq1  ACACGGGGAGAGGTAATATTGACACACAGAGATTTTTATACTCACACCTA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACGGGGAGAGGTAATATTGACACACAGAGATTTTTATACTCACACCTA  100

seq1  AAGACAAAAAGAAAGCCAGAGGCCTTGACAAGTACAAAGAAATAGGCAGA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAAAAAGAAAGCCAGAGGCCTTGACAAGTACAAAGAAATAGGCAGA  150

seq1  CACATACTTAGTAAAGCAGGTACAAATATATATAAGTACTTAAAAACACT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATACTTAGTAAAGCAGGTACAAATATATATAAGTACTTAAAAACACT  200

seq1  TAAAAATACATACTTTCTACACAATGAAACCTACTCTGACAAAACCTCAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATACATACTTTCTACACAATGAAACCTACTCTGACAAAACCTCAA  250

seq1  AGAAACATGCACACATATAAACAAACACTTATAGAAAGAAATTCCTACAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACATGCACACATATAAACAAACACTTATAGAAAGAAATTCCTACAT  300

seq1  AGAAAAAATTTTTGCTCACTTCTACTTTCATACAGAGAGATAAACATATA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAAATTTTTGCTCACTTCTACTTTCATACAGAGAGATAAACATATA  350

seq1  TGTTGAAAGTAACACAAATATAAACGCAGATACACATAAGAGTAGAAAAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGAAAGTAACACAAATATAAACGCAGATACACATAAGAGTAGAAAAT  400

seq1  ATACATATACTCAGTGAGAAGCATACATTCACATTTATAAACACATATAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATATACTCAGTGAGAAGCATACATTCACATTTATAAACACATATAC  450

seq1  AGACAGAAAAGGATACCAACACTATTTCTTGTTTAGTTACTCTCAGAAAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGAAAAGGATACCAACACTATTTCTTGTTTAGTTACTCTCAGAAAA  500

seq1  ACCAGAATGTTCTCCAAAGCCTACACTCTTGGCAAAATCACTGGAAACAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGAATGTTCTCCAAAGCCTACACTCTTGGCAAAATCACTGGAAACAC  550

seq1  TAATGAAAATAATTCCTCCAAATGATTTCCATATAATTGAGAAATATAAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAAAATAATTCCTCCAAATGATTTCCATATAATTGAGAAATATAAA  600

seq1  TATAAACTCATCTTCTAATCATGGAGAAAATTAATGAGGAAAGACTGTTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAACTCATCTTCTAATCATGGAGAAAATTAATGAGGAAAGACTGTTT  650

seq1  ATATCCAATATTGGAAGGGGCATGCTAATAGATATTTGTGTGCTCTGTAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCCAATATTGGAAGGGGCATGCTAATAGATATTTGTGTGCTCTGTAT  700

seq1  AAAACCACACATTTTCATTGCTAATCTGTGAATTC  734
      |||||||||||||||||||||||||||||||||||
seq2  AAAACCACACATTTTCATTGCTAATCTGTGAATTC  735


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