BAC Information

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BAC

Clone NameB6Ng01-212H03
Chromosome4 (Build37)
Map Location 12,810,383 - 12,811,463
singlet/doubletsinglet
Overlap genenone
Upstream genePpm2c, Tmem67, C430048L16Rik, LOC230010, LOC623671, LOC100039958, Rbm12b, 6720467C03Rik, LOC545592
Downstream geneOTTMUSG00000004461, LOC100039988, Runx1t1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-212H03.bB6Ng01-212H03.g
ACCGA030238GA030239
length1,2191,087
definitionB6Ng01-212H03.b B6Ng01-212H03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattatcttaccaagacttttatcatgaatgggtgttggatattc
tcaaatgctttttctgcatctaatgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggatgttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatcgatgattgct
ttaatatgttcttggattcggttagcgagaattttattgagtatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtgttttaggtatcagagtaattgtggcttcataaaatgagttg
ggtagagttcattctgcttctattttgtggaatagtttgtgaagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggctgggagactattaataactgcttctatttct
ttaggggatatgggactgtttagatccttatctttatcctgatttaattt
ggtacctggtatctgtccagaaatttgtccatttcgtccaggttttccag
ttttgttgagtatagccttttgtagaaggatctgatggtgttttggattt
cttcagaatctgttgctatgcctcccttttcatttctgattttgttaatt
aggattttgtccctgtgtcctctagtgagtctagctaagggtttatctat
cttgttgattttctcaaagaaccaaatcctcgtttggttaattctttgaa
tagttcttcttgtttccacttggttgatttcatccctgagtttgattatt
tcctgccatctactcctctttggtgaattttcttccttttttttttctaa
agattttagatgtgttgtccagcctgctagtgtgtgcctctctccagttc
cttcttggaggcactcagagctatgagtttcccctcttagaaatgctttc
attgcgtcccacaggttgggtattgtgtgccttcattttccttaaactct
taaaggtctttaatttcttcttttatccatcctgaccaaggtatcatgtc
gagagtcttatcagcttcacggtgaagttgctttccatatattaggtggt
atggaaatacgtcttagccatgaggcccttgacatagggcacgtgagggc
acatttcatcatacatcgt
gaattcagagcctctctgcaccacagggtcacactgtatttgagaaagca
atgcttaaagggacaggtcactttgactttgagggatgctttgcttatct
gcgtgatcttactgagggatttttctttttctttttggcgcttcagtatc
tcagtgatcagaaattcagcaagtagaaaagaagctaattaaaagcagaa
aacacttaggaaagttaatcctgaagactgatttagaagaagataggttt
gctctcccagtgtgcttcctatctttgttattgcctggctatacattgtc
tttgtttttagaaacatcatctcttatgcacatcaacacatctgtcgcat
ccggtcttagtacggtttaactctatgttccacaagttagtataagacag
ctgaattatgttattaataaacatgaaataattaaattaacatatctttc
ttcataactgcacgaatttacagtattgaggatcttaaaatatatgttct
aagcaattttaaatatataataataattattatcacaattatgcattaat
gttgtatatgcatatttacaaatatgtgttggtacatgtattcatgtgta
cctattctgacagacgccccagactgtcatcaggaatcttactttattat
atcctaccttactcattttgaggcagggtatctaaactccaatgcaagtt
tgccaatatagccattcacgctagccagcttactctgaggatccctatct
ctgccttctgagcattggaggttctggtgggctgtcatgagtgccagaca
tttacatgggagataggagttctaaactccaatcttatgttgtataacaa
ttgctttctccactgagttttctctacagctctaagacagaaactactga
ctatagctctcatgatctgcagtagatattaaaaactttagtcctgccaa
gatgaaagattggtgcttttctgtccaacatttccctggtttcttttctc
tccatccctctggcccatatcctggtaaccaccattctactctacatgaa
tttgacatttaagaattttataaataaattaaatatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_12810383_12811463
seq2: B6Ng01-212H03.g_65_1151

seq1  GAATTCAGAGCCTCTCTGCACCACAGGGTCACACTGTATTTGAGAAAGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAGCCTCTCTGCACCACAGGGTCACACTGTATTTGAGAAAGCA  50

seq1  ATGCTTAAAGGGACAGGTCACTTTGACTTTGAGGGATGCTTTGCTTATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTAAAGGGACAGGTCACTTTGACTTTGAGGGATGCTTTGCTTATCT  100

seq1  GCGTGATCTTACTGAGGGATTTTTCTTTTTCTTTTTGGCGCTTCAGTATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTGATCTTACTGAGGGATTTTTCTTTTTCTTTTTGGCGCTTCAGTATC  150

seq1  TCAGTGATCAGAAATTCAGCAAGTAGAAAAGAAGCTAATTAAAAGCAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGATCAGAAATTCAGCAAGTAGAAAAGAAGCTAATTAAAAGCAGAA  200

seq1  AACACTTAGGAAAGTTAATCCTGAAGACTGATTTAGAAGAAGATAGGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTTAGGAAAGTTAATCCTGAAGACTGATTTAGAAGAAGATAGGTTT  250

seq1  GCTCTCCCAGTGTGCTTCCTATCTTTGTTATTGCCTGGCTATACATTGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCCCAGTGTGCTTCCTATCTTTGTTATTGCCTGGCTATACATTGTC  300

seq1  TTTGTTTTTAGAAACATCATCTCTTATGCACATCAACACATCTGTCGCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTTTAGAAACATCATCTCTTATGCACATCAACACATCTGTCGCAT  350

seq1  CCGGTCTTAGTACGGTTTAACTCTATGTTCCACAAGTTAGTATAAGACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGTCTTAGTACGGTTTAACTCTATGTTCCACAAGTTAGTATAAGACAG  400

seq1  CTGAATTATGTTATTAATAAACATGAAATAATTAAATTAACATATCTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATTATGTTATTAATAAACATGAAATAATTAAATTAACATATCTTTC  450

seq1  TTCATAACTGCACGAATTTACAGTATTGAGGATCTTAAAATATATGTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATAACTGCACGAATTTACAGTATTGAGGATCTTAAAATATATGTTCT  500

seq1  AAGCAATTTTAAATATATAATAATAATTATTATCACAATTATGCATTAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAATTTTAAATATATAATAATAATTATTATCACAATTATGCATTAAT  550

seq1  GTTGTATATGCATATTTACAAATATGTGTTGGTACATGTATTCATGTGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTATATGCATATTTACAAATATGTGTTGGTACATGTATTCATGTGTA  600

seq1  CCTATTCTGACAGACGCCCCAGACTGTCATCAGGAATCTTACTTTATTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTCTGACAGACGCCCCAGACTGTCATCAGGAATCTTACTTTATTAT  650

seq1  ATCCTACCTTACTCATTTTGAGGCAGGGTATCTAAACTCCAATGCAAGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTACCTTACTCATTTTGAGGCAGGGTATCTAAACTCCAATGCAAGTT  700

seq1  TGCCAATATAGCCATTCACGCTAGCCAGCTTACTCTGAGGATCCCTATCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAATATAGCCATTCACGCTAGCCAGCTTACTCTGAGGATCCCTATCT  750

seq1  CTGCCTTCTGAGCATTGGAGGTTCTGGTGGGCTGTCATGAGTGCCAGACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTTCTGAGCATTGGAGGTTCTGGTGGGCTGTCATGAGTGCCAGACA  800

seq1  TTTACATGGGAGATAGGAGTTCTAAACTCCAATCTTATGTTGTATAACAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACATGGGAGATAGGAGTTCTAAACTCCAATCTTATGTTGTATAACAA  850

seq1  TTGCTTTCTCCACTGAGTTTTCTCTACAGCTCTAAGACAGAAACTACTGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTTCTCCACTGAGTTTTCTCTACAGCTCTAAGACAGAAACTACTGA  900

seq1  CTATAGCTCTCATGATCTGCAGTAGATATTAAAAAC-TTAGTCCTGCCAA  949
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CTATAGCTCTCATGATCTGCAGTAGATATTAAAAACTTTAGTCCTGCCAA  950

seq1  GATGAAAGATT-GTGC-TTTCTGTCCAACATTTCCCT-GTTTCTTTTCTC  996
      ||||||||||| |||| |||||||||||||||||||| ||||||||||||
seq2  GATGAAAGATTGGTGCTTTTCTGTCCAACATTTCCCTGGTTTCTTTTCTC  1000

seq1  TCCATCCCTCT-GCCCATATCCTGGTAACCACCATTCTACTCTACATGAA  1045
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TCCATCCCTCTGGCCCATATCCTGGTAACCACCATTCTACTCTACATGAA  1050

seq1  TTTGACATTTTAAGATTTTATAAATAAA-TAAATATT  1081
      |||||||||| |  |||||||||||||| ||||||||
seq2  TTTGACATTTAAGAATTTTATAAATAAATTAAATATT  1087