BAC Information

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BAC

Clone NameB6Ng01-212K21
Chromosome4 (Build37)
Map Location 146,706,796 - 146,872,746
singlet/doubletdoublet
Overlap geneLOC666581, EG666588, LOC627701
Upstream geneLOC433790, LOC433791, Rex2, LOC100043012, LOC100041461, LOC630093, OTTMUSG00000010105, LOC666445, MGC117846, OTTMUSG00000010694, LOC626480, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498, LOC100043034, LOC666514, LOC100041561, LOC100041570, OTTMUSG00000010657, LOC384087, LOC666546, LOC666557, LOC545716, LOC666574
Downstream geneOTTMUSG00000010671, LOC545718, OTTMUSG00000010673, 2610305D13Rik, LOC666618, LOC100043100, LOC666640, LOC194189, LOC666652, LOC100041677, LOC277692, MGC67181, D4Wsu114e, Fv1, Mfn2, Plod1, 2510039O18Rik, Nppb, Nppa, Clcn6, Mthfr, LOC433806, Agtrap, 2610109H07Rik, Mad2l2, Fbxo6, Fbxo44, Fbxo2, Ptchd2, Ubiad1, Frap1, Angptl7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-212K21.bB6Ng01-212K21.g
ACCGA030416GA030417
length1,1511,109
definitionB6Ng01-212K21.b B6Ng01-212K21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(146,871,600 - 146,872,746)(146,706,796 - 146,707,691)
sequence
gaattcatgtcatattctgaaacctaatcaagaacaggaagtatgttagg
tcatgggaattatgaggccattttaagaaatggtatcatctaaaattatc
atagtcatattgtgttgtctcctttcagtaaaaggtagatgagttaatgg
actcagactcacagcatacatttagacattgtaatgtatatatttgaggt
ttagatgcaggaatatatctttatgaacacgtttttgataataagaacaa
ttccagtgttacatctagtttatagatagtaaagtgatggtgagtaaaac
tgtgcttccaaattctacaactatcagtattgttcaaataagaaccgagt
acctctcttgtctgaagttgggtgtcaacagcacgtctaaaatgctcagt
ttggattttaaggcctataaatagtagtgtatcctttctagaagaaagaa
atagagttcagaataccaaatacaagaatgacttaagagaaataattttt
tttctattgtagcagttaggaagtgtaaaatcagtgtatacaaacaaaat
tacaaacaagacatagaatcaaataccttgtgatgtgattgaataagaat
attttcatgaagaattaaatgattgtttaatgaagaattaatttgagaat
atttaatgatataaagttagcaataggtagcattaatataatgtaatatt
tttgactatatgacaaaatcaatacagataataatttgatgaattacaca
gtggtttcccttcagaatggttagacatacatgtataactaaatgacata
tgtgaaaaaaaaagtgatatagtagaatagtttttataatgggaaatgac
catattaagatgtataagaatcacactaatacttcattatttatggatac
tttattactcgtgaatctattactggcacaactgaaaatacaaaactttt
gaattcaccaatattcttctctttattatttgagctcattgatctaacat
gatatagattacataaaaaaagaatcatgtaaagttcttttgacttcatc
cctacttcttttcttaattatttgagcctcattccatctaacggttagcg
gttgaccatatatagtatcattagactgaagaaatgaactcagggttaac
t
gaattcatacaggagagaaaccttacaaatgcagtgaatgtggcaaatgc
tttactgaaaaaagcagtctgagaattcatcagagaattcatacaggaga
gaaaccttacaaatgcaatgaatgtggcaaatgctttactgaaaaaagca
gtctgagaattcatcagagaattcatacaggagagaaaccttacaaatgc
agtgaatgtggcaaatgctttactgtaaaaagcagtctgagaattcatca
gagaattcatacaggagagaaaccttacaaatgcagtgaatgtgacaaat
gctttaccaaacaatccaatcttagtattcatcagagaattcatacagga
gagaaaccttacaaatgcagtgaatgtgaaaaatgcttttcccgaaaatt
acatcttggtattcatcagagaattcatacaggagagagaccttacaaat
gcagtgaatgtgaaaaatgcttttcccgaaaattccatcttggtattcat
cagagaattcatacaggaaagaaaccttacaaatagattgtatgtgacaa
atacaatactcacaatgtcagtcttagaaatcatcagttatttcatacag
tagagaatctttataaatgaagtaaatgaggcaattctttaccaagatat
attatctcaaaattcattagagaatacttagagaagacaaacttttcaaa
tatattgtaggtatgaatcctttccttttggcctatttcctagactgtaa
cagtgaatacttacaggctagaaacttaactcatgcattgtatgaagaaa
tatctttgacttcatttcaagtcagagagaacatctaagaactttttagg
gtaaagtatttctgttggggaaaatggtgtattcttgacaacacttgagg
ctccacactagagaattagtatgattatgaaaatcttgtgaaaatattca
tgcatgtcaatcttaggtaatgtcaacttattttatgctgtgagaaactc
tgaaaatgtgaatgtagaaagccttttcatgaacaccttttttacttgtt
catccttcaacggtacagattgaggacaagttgggaggtcagaaggatag
gtattttat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_146871600_146872746
seq2: B6Ng01-212K21.b_47_1197 (reverse)

seq1  AGTTACCCCTGAG-TCATTTCTTCAGTCCTAATGATACT-TATATGTCCA  48
      ||||| ||||||| ||||||||||||| ||||||||||| ||||||  ||
seq2  AGTTAACCCTGAGTTCATTTCTTCAGT-CTAATGATACTATATATGGTCA  49

seq1  ACCGCTAACCGTTTTAGATGG-ATGA-GCTCAAATAATTAAGAAAAG-AG  95
      |||||||||||  |||||||| |||| |||||||||||||||||||| ||
seq2  ACCGCTAACCG--TTAGATGGAATGAGGCTCAAATAATTAAGAAAAGAAG  97

seq1  TAGGGATGAAGTC-AAAGAACTTTACATGATTC-TTTTTTATGTAATCTA  143
      ||||||||||||| ||||||||||||||||||| ||||||||||||||||
seq2  TAGGGATGAAGTCAAAAGAACTTTACATGATTCTTTTTTTATGTAATCTA  147

seq1  TAATCATGTTAGATCAATGAGCTCAAATAATAAAGAGAAGAATATTGGTG  193
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  T-ATCATGTTAGATCAATGAGCTCAAATAATAAAGAGAAGAATATTGGTG  196

seq1  AATTCAAAAGTTTTGTATTTTCAGTTGTGCCAGTAATAGATTCACGAGTA  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAAAAGTTTTGTATTTTCAGTTGTGCCAGTAATAGATTCACGAGTA  246

seq1  ATAAAGTATCCATAAATAATGAAGTATTAGTGTGATTCTTATACATCTTA  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGTATCCATAAATAATGAAGTATTAGTGTGATTCTTATACATCTTA  296

seq1  ATATGGTCATTT-CCATTATAAAAACTATTCTACTATATCACTTTTTTTT  342
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  ATATGGTCATTTCCCATTATAAAAACTATTCTACTATATCACTTTTTTTT  346

seq1  TCACATATGTCATTTAGTTATACATGTATGTCTAACCATTCTGAAGGGAA  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATATGTCATTTAGTTATACATGTATGTCTAACCATTCTGAAGGGAA  396

seq1  ACCACTGTGTAATTCATCAAATTATTATCTGTATTGATTTTGTCATATAG  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACTGTGTAATTCATCAAATTATTATCTGTATTGATTTTGTCATATAG  446

seq1  TCAAAAATATTACATTATATTAATGCTACCTATTGCTAACTTTATATCAT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAATATTACATTATATTAATGCTACCTATTGCTAACTTTATATCAT  496

seq1  TAAATATTCTCAAATTAATTCTTCATTAAACAATCATTTAATTCTTCATG  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATTCTCAAATTAATTCTTCATTAAACAATCATTTAATTCTTCATG  546

seq1  AAAATATTCTTATTCAATCACATCACAAGGTATTTGATTCTATGTCTTGT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATTCTTATTCAATCACATCACAAGGTATTTGATTCTATGTCTTGT  596

seq1  TTGTAATTTTGTTTGTATACACTGATTTTACACTTCCTAACTGCTACAAT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAATTTTGTTTGTATACACTGATTTTACACTTCCTAACTGCTACAAT  646

seq1  AGAAAAAAAATTATTTCTCTTAAGTCATTCTTGTATTTGGTATTCTGAAC  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAAAAATTATTTCTCTTAAGTCATTCTTGTATTTGGTATTCTGAAC  696

seq1  TCTATTTCTTTCTTCTAGAAAGGATACACTACTATTTATAGGCCTTAAAA  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTTCTTTCTTCTAGAAAGGATACACTACTATTTATAGGCCTTAAAA  746

seq1  TCCAAACTGAGCATTTTAGACGTGCTGTTGACACCCAACTTCAGACAAGA  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAACTGAGCATTTTAGACGTGCTGTTGACACCCAACTTCAGACAAGA  796

seq1  GAGGTACTCGGTTCTTATTTGAACAATACTGATAGTTGTAGAATTTGGAA  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTACTCGGTTCTTATTTGAACAATACTGATAGTTGTAGAATTTGGAA  846

seq1  GCACAGTTTTACTCACCATCACTTTACTATCTATAAACTAGATGTAACAC  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGTTTTACTCACCATCACTTTACTATCTATAAACTAGATGTAACAC  896

seq1  TGGAATTGTTCTTATTATCAAAAACGTGTTCATAAAGATATATTCCTGCA  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATTGTTCTTATTATCAAAAACGTGTTCATAAAGATATATTCCTGCA  946

seq1  TCTAAACCTCAAATATATACATTACAATGTCTAAATGTATGCTGTGAGTC  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAACCTCAAATATATACATTACAATGTCTAAATGTATGCTGTGAGTC  996

seq1  TGAGTCCATTAACTCATCTACCTTTTACTGAAAGGAGACAACACAATATG  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTCCATTAACTCATCTACCTTTTACTGAAAGGAGACAACACAATATG  1046

seq1  ACTATGATAATTTTAGATGATACCATTTCTTAAAATGGCCTCATAATTCC  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATGATAATTTTAGATGATACCATTTCTTAAAATGGCCTCATAATTCC  1096

seq1  CATGACCTAACATACTTCCTGTTCTTGATTAGGTTTCAGAATATGACATG  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGACCTAACATACTTCCTGTTCTTGATTAGGTTTCAGAATATGACATG  1146

seq1  AATTC  1147
      |||||
seq2  AATTC  1151

seq1: chr4_146706796_146707691
seq2: B6Ng01-212K21.g_278_1176

seq1  GCAAATGCTTTACTGTAAAAAGCAGTCTGAGAATTCATCAGAGAATTCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATGCTTTACTGTAAAAAGCAGTCTGAGAATTCATCAGAGAATTCAT  50

seq1  ACAGGAGAGAAACCTTACAAATGCAGTGAATGTGACAAATGCTTTACCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAGAGAAACCTTACAAATGCAGTGAATGTGACAAATGCTTTACCAA  100

seq1  ACAATCCAATCTTAGTATTCATCAGAGAATTCATACAGGAGAGAAACCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCCAATCTTAGTATTCATCAGAGAATTCATACAGGAGAGAAACCTT  150

seq1  ACAAATGCAGTGAATGTGAAAAATGCTTTTCCCGAAAATTACATCTTGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATGCAGTGAATGTGAAAAATGCTTTTCCCGAAAATTACATCTTGGT  200

seq1  ATTCATCAGAGAATTCATACAGGAGAGAGACCTTACAAATGCAGTGAATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATCAGAGAATTCATACAGGAGAGAGACCTTACAAATGCAGTGAATG  250

seq1  TGAAAAATGCTTTTCCCGAAAATTCCATCTTGGTATTCATCAGAGAATTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAATGCTTTTCCCGAAAATTCCATCTTGGTATTCATCAGAGAATTC  300

seq1  ATACAGGAAAGAAACCTTACAAATAGATTGTATGTGACAAATACAATACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGGAAAGAAACCTTACAAATAGATTGTATGTGACAAATACAATACT  350

seq1  CACAATGTCAGTCTTAGAAATCATCAGTTATTTCATACAGTAGAGAATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATGTCAGTCTTAGAAATCATCAGTTATTTCATACAGTAGAGAATCT  400

seq1  TTATAAATGAAGTAAATGAGGCAATTCTTTACCAAGATATATTATCTCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAATGAAGTAAATGAGGCAATTCTTTACCAAGATATATTATCTCAA  450

seq1  AATTCATTAGAGAATACTTAGAGAAGACAAACTTTTCAAATATATTGTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCATTAGAGAATACTTAGAGAAGACAAACTTTTCAAATATATTGTAG  500

seq1  GTATGAATCCTTTCCTTTTGGCCTATTTCCTAGACTGTAACAGTGAATAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGAATCCTTTCCTTTTGGCCTATTTCCTAGACTGTAACAGTGAATAC  550

seq1  TTACAGGCTAGAAACTTAACTCATGCATTGTATGAAGAAATATCTTTGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGGCTAGAAACTTAACTCATGCATTGTATGAAGAAATATCTTTGAC  600

seq1  TTCATTTCAGGTCAGAGAGAACATCTAAGAACTTTTTAGGGTAAAGTATT  650
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTCAAGTCAGAGAGAACATCTAAGAACTTTTTAGGGTAAAGTATT  650

seq1  TCTGTTGGGGAAAATGGTGTATTCTTGACAACACTTGAGGCTCCACACTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTGGGGAAAATGGTGTATTCTTGACAACACTTGAGGCTCCACACTA  700

seq1  GAGAATTAGTATGATTATGAAAATCTTGTGAAAATATTCATGCAATGTTC  750
      ||||||||||||||||||||||||||||||||||||||||||| ||||  
seq2  GAGAATTAGTATGATTATGAAAATCTTGTGAAAATATTCATGC-ATGT--  747

seq1  AAATCTTAGGTAATGTCAACT--ATTTATGCTGTGAGAAACTCTGAAAAT  798
       ||||||||||||||||||||   ||||||||||||||||||||||||||
seq2  CAATCTTAGGTAATGTCAACTTATTTTATGCTGTGAGAAACTCTGAAAAT  797

seq1  GTGAAATGTAGAAAG-CTTTTCATG-ACACC-TTTTTACTTGTTCATCCT  845
      ||| ||||||||||| ||||||||| ||||| ||||||||||||||||||
seq2  GTG-AATGTAGAAAGCCTTTTCATGAACACCTTTTTTACTTGTTCATCCT  846

seq1  CAAACGTTACCAGA-TGAAGACAAGTTGGGAAGTCAGAA-GATA-GTATT  892
        |||| || |||| ||| |||||||||||| ||||||| |||| |||||
seq2  TCAACGGTA-CAGATTGAGGACAAGTTGGGAGGTCAGAAGGATAGGTATT  895

seq1  TTAT  896
      ||||
seq2  TTAT  899