BAC Information

Click to search

BAC

Clone NameB6Ng01-212O20
Chromosome4 (Build37)
Map Location 147,363,133 - 147,506,697
singlet/doubletdoublet
Overlap geneNppa, Clcn6, Mthfr, LOC433806, Agtrap, 2610109H07Rik
Upstream geneLOC100043034, LOC666514, LOC100041561, LOC100041570, OTTMUSG00000010657, LOC384087, LOC666546, LOC666557, LOC545716, LOC666574, LOC666581, EG666588, LOC627701, OTTMUSG00000010671, LOC545718, OTTMUSG00000010673, 2610305D13Rik, LOC666618, LOC100043100, LOC666640, LOC194189, LOC666652, LOC100041677, LOC277692, MGC67181, D4Wsu114e, Fv1, Mfn2, Plod1, 2510039O18Rik, Nppb
Downstream geneMad2l2, Fbxo6, Fbxo44, Fbxo2, Ptchd2, Ubiad1, Frap1, Angptl7, Exosc10, LOC100043151, Srm, Masp2, Tardbp, Gm572, LOC100041733, LOC100041742, LOC100041755, Casz1, Pex14, LOC670864, Dffa, Cort, Apitd1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-212O20.bB6Ng01-212O20.g
ACCGA030598GA030599
length244989
definitionB6Ng01-212O20.b B6Ng01-212O20.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(147,363,133 - 147,363,376)(147,505,721 - 147,506,697)
sequence
catccctggtgccgcataaacaggggttgctacatgtgtgtataattcca
gaacgcaagaggtagaggatcagttttgggccttcctaagctacatggga
agtatgctggttaggtctttttgttgtttggttgtttggttgtttggttg
gttagttggtttgattgcttgtttttttttttttttttttttttgggttg
tttggactgtccatttgacttggggcacggtcgtcttggaagaa
gaattcctttttaggaccagttaacatccccttctcctgaaggaccacag
tgtgtttgtactctcatctgctgatggacatttggatctgctttggccaa
tcaactgacccatcttacagatagggaaaccgaggccccacgtcaccata
atctggatggggtaggagcctagtcctctcctgagtcactcttggaagaa
cctggaggaacagagtcccacacttgggtaacaggcagagcaacatttgg
gactgcctccaaggggcatctactggccatgcacaccaggctactgccca
atccttgaagagcccccctccctgcttactacttcctcccctaagtccag
tctcttttctgctacagtttctaactgttctgcctgtatttttgtttgtt
tgtttgagataagatctctctcaagtcctggaactcagtgctaggagcct
gcgaaactgactttgcttttactctattgcagtctattctctcgagtttg
agttgtgtccagtaggtactcacagaagcagttttagcacctagcttctc
accaagctgtttctgttgccggccatggtcatgtgatagcttcaacaatg
gcaatggtttaatttccctggagcctcttctgcgggctgggaggttcagg
acatttttcttacacagacctctgccattaagcctttaatccagagttcc
atacaatgacccactcgaagaaattaatttgccttaggttatcctttggc
actggaggaggaatcttgcctgatgcggaactgcactaccaaacctctaa
gccacagtttgtcacactggaaatggaagcctccccttcttcccacgtgc
ccaggtccgccccattactcttttgatctttgcaatgtcggccggccctc
attgacccccgttgtgagtattggggggccgtgggaaccgtaacccaaca
tttcccggaactccaagggtcgggcaggacaaccccgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_147363133_147363376
seq2: B6Ng01-212O20.b_50_293

seq1  CATCCCTGGTGCCGCATAAACAGGGGTTGCTACATGTGTGTATAATTCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCTGGTGCCGCATAAACAGGGGTTGCTACATGTGTGTATAATTCCA  50

seq1  GAACGCAAGAGGTAGAGGATCAGTTTTGGGCCTTCCTAAGCTACATGGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACGCAAGAGGTAGAGGATCAGTTTTGGGCCTTCCTAAGCTACATGGGA  100

seq1  AGTATGCTGGTTAGGTCTTTTTGTTGTTTGGTTGTTTGGTTGTTTGGTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGCTGGTTAGGTCTTTTTGTTGTTTGGTTGTTTGGTTGTTTGGTTG  150

seq1  GTTAGTTGGTTTGATTGCTTGTTTTTTTTTTTTTTTTTTTTTTTGGTTTG  200
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GTTAGTTGGTTTGATTGCTTGTTTTTTTTTTTTTTTTTTTTTTTGGGTTG  200

seq1  TTTGGTCTGTCGATTTGACTTGGGGCAGGGTCGTCTGGGAAGAA  244
      ||||| ||||| ||||||||||||||| |||||||| |||||||
seq2  TTTGGACTGTCCATTTGACTTGGGGCACGGTCGTCTTGGAAGAA  244

seq1: chr4_147505721_147506697
seq2: B6Ng01-212O20.g_73_1061 (reverse)

seq1  TGCGGGG-TGTCCTG-CCGACCCTGGGAG-TCCGGG-AATGTTGGGTTAC  46
      ||||||| ||||||| |||||||| |||| |||||| |||||||||||||
seq2  TGCGGGGTTGTCCTGCCCGACCCTTGGAGTTCCGGGAAATGTTGGGTTAC  50

seq1  GGGTCCCACGG-CCCCCATAACTCACAAC-GGGGTCAATG-GGGCC-GCC  92
      || |||||||| ||||||  ||||||||| |||||||||| ||||| |||
seq2  GGTTCCCACGGCCCCCCAATACTCACAACGGGGGTCAATGAGGGCCGGCC  100

seq1  GACATTGCAAAGATC-AAAGAGTAATGGGGCGGACCT-GGCACGTGGGAA  140
      ||||||||||||||| ||||||||||||||||||||| ||||||||||||
seq2  GACATTGCAAAGATCAAAAGAGTAATGGGGCGGACCTGGGCACGTGGGAA  150

seq1  GAAGGGGAGGCTTCCATTTCCAGTGTGACAAACTGTGGCTTAGAGGTTTG  190
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGGAGGCTTCCATTTCCAGTGTGACAAACTGTGGCTTAGAGGTTTG  200

seq1  GTAGTGCAGTTCCGCATCAGGCAAGATTCCTCCTCCAGTGCCAAAGGATA  240
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTGCAGTTCCGCATCAGGCAAGATTCCTCCTCCAGTGCCAAAGGATA  250

seq1  ACCTAAGGCAAATTAATTTCTTCGAGTGGGTCATTGTATGGAACTCTGGA  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAAGGCAAATTAATTTCTTCGAGTGGGTCATTGTATGGAACTCTGGA  300

seq1  TTAAAGGCTTAATGGCAGAGGTCTGTGTAAGAAAAATGTCCTGAACCTCC  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGGCTTAATGGCAGAGGTCTGTGTAAGAAAAATGTCCTGAACCTCC  350

seq1  CAGCCCGCAGAAGAGGCTCCAGGGAAATTAAACCATTGCCATTGTTGAAG  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCGCAGAAGAGGCTCCAGGGAAATTAAACCATTGCCATTGTTGAAG  400

seq1  CTATCACATGACCATGGCCGGC-ACAG-AACAGCTTGGTGAGAAGCTAGG  438
      |||||||||||||||||||||| |||| ||||||||||||||||||||||
seq2  CTATCACATGACCATGGCCGGCAACAGAAACAGCTTGGTGAGAAGCTAGG  450

seq1  TGCTAAAACTGCTTCTGTGAGTACCTACTGGACACAACTCAAACTCGAGA  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAAAACTGCTTCTGTGAGTACCTACTGGACACAACTCAAACTCGAGA  500

seq1  GAATAGACTGCAATAGAGTAAAAGCAAAGTCAGTTTCGCAGGCTCCTAGC  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGACTGCAATAGAGTAAAAGCAAAGTCAGTTTCGCAGGCTCCTAGC  550

seq1  ACTGAGTTCCAGGACTTGAGAGAGATCTTATCTCAAACAAACAAACAAAA  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGTTCCAGGACTTGAGAGAGATCTTATCTCAAACAAACAAACAAAA  600

seq1  ATACAGGCAGAACAGTTAGAAACTGTAGCAGAAAAGAGACTGGACTTAGG  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGGCAGAACAGTTAGAAACTGTAGCAGAAAAGAGACTGGACTTAGG  650

seq1  GGAGGAAGTAGTAAGCAGGGAGGGGGGCTCTTCAAGGATTGGGCAGTAGC  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAAGTAGTAAGCAGGGAGGGGGGCTCTTCAAGGATTGGGCAGTAGC  700

seq1  CTGGTGTGCATGGCCAGTAGATGCCCCTTGGAGGCAGTCCCAAATGTTGC  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGTGCATGGCCAGTAGATGCCCCTTGGAGGCAGTCCCAAATGTTGC  750

seq1  TCTGCCTGTTACCCAAGTGTGGGACTCTGTTCCTCCAGGTTCTTCCAAGA  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTGTTACCCAAGTGTGGGACTCTGTTCCTCCAGGTTCTTCCAAGA  800

seq1  GTGACTCAGGAGAGGACTAGGCTCCTACCCCATCCAGATTATGGTGACGT  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTCAGGAGAGGACTAGGCTCCTACCCCATCCAGATTATGGTGACGT  850

seq1  GGGGCCTCGGTTTCCCTATCTGTAAGATGGGTCAGTTGATTGGCCAAAGC  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCCTCGGTTTCCCTATCTGTAAGATGGGTCAGTTGATTGGCCAAAGC  900

seq1  AGATCCAAATGTCCATCAGCAGATGAGAGTACAAACACACTGTGGTCCTT  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCCAAATGTCCATCAGCAGATGAGAGTACAAACACACTGTGGTCCTT  950

seq1  CAGGAGAAGGGGATGTTAACTGGTCCTAAAAAGGAATTC  977
      |||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGAAGGGGATGTTAACTGGTCCTAAAAAGGAATTC  989